Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_15780

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,442,906	+		OKGIIK_15770	0.85	-0.5
3,442,907	-		OKGIIK_15770	0.85	+0.3
3,443,154	+				-0.5
3,443,154	+				-1.7
3,443,154	+				-0.5
3,443,154	+				-0.9
3,443,155	-				-1.2
3,443,155	-				+0.3
3,443,155	-				-0.5
3,443,155	-				-1.3
3,443,155	-				-1.3
3,443,155	-				-1.3
3,443,155	-				-1.5
3,443,155	-				-0.5
3,443,202	+		OKGIIK_15775	0.11	-2.4
3,443,260	+		OKGIIK_15775	0.23	-0.8
3,443,260	+		OKGIIK_15775	0.23	-1.6
3,443,261	-		OKGIIK_15775	0.23	+0.8
3,443,261	-		OKGIIK_15775	0.23	-0.5
3,443,298	+		OKGIIK_15775	0.31	-2.1
3,443,298	+		OKGIIK_15775	0.31	-1.3
3,443,299	-		OKGIIK_15775	0.31	+0.2
3,443,299	-		OKGIIK_15775	0.31	-0.8
3,443,299	-		OKGIIK_15775	0.31	-0.9
3,443,299	-		OKGIIK_15775	0.31	+0.8
3,443,387	+		OKGIIK_15775	0.49	-0.5
3,443,387	+		OKGIIK_15775	0.49	-1.5
3,443,387	+		OKGIIK_15775	0.49	-0.8
3,443,388	-		OKGIIK_15775	0.49	-1.8
3,443,388	-		OKGIIK_15775	0.49	-0.5
3,443,388	-		OKGIIK_15775	0.49	-0.5
3,443,388	-		OKGIIK_15775	0.49	-1.1
3,443,392	+		OKGIIK_15775	0.50	-1.5
3,443,393	-		OKGIIK_15775	0.50	-1.3
3,443,393	-		OKGIIK_15775	0.50	-1.4
3,443,393	-		OKGIIK_15775	0.50	-1.2
3,443,393	-		OKGIIK_15775	0.50	+0.2
3,443,393	-		OKGIIK_15775	0.50	+0.4
3,443,400	+		OKGIIK_15775	0.52	-1.7
3,443,400	+		OKGIIK_15775	0.52	-0.8
3,443,400	+		OKGIIK_15775	0.52	-1.3
3,443,401	-		OKGIIK_15775	0.52	-0.5
3,443,401	-		OKGIIK_15775	0.52	-0.9
3,443,534	+		OKGIIK_15775	0.79	+0.2
3,443,598	+				-0.5
3,443,599	-				-0.5
3,443,599	-				-0.3
3,443,599	-				-0.9
3,443,620	+				-0.4
3,443,620	+				-1.3
3,443,620	+				-0.8
3,443,620	+				-2.2
3,443,620	+				-0.3
3,443,621	-				-0.3
3,443,621	-				-0.5
3,443,621	-				-1.5
3,443,621	-				+0.4
3,443,621	-				-2.0
3,443,621	-				-0.8
3,443,621	-				-1.0
3,443,662	+				-0.9
3,443,662	+				+0.3
3,443,663	-				-0.8
3,443,849	+				-0.5
3,443,849	+				-1.5
3,443,849	+				-1.1
3,443,849	+				+0.5
3,443,849	+				-0.3
3,443,849	+				-0.5
3,443,849	+				-0.8
3,443,849	+				-1.5
3,443,849	+				-0.5
3,443,849	+				-1.1
3,443,849	+				+0.7
3,443,849	+				-2.4
3,443,849	+				+0.5
3,443,849	+				-1.5
3,443,849	+				-1.6
3,443,850	-				-0.5
3,443,850	-				-1.9
3,443,850	-				-0.5
3,443,850	-				-1.5
3,443,850	-				-1.9
3,443,850	-				-0.8
3,443,850	-				-1.1
3,443,850	-				-1.4
3,443,850	-				-0.1
3,443,850	-				-1.0
3,443,850	-				+0.5
3,443,850	-				-0.3
3,443,850	-				-1.3
3,443,850	-				-1.3
3,443,850	-				-0.5
3,443,850	-				-0.5
3,443,850	-				-0.8
3,443,850	-				+0.5
3,443,850	-				-2.1
3,443,850	-				+0.4
3,443,850	-				-1.5
3,444,023	+	glpG	OKGIIK_15780	0.19	-1.3
3,444,257	+	glpG	OKGIIK_15780	0.53	+0.1
3,444,257	+	glpG	OKGIIK_15780	0.53	-1.5
3,444,258	-	glpG	OKGIIK_15780	0.53	-1.1
3,444,258	-	glpG	OKGIIK_15780	0.53	-1.6
3,444,258	-	glpG	OKGIIK_15780	0.53	-1.6
3,444,306	+	glpG	OKGIIK_15780	0.60	-1.1
3,444,306	+	glpG	OKGIIK_15780	0.60	-1.1
3,444,337	+	glpG	OKGIIK_15780	0.64	-2.4
3,444,337	+	glpG	OKGIIK_15780	0.64	-2.3
3,444,337	+	glpG	OKGIIK_15780	0.64	-0.1
3,444,337	+	glpG	OKGIIK_15780	0.64	-1.8
3,444,337	+	glpG	OKGIIK_15780	0.64	-2.5
3,444,337	+	glpG	OKGIIK_15780	0.64	-0.8
3,444,337	+	glpG	OKGIIK_15780	0.64	-1.3
3,444,337	+	glpG	OKGIIK_15780	0.64	-0.5
3,444,337	+	glpG	OKGIIK_15780	0.64	+0.8
3,444,337	+	glpG	OKGIIK_15780	0.64	+0.2
3,444,337	+	glpG	OKGIIK_15780	0.64	-1.5
3,444,337	+	glpG	OKGIIK_15780	0.64	-0.3
3,444,337	+	glpG	OKGIIK_15780	0.64	-0.5
3,444,337	+	glpG	OKGIIK_15780	0.64	-1.8
3,444,338	-	glpG	OKGIIK_15780	0.65	+0.2
3,444,338	-	glpG	OKGIIK_15780	0.65	-0.5
3,444,338	-	glpG	OKGIIK_15780	0.65	+0.7
3,444,338	-	glpG	OKGIIK_15780	0.65	-0.3
3,444,338	-	glpG	OKGIIK_15780	0.65	-0.3
3,444,338	-	glpG	OKGIIK_15780	0.65	-0.9
3,444,338	-	glpG	OKGIIK_15780	0.65	-1.6
3,444,338	-	glpG	OKGIIK_15780	0.65	-0.5
3,444,338	-	glpG	OKGIIK_15780	0.65	-1.6
3,444,391	+	glpG	OKGIIK_15780	0.72	-0.3
3,444,391	+	glpG	OKGIIK_15780	0.72	-1.1
3,444,391	+	glpG	OKGIIK_15780	0.72	-0.8
3,444,391	+	glpG	OKGIIK_15780	0.72	-1.6
3,444,391	+	glpG	OKGIIK_15780	0.72	-1.5
3,444,391	+	glpG	OKGIIK_15780	0.72	-2.5
3,444,392	-	glpG	OKGIIK_15780	0.73	-0.8
3,444,392	-	glpG	OKGIIK_15780	0.73	-1.5
3,444,392	-	glpG	OKGIIK_15780	0.73	-0.9
3,444,432	+	glpG	OKGIIK_15780	0.78	+0.9
3,444,433	-	glpG	OKGIIK_15780	0.79	+0.1
3,444,463	+	glpG	OKGIIK_15780	0.83	-3.3
3,444,463	+	glpG	OKGIIK_15780	0.83	-0.8
3,444,463	+	glpG	OKGIIK_15780	0.83	-4.0
3,444,463	+	glpG	OKGIIK_15780	0.83	-2.7
3,444,464	-	glpG	OKGIIK_15780	0.83	-0.5
3,444,464	-	glpG	OKGIIK_15780	0.83	-1.3
3,444,464	-	glpG	OKGIIK_15780	0.83	+0.2
3,444,478	+	glpG	OKGIIK_15780	0.85	-0.8
3,444,478	+	glpG	OKGIIK_15780	0.85	-0.8
3,444,478	+	glpG	OKGIIK_15780	0.85	+0.5
3,444,478	+	glpG	OKGIIK_15780	0.85	-2.3
3,444,478	+	glpG	OKGIIK_15780	0.85	+0.5
3,444,478	+	glpG	OKGIIK_15780	0.85	-0.5
3,444,479	-	glpG	OKGIIK_15780	0.85	-1.6
3,444,479	-	glpG	OKGIIK_15780	0.85	-1.3
3,444,479	-	glpG	OKGIIK_15780	0.85	-3.1
3,444,479	-	glpG	OKGIIK_15780	0.85	-2.2
3,444,479	-	glpG	OKGIIK_15780	0.85	-0.5
3,444,479	-	glpG	OKGIIK_15780	0.85	-0.7
3,444,479	-	glpG	OKGIIK_15780	0.85	+0.5
3,444,479	-	glpG	OKGIIK_15780	0.85	-1.1
3,444,487	+	glpG	OKGIIK_15780	0.86	-1.8
3,444,487	+	glpG	OKGIIK_15780	0.86	-0.1
3,444,487	+	glpG	OKGIIK_15780	0.86	-1.6
3,444,487	+	glpG	OKGIIK_15780	0.86	-0.8
3,444,488	-	glpG	OKGIIK_15780	0.87	-0.5
3,444,488	-	glpG	OKGIIK_15780	0.87	-0.8
3,444,488	-	glpG	OKGIIK_15780	0.87	-0.5
3,444,488	-	glpG	OKGIIK_15780	0.87	-0.5
3,444,488	-	glpG	OKGIIK_15780	0.87	-0.9
3,444,628	+				-0.2
3,444,628	+				-0.8
3,444,629	-				-2.3
3,444,629	-				-0.7
3,444,629	-				-1.3
3,444,668	+		OKGIIK_15785	0.12	-0.8
3,444,668	+		OKGIIK_15785	0.12	-1.5
3,444,668	+		OKGIIK_15785	0.12	+1.2
3,444,669	-		OKGIIK_15785	0.12	-2.5
3,444,669	-		OKGIIK_15785	0.12	-0.8
3,444,725	+		OKGIIK_15785	0.19	-1.3
3,444,725	+		OKGIIK_15785	0.19	-0.9
3,444,725	+		OKGIIK_15785	0.19	-0.4
3,444,725	+		OKGIIK_15785	0.19	-0.8
3,444,725	+		OKGIIK_15785	0.19	-0.9
3,444,725	+		OKGIIK_15785	0.19	-2.1
3,444,725	+		OKGIIK_15785	0.19	-0.1
3,444,725	+		OKGIIK_15785	0.19	-0.3
3,444,725	+		OKGIIK_15785	0.19	+0.2
3,444,725	+		OKGIIK_15785	0.19	-2.4
3,444,725	+		OKGIIK_15785	0.19	-0.8
3,444,725	+		OKGIIK_15785	0.19	-0.5
3,444,726	-		OKGIIK_15785	0.20	-2.6
3,444,726	-		OKGIIK_15785	0.20	+1.1
3,444,726	-		OKGIIK_15785	0.20	+0.4
3,444,726	-		OKGIIK_15785	0.20	-0.2
3,444,726	-		OKGIIK_15785	0.20	+0.2
3,444,726	-		OKGIIK_15785	0.20	+1.3
3,444,726	-		OKGIIK_15785	0.20	-1.8
3,444,726	-		OKGIIK_15785	0.20	-0.2
3,444,726	-		OKGIIK_15785	0.20	-2.1
3,444,726	-		OKGIIK_15785	0.20	-1.6
3,444,726	-		OKGIIK_15785	0.20	-0.5
3,444,726	-		OKGIIK_15785	0.20	-0.7
3,444,726	-		OKGIIK_15785	0.20	-0.7
3,444,726	-		OKGIIK_15785	0.20	-0.8
3,444,726	-		OKGIIK_15785	0.20	-2.3
3,444,726	-		OKGIIK_15785	0.20	-1.1
3,444,788	+		OKGIIK_15785	0.28	-0.5
3,444,789	-		OKGIIK_15785	0.28	+0.2
3,444,876	+		OKGIIK_15785	0.40	+1.3
3,444,876	+		OKGIIK_15785	0.40	-0.8
3,444,876	+		OKGIIK_15785	0.40	-1.3
3,444,876	+		OKGIIK_15785	0.40	+0.5
3,444,876	+		OKGIIK_15785	0.40	-0.5
3,444,876	+		OKGIIK_15785	0.40	-2.4
3,444,876	+		OKGIIK_15785	0.40	-1.8
3,444,876	+		OKGIIK_15785	0.40	+0.2
3,444,980	+		OKGIIK_15785	0.54	-0.9
3,444,980	+		OKGIIK_15785	0.54	+0.4
3,444,980	+		OKGIIK_15785	0.54	+0.5
3,444,981	-		OKGIIK_15785	0.55	+0.2
3,444,981	-		OKGIIK_15785	0.55	-0.1
3,445,012	+		OKGIIK_15785	0.59	-2.2
3,445,012	+		OKGIIK_15785	0.59	+0.2
3,445,012	+		OKGIIK_15785	0.59	-1.1
3,445,012	+		OKGIIK_15785	0.59	-1.2
3,445,012	+		OKGIIK_15785	0.59	-0.3
3,445,012	+		OKGIIK_15785	0.59	-0.7
3,445,012	+		OKGIIK_15785	0.59	-1.6
3,445,012	+		OKGIIK_15785	0.59	-1.0
3,445,013	-		OKGIIK_15785	0.59	-0.3
3,445,013	-		OKGIIK_15785	0.59	-0.8
3,445,013	-		OKGIIK_15785	0.59	-1.1
3,445,013	-		OKGIIK_15785	0.59	-1.5
3,445,013	-		OKGIIK_15785	0.59	-0.8
3,445,026	-		OKGIIK_15785	0.61	-2.2
3,445,026	-		OKGIIK_15785	0.61	-2.2
3,445,120	-		OKGIIK_15785	0.74	-2.1
3,445,270	-				-1.9
3,445,344	+				+1.2
3,445,345	-				-0.8
3,445,354	+				-1.1
3,445,355	-				-0.6
3,445,548	+	pulE	OKGIIK_15790	0.11	-1.5
3,445,548	+	pulE	OKGIIK_15790	0.11	-0.1
3,445,548	+	pulE	OKGIIK_15790	0.11	-1.2
3,445,548	+	pulE	OKGIIK_15790	0.11	-1.5
3,445,548	+	pulE	OKGIIK_15790	0.11	-1.8
3,445,548	+	pulE	OKGIIK_15790	0.11	-0.9
3,445,548	+	pulE	OKGIIK_15790	0.11	-0.3
3,445,549	-	pulE	OKGIIK_15790	0.11	+0.0
3,445,549	-	pulE	OKGIIK_15790	0.11	-0.3
3,445,549	-	pulE	OKGIIK_15790	0.11	+0.5