Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_15150

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,293,001	+				+0.4
3,293,002	-				+0.3
3,293,002	-				-1.4
3,293,202	+	ccmA	OKGIIK_15145	0.30	+1.7
3,293,202	+	ccmA	OKGIIK_15145	0.30	-1.1
3,293,202	+	ccmA	OKGIIK_15145	0.30	-1.4
3,293,202	+	ccmA	OKGIIK_15145	0.30	-0.1
3,293,203	-	ccmA	OKGIIK_15145	0.30	+1.6
3,293,203	-	ccmA	OKGIIK_15145	0.30	-0.1
3,293,203	-	ccmA	OKGIIK_15145	0.30	-0.8
3,293,203	-	ccmA	OKGIIK_15145	0.30	-1.2
3,293,275	-	ccmA	OKGIIK_15145	0.38	+0.5
3,293,625	+	ccmA	OKGIIK_15145	0.78	-1.2
3,293,625	+	ccmA	OKGIIK_15145	0.78	-1.5
3,293,625	+	ccmA	OKGIIK_15145	0.78	-1.5
3,293,626	-	ccmA	OKGIIK_15145	0.78	-0.3
3,293,709	+	ccmA	OKGIIK_15145	0.87	+0.5
3,293,711	+	ccmA	OKGIIK_15145	0.87	-1.1
3,293,711	+	ccmA	OKGIIK_15145	0.87	+0.3
3,293,711	+	ccmA	OKGIIK_15145	0.87	-1.9
3,293,711	+	ccmA	OKGIIK_15145	0.87	-0.1
3,293,711	+	ccmA	OKGIIK_15145	0.87	-0.1
3,293,711	+	ccmA	OKGIIK_15145	0.87	-0.6
3,293,712	-	ccmA	OKGIIK_15145	0.87	-0.1
3,293,712	-	ccmA	OKGIIK_15145	0.87	-0.5
3,293,712	-	ccmA	OKGIIK_15145	0.87	-0.7
3,293,712	-	ccmA	OKGIIK_15145	0.87	+0.5
3,293,847	+				+0.3
3,293,847	+				+0.6
3,293,848	-				+0.3
3,293,848	-				+0.8
3,293,848	-				+0.3
3,293,848	-				+1.3
3,293,848	-				-0.7
3,293,855	+				+0.5
3,293,889	+				+0.2
3,293,889	+				-0.7
3,293,889	+				-0.1
3,293,889	+				-0.1
3,293,889	+				-0.3
3,293,889	+				+0.7
3,293,889	+				-0.2
3,293,889	+				+0.7
3,293,889	+				+0.9
3,293,890	-				+2.3
3,293,890	-				+0.3
3,293,890	-				-0.2
3,293,890	-				-1.1
3,293,890	-				+1.1
3,293,890	-				-0.9
3,293,890	-				-3.2
3,293,890	-				-1.4
3,293,890	-				-0.1
3,293,890	-				-1.9
3,293,890	-				+0.2
3,293,978	+		OKGIIK_15150	0.16	-0.4
3,293,978	+		OKGIIK_15150	0.16	-1.7
3,293,978	+		OKGIIK_15150	0.16	+1.7
3,293,978	+		OKGIIK_15150	0.16	+2.1
3,293,979	-		OKGIIK_15150	0.16	-0.5
3,293,979	-		OKGIIK_15150	0.16	-0.3
3,293,979	-		OKGIIK_15150	0.16	-0.5
3,293,979	-		OKGIIK_15150	0.16	-1.2
3,293,979	-		OKGIIK_15150	0.16	-0.1
3,293,979	-		OKGIIK_15150	0.16	+0.3
3,293,979	-		OKGIIK_15150	0.16	+1.2
3,293,979	-		OKGIIK_15150	0.16	+1.1
3,293,979	-		OKGIIK_15150	0.16	+0.9
3,294,101	+		OKGIIK_15150	0.29	+1.5
3,294,102	-		OKGIIK_15150	0.29	-2.2
3,294,227	+		OKGIIK_15150	0.42	+0.9
3,294,228	-		OKGIIK_15150	0.42	+0.2
3,294,228	-		OKGIIK_15150	0.42	+0.6
3,294,587	+		OKGIIK_15150	0.78	-0.4
3,294,588	-		OKGIIK_15150	0.79	-0.7
3,294,588	-		OKGIIK_15150	0.79	-0.1
3,294,657	+		OKGIIK_15150	0.86	+0.3
3,294,657	+		OKGIIK_15150	0.86	-0.5
3,294,657	+		OKGIIK_15150	0.86	-0.7
3,294,658	-		OKGIIK_15150	0.86	-0.4
3,294,658	-		OKGIIK_15150	0.86	+0.5
3,294,658	-		OKGIIK_15150	0.86	-2.2
3,294,658	-		OKGIIK_15150	0.86	+0.3
3,294,658	-		OKGIIK_15150	0.86	-1.2
3,294,658	-		OKGIIK_15150	0.86	-1.1
3,294,680	+		OKGIIK_15150	0.88	-0.1
3,294,680	+		OKGIIK_15150	0.88	+0.4
3,294,681	-		OKGIIK_15150	0.88	+0.1
3,294,681	-		OKGIIK_15150	0.88	-1.4
3,294,706	+				+2.3
3,294,706	+				+0.3
3,294,706	+				+0.6
3,294,706	+				-0.8
3,294,706	+				-0.5
3,294,706	+				-1.2
3,294,706	+				+1.5
3,294,706	+				-1.5
3,294,706	+				-0.7
3,294,707	-				+0.3
3,294,707	-				+0.4
3,294,714	+				+0.3
3,294,714	+				+0.3
3,294,714	+				+0.7
3,294,714	+				-0.7
3,294,714	+				-0.1
3,294,714	+				-1.5
3,294,714	+				+0.5
3,294,714	+				-1.6
3,294,714	+				+0.8
3,294,715	-				-1.4
3,294,715	-				-0.1
3,294,715	-				-0.2
3,294,715	-				+0.3
3,294,715	-				+0.5
3,294,715	-				-0.2
3,294,715	-				+0.3
3,294,715	-				+1.9
3,294,715	-				-0.1
3,294,715	-				+0.3
3,294,715	-				-1.7
3,294,724	+				-0.9
3,294,933	+		OKGIIK_15155	0.24	-0.1
3,294,934	-		OKGIIK_15155	0.24	-0.7
3,294,934	-		OKGIIK_15155	0.24	-0.5
3,294,996	+		OKGIIK_15155	0.37	-0.1
3,294,996	+		OKGIIK_15155	0.37	+0.9
3,294,996	+		OKGIIK_15155	0.37	-0.1
3,294,996	+		OKGIIK_15155	0.37	-0.3
3,294,996	+		OKGIIK_15155	0.37	+0.3
3,294,996	+		OKGIIK_15155	0.37	+0.7
3,294,997	-		OKGIIK_15155	0.37	+0.8
3,294,997	-		OKGIIK_15155	0.37	+0.5
3,294,997	-		OKGIIK_15155	0.37	-1.4
3,295,126	+		OKGIIK_15155	0.64	+0.3
3,295,126	+		OKGIIK_15155	0.64	-0.3
3,295,126	+		OKGIIK_15155	0.64	+0.4
3,295,126	+		OKGIIK_15155	0.64	-0.3
3,295,126	+		OKGIIK_15155	0.64	-1.1
3,295,126	+		OKGIIK_15155	0.64	+1.3
3,295,126	+		OKGIIK_15155	0.64	+2.0
3,295,126	+		OKGIIK_15155	0.64	-2.3
3,295,126	+		OKGIIK_15155	0.64	-0.9
3,295,127	-		OKGIIK_15155	0.64	-2.0
3,295,127	-		OKGIIK_15155	0.64	-0.9
3,295,127	-		OKGIIK_15155	0.64	+0.4
3,295,127	-		OKGIIK_15155	0.64	+1.0
3,295,127	-		OKGIIK_15155	0.64	+1.0
3,295,127	-		OKGIIK_15155	0.64	-0.9
3,295,127	-		OKGIIK_15155	0.64	-0.5
3,295,127	-		OKGIIK_15155	0.64	+0.3
3,295,127	-		OKGIIK_15155	0.64	+0.5
3,295,127	-		OKGIIK_15155	0.64	-0.5
3,295,512	+	splB	OKGIIK_15160	0.16	+1.3
3,295,512	+	splB	OKGIIK_15160	0.16	+0.5
3,295,636	-	splB	OKGIIK_15160	0.27	-0.7
3,295,636	-	splB	OKGIIK_15160	0.27	+0.4
3,295,636	-	splB	OKGIIK_15160	0.27	-0.8
3,295,676	+	splB	OKGIIK_15160	0.30	+0.1