Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_15045

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,273,707	+				+0.3
3,273,707	+				-1.1
3,273,707	+				+1.1
3,273,707	+				-1.0
3,273,707	+				-1.4
3,273,708	-				-0.3
3,273,708	-				+0.0
3,273,708	-				-0.9
3,273,708	-				-0.6
3,273,708	-				-1.3
3,273,708	-				-0.2
3,273,717	+				-0.2
3,273,717	+				-0.2
3,273,718	-				+0.3
3,273,718	-				-1.3
3,273,718	-				-2.1
3,273,718	-				-0.6
3,273,719	+				-1.7
3,273,719	+				-1.5
3,273,719	+				+0.6
3,273,719	+				-1.5
3,273,719	+				+1.4
3,273,719	+				+0.4
3,273,719	+				-0.5
3,273,719	+				-1.7
3,273,719	+				-0.6
3,273,720	-				-0.5
3,273,720	-				-0.3
3,273,720	-				-1.1
3,273,720	-				-1.3
3,273,720	-				+0.3
3,273,720	-				-0.1
3,273,720	-				-1.5
3,273,720	-				-0.8
3,273,720	-				+0.0
3,273,720	-				-1.4
3,273,720	-				-0.3
3,273,720	-				-0.4
3,273,720	-				-1.2
3,273,720	-				+0.3
3,273,882	+	yheT	OKGIIK_15040	0.22	-0.1
3,273,882	+	yheT	OKGIIK_15040	0.22	-0.1
3,273,883	-	yheT	OKGIIK_15040	0.22	-0.3
3,273,883	-	yheT	OKGIIK_15040	0.22	+0.3
3,273,883	-	yheT	OKGIIK_15040	0.22	-1.3
3,273,883	-	yheT	OKGIIK_15040	0.22	-0.3
3,273,883	-	yheT	OKGIIK_15040	0.22	-0.1
3,273,902	+	yheT	OKGIIK_15040	0.24	-0.3
3,273,914	+	yheT	OKGIIK_15040	0.25	+0.1
3,273,914	+	yheT	OKGIIK_15040	0.25	-0.5
3,273,914	+	yheT	OKGIIK_15040	0.25	-1.4
3,273,914	+	yheT	OKGIIK_15040	0.25	-2.3
3,273,914	+	yheT	OKGIIK_15040	0.25	-0.5
3,273,915	-	yheT	OKGIIK_15040	0.25	+0.3
3,273,915	-	yheT	OKGIIK_15040	0.25	+0.0
3,273,915	-	yheT	OKGIIK_15040	0.25	+0.3
3,273,917	-	yheT	OKGIIK_15040	0.26	-0.3
3,273,939	+	yheT	OKGIIK_15040	0.28	-1.2
3,273,939	+	yheT	OKGIIK_15040	0.28	-0.3
3,273,939	+	yheT	OKGIIK_15040	0.28	-1.5
3,273,939	+	yheT	OKGIIK_15040	0.28	+2.3
3,273,940	-	yheT	OKGIIK_15040	0.28	-0.5
3,274,005	-	yheT	OKGIIK_15040	0.34	-2.2
3,274,005	-	yheT	OKGIIK_15040	0.34	-0.4
3,274,005	-	yheT	OKGIIK_15040	0.34	-0.9
3,274,011	-	yheT	OKGIIK_15040	0.35	+1.3
3,274,067	+	yheT	OKGIIK_15040	0.40	+0.3
3,274,067	+	yheT	OKGIIK_15040	0.40	-0.1
3,274,067	+	yheT	OKGIIK_15040	0.40	-0.7
3,274,067	+	yheT	OKGIIK_15040	0.40	-2.3
3,274,067	+	yheT	OKGIIK_15040	0.40	-0.4
3,274,067	+	yheT	OKGIIK_15040	0.40	+0.2
3,274,067	+	yheT	OKGIIK_15040	0.40	-0.3
3,274,067	+	yheT	OKGIIK_15040	0.40	-1.2
3,274,067	+	yheT	OKGIIK_15040	0.40	+0.5
3,274,067	+	yheT	OKGIIK_15040	0.40	-0.7
3,274,068	-	yheT	OKGIIK_15040	0.40	-1.0
3,274,068	-	yheT	OKGIIK_15040	0.40	-2.0
3,274,068	-	yheT	OKGIIK_15040	0.40	+0.7
3,274,068	-	yheT	OKGIIK_15040	0.40	-0.7
3,274,076	+	yheT	OKGIIK_15040	0.41	-1.7
3,274,076	+	yheT	OKGIIK_15040	0.41	-0.1
3,274,077	-	yheT	OKGIIK_15040	0.41	-0.7
3,274,077	-	yheT	OKGIIK_15040	0.41	-1.3
3,274,077	-	yheT	OKGIIK_15040	0.41	-0.6
3,274,151	+	yheT	OKGIIK_15040	0.49	+0.1
3,274,151	+	yheT	OKGIIK_15040	0.49	+0.3
3,274,151	+	yheT	OKGIIK_15040	0.49	-0.7
3,274,151	+	yheT	OKGIIK_15040	0.49	+0.1
3,274,151	+	yheT	OKGIIK_15040	0.49	-0.9
3,274,151	+	yheT	OKGIIK_15040	0.49	-2.3
3,274,151	+	yheT	OKGIIK_15040	0.49	-0.6
3,274,151	+	yheT	OKGIIK_15040	0.49	+1.5
3,274,151	+	yheT	OKGIIK_15040	0.49	-1.8
3,274,151	+	yheT	OKGIIK_15040	0.49	-0.5
3,274,151	+	yheT	OKGIIK_15040	0.49	+0.1
3,274,151	+	yheT	OKGIIK_15040	0.49	-1.4
3,274,151	+	yheT	OKGIIK_15040	0.49	-2.3
3,274,151	+	yheT	OKGIIK_15040	0.49	-1.7
3,274,151	+	yheT	OKGIIK_15040	0.49	+0.5
3,274,151	+	yheT	OKGIIK_15040	0.49	-0.1
3,274,151	+	yheT	OKGIIK_15040	0.49	-1.9
3,274,151	+	yheT	OKGIIK_15040	0.49	+0.3
3,274,151	+	yheT	OKGIIK_15040	0.49	-1.6
3,274,152	-	yheT	OKGIIK_15040	0.49	-2.3
3,274,152	-	yheT	OKGIIK_15040	0.49	+0.3
3,274,152	-	yheT	OKGIIK_15040	0.49	+0.3
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.3
3,274,152	-	yheT	OKGIIK_15040	0.49	-1.3
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.3
3,274,152	-	yheT	OKGIIK_15040	0.49	+0.3
3,274,152	-	yheT	OKGIIK_15040	0.49	-1.4
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.7
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.5
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.5
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.5
3,274,152	-	yheT	OKGIIK_15040	0.49	+0.5
3,274,152	-	yheT	OKGIIK_15040	0.49	+0.3
3,274,152	-	yheT	OKGIIK_15040	0.49	+0.7
3,274,152	-	yheT	OKGIIK_15040	0.49	+0.3
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.5
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.9
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.4
3,274,152	-	yheT	OKGIIK_15040	0.49	-2.1
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.9
3,274,152	-	yheT	OKGIIK_15040	0.49	-2.2
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.1
3,274,152	-	yheT	OKGIIK_15040	0.49	-1.8
3,274,152	-	yheT	OKGIIK_15040	0.49	-2.3
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.8
3,274,152	-	yheT	OKGIIK_15040	0.49	-1.1
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.4
3,274,152	-	yheT	OKGIIK_15040	0.49	+1.1
3,274,152	-	yheT	OKGIIK_15040	0.49	-1.5
3,274,152	-	yheT	OKGIIK_15040	0.49	-1.3
3,274,152	-	yheT	OKGIIK_15040	0.49	-0.7
3,274,152	-	yheT	OKGIIK_15040	0.49	+0.3
3,274,409	+	yheT	OKGIIK_15040	0.74	+1.9
3,274,409	+	yheT	OKGIIK_15040	0.74	+0.6
3,274,409	+	yheT	OKGIIK_15040	0.74	-0.2
3,274,409	+	yheT	OKGIIK_15040	0.74	-0.9
3,274,409	+	yheT	OKGIIK_15040	0.74	-0.9
3,274,409	+	yheT	OKGIIK_15040	0.74	-1.8
3,274,409	+	yheT	OKGIIK_15040	0.74	+1.0
3,274,409	+	yheT	OKGIIK_15040	0.74	-1.3
3,274,409	+	yheT	OKGIIK_15040	0.74	+0.8
3,274,409	+	yheT	OKGIIK_15040	0.74	-1.6
3,274,410	-	yheT	OKGIIK_15040	0.74	-1.1
3,274,410	-	yheT	OKGIIK_15040	0.74	-0.7
3,274,410	-	yheT	OKGIIK_15040	0.74	-1.5
3,274,410	-	yheT	OKGIIK_15040	0.74	+2.3
3,274,410	-	yheT	OKGIIK_15040	0.74	+0.9
3,274,410	-	yheT	OKGIIK_15040	0.74	-2.8
3,274,410	-	yheT	OKGIIK_15040	0.74	+0.8
3,274,410	-	yheT	OKGIIK_15040	0.74	-0.1
3,274,410	-	yheT	OKGIIK_15040	0.74	-0.9
3,274,410	-	yheT	OKGIIK_15040	0.74	-1.1
3,274,410	-	yheT	OKGIIK_15040	0.74	-0.1
3,274,410	-	yheT	OKGIIK_15040	0.74	-1.5
3,274,410	-	yheT	OKGIIK_15040	0.74	-0.7
3,274,410	-	yheT	OKGIIK_15040	0.74	-0.9
3,274,410	-	yheT	OKGIIK_15040	0.74	-0.9
3,274,410	-	yheT	OKGIIK_15040	0.74	-0.5
3,274,410	-	yheT	OKGIIK_15040	0.74	-1.1
3,274,410	-	yheT	OKGIIK_15040	0.74	+0.8
3,274,410	-	yheT	OKGIIK_15040	0.74	-1.4
3,274,410	-	yheT	OKGIIK_15040	0.74	-1.2
3,274,410	-	yheT	OKGIIK_15040	0.74	+0.3
3,274,410	-	yheT	OKGIIK_15040	0.74	-0.6
3,274,410	-	yheT	OKGIIK_15040	0.74	+0.7
3,274,410	-	yheT	OKGIIK_15040	0.74	+0.8
3,274,410	-	yheT	OKGIIK_15040	0.74	+0.5
3,274,410	-	yheT	OKGIIK_15040	0.74	-1.4
3,274,410	-	yheT	OKGIIK_15040	0.74	+0.3
3,274,410	-	yheT	OKGIIK_15040	0.74	+0.7
3,274,410	-	yheT	OKGIIK_15040	0.74	+0.3
3,274,410	-	yheT	OKGIIK_15040	0.74	+0.3
3,274,410	-	yheT	OKGIIK_15040	0.74	-0.7
3,274,410	-	yheT	OKGIIK_15040	0.74	-0.7
3,274,488	+	yheT	OKGIIK_15040	0.82	-0.7
3,274,489	-	yheT	OKGIIK_15040	0.82	-0.6
3,274,489	-	yheT	OKGIIK_15040	0.82	-0.9
3,274,490	+	yheT	OKGIIK_15040	0.82	-0.1
3,274,490	+	yheT	OKGIIK_15040	0.82	-1.1
3,274,491	-	yheT	OKGIIK_15040	0.82	+1.3
3,274,491	-	yheT	OKGIIK_15040	0.82	-1.8
3,274,491	-	yheT	OKGIIK_15040	0.82	+0.9
3,274,491	-	yheT	OKGIIK_15040	0.82	+0.5
3,274,491	-	yheT	OKGIIK_15040	0.82	-0.7
3,274,491	-	yheT	OKGIIK_15040	0.82	-1.3
3,274,491	-	yheT	OKGIIK_15040	0.82	-0.3
3,274,491	-	yheT	OKGIIK_15040	0.82	-0.1
3,274,966	+		OKGIIK_15045	0.37	-0.6
3,275,256	+		OKGIIK_15045	0.73	+0.5
3,275,256	+		OKGIIK_15045	0.73	+0.3
3,275,256	+		OKGIIK_15045	0.73	+0.9
3,275,256	+		OKGIIK_15045	0.73	-0.1
3,275,257	-		OKGIIK_15045	0.73	+1.4
3,275,257	-		OKGIIK_15045	0.73	+0.3
3,275,257	-		OKGIIK_15045	0.73	+1.3
3,275,257	-		OKGIIK_15045	0.73	-0.9
3,275,257	-		OKGIIK_15045	0.73	-0.2
3,275,257	-		OKGIIK_15045	0.73	+0.3
3,275,459	+				+0.4
3,275,486	+				-0.1
3,275,487	-				-0.7
3,275,514	+				-0.4
3,275,515	-				+0.0
3,275,515	-				-0.6
3,275,515	-				-0.5
3,275,515	-				+0.7
3,275,660	+		OKGIIK_15050	0.15	-1.2
3,275,660	+		OKGIIK_15050	0.15	+0.8
3,275,660	+		OKGIIK_15050	0.15	-0.7
3,275,660	+		OKGIIK_15050	0.15	+0.2
3,275,660	+		OKGIIK_15050	0.15	-0.5
3,275,660	+		OKGIIK_15050	0.15	+0.5
3,275,660	+		OKGIIK_15050	0.15	-0.3
3,275,660	+		OKGIIK_15050	0.15	-1.7
3,275,660	+		OKGIIK_15050	0.15	-1.9
3,275,660	+		OKGIIK_15050	0.15	-0.3
3,275,660	+		OKGIIK_15050	0.15	-0.1
3,275,660	+		OKGIIK_15050	0.15	-0.7
3,275,660	+		OKGIIK_15050	0.15	+1.5
3,275,660	+		OKGIIK_15050	0.15	-1.3
3,275,660	+		OKGIIK_15050	0.15	+0.7
3,275,660	+		OKGIIK_15050	0.15	+0.3
3,275,660	+		OKGIIK_15050	0.15	-0.2
3,275,661	-		OKGIIK_15050	0.15	-1.1
3,275,661	-		OKGIIK_15050	0.15	+1.3
3,275,661	-		OKGIIK_15050	0.15	-1.1
3,275,661	-		OKGIIK_15050	0.15	-1.0
3,275,661	-		OKGIIK_15050	0.15	+0.8
3,275,661	-		OKGIIK_15050	0.15	-0.1
3,275,661	-		OKGIIK_15050	0.15	-0.2
3,275,661	-		OKGIIK_15050	0.15	-1.2
3,275,661	-		OKGIIK_15050	0.15	+0.3
3,275,661	-		OKGIIK_15050	0.15	+0.0
3,275,808	-		OKGIIK_15050	0.39	-1.8
3,275,865	+		OKGIIK_15050	0.49	+0.3
3,275,865	+		OKGIIK_15050	0.49	+0.7
3,275,865	+		OKGIIK_15050	0.49	+0.1
3,275,866	-		OKGIIK_15050	0.49	+0.7
3,275,866	-		OKGIIK_15050	0.49	+0.3
3,275,866	-		OKGIIK_15050	0.49	+0.1
3,275,882	+		OKGIIK_15050	0.51	+0.3
3,275,882	+		OKGIIK_15050	0.51	-1.2
3,275,882	+		OKGIIK_15050	0.51	+2.0
3,275,882	+		OKGIIK_15050	0.51	-0.5
3,275,883	-		OKGIIK_15050	0.52	-0.6
3,275,883	-		OKGIIK_15050	0.52	-0.2
3,275,883	-		OKGIIK_15050	0.52	-1.5
3,275,883	-		OKGIIK_15050	0.52	+0.4
3,275,883	-		OKGIIK_15050	0.52	-0.5
3,275,960	+		OKGIIK_15050	0.64	-2.7
3,275,960	+		OKGIIK_15050	0.64	-0.3
3,275,960	+		OKGIIK_15050	0.64	-0.2
3,275,961	-		OKGIIK_15050	0.64	-0.3
3,275,972	+		OKGIIK_15050	0.66	+0.3
3,275,972	+		OKGIIK_15050	0.66	-2.5
3,275,972	+		OKGIIK_15050	0.66	-0.0
3,275,972	+		OKGIIK_15050	0.66	-1.0
3,275,972	+		OKGIIK_15050	0.66	-0.7
3,275,973	-		OKGIIK_15050	0.66	+0.7
3,275,973	-		OKGIIK_15050	0.66	-2.1
3,275,973	-		OKGIIK_15050	0.66	+0.3
3,275,973	-		OKGIIK_15050	0.66	+0.7
3,275,973	-		OKGIIK_15050	0.66	+0.3
3,275,973	-		OKGIIK_15050	0.66	-0.2
3,275,973	-		OKGIIK_15050	0.66	+1.1
3,275,973	-		OKGIIK_15050	0.66	+0.5
3,275,973	-		OKGIIK_15050	0.66	+0.3
3,275,973	-		OKGIIK_15050	0.66	+0.7
3,275,973	-		OKGIIK_15050	0.66	+0.3
3,276,012	-		OKGIIK_15050	0.73	+1.5
3,276,012	-		OKGIIK_15050	0.73	+0.2
3,276,072	+		OKGIIK_15050	0.83	+0.2
3,276,083	+		OKGIIK_15050	0.84	+0.5
3,276,083	+		OKGIIK_15050	0.84	-0.1
3,276,083	+		OKGIIK_15050	0.84	-0.9
3,276,084	-		OKGIIK_15050	0.85	-1.5
3,276,084	-		OKGIIK_15050	0.85	-0.3
3,276,084	-		OKGIIK_15050	0.85	+1.8
3,276,213	+				+0.9
3,276,213	+				-0.3
3,276,213	+				-0.5
3,276,213	+				-0.7
3,276,214	-				-0.5
3,276,251	+				-0.3
3,276,251	+				+0.4
3,276,252	-				-0.5
3,276,252	-				+0.1
3,276,252	-				-0.4
3,276,252	-				-0.1
3,276,252	-				+0.7
3,276,253	+				-1.8
3,276,253	+				+1.3
3,276,254	-				-1.9
3,276,254	-				+2.0
3,276,283	-				-1.8
3,276,283	-				+3.6
3,276,283	-				+0.7
3,276,435	+		OKGIIK_15055	0.15	-0.2
3,276,435	+		OKGIIK_15055	0.15	+0.3
3,276,435	+		OKGIIK_15055	0.15	-1.3
3,276,435	+		OKGIIK_15055	0.15	+0.5
3,276,436	-		OKGIIK_15055	0.15	-0.4