Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14860

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,232,484	-		OKGIIK_14850	0.46	-0.3
3,232,484	-		OKGIIK_14850	0.46	-0.1
3,232,484	-		OKGIIK_14850	0.46	-0.3
3,232,557	+		OKGIIK_14850	0.58	-1.7
3,232,557	+		OKGIIK_14850	0.58	+1.3
3,232,558	-		OKGIIK_14850	0.58	+0.1
3,233,017	+	dps	OKGIIK_14855	0.26	-0.2
3,233,071	+	dps	OKGIIK_14855	0.36	-1.2
3,233,218	+	dps	OKGIIK_14855	0.63	+1.3
3,233,218	+	dps	OKGIIK_14855	0.63	+1.3
3,233,218	+	dps	OKGIIK_14855	0.63	-0.3
3,233,219	-	dps	OKGIIK_14855	0.63	-2.4
3,233,481	+				-0.7
3,233,481	+				+1.7
3,233,482	-				-0.9
3,233,482	-				-0.5
3,233,482	-				+0.5
3,233,494	-				+0.5
3,233,610	+	ssuE	OKGIIK_14860	0.24	+0.5
3,233,610	+	ssuE	OKGIIK_14860	0.24	+0.7
3,233,610	+	ssuE	OKGIIK_14860	0.24	+0.3
3,233,616	+	ssuE	OKGIIK_14860	0.25	+1.8
3,233,616	+	ssuE	OKGIIK_14860	0.25	-0.4
3,233,616	+	ssuE	OKGIIK_14860	0.25	+1.1
3,233,617	-	ssuE	OKGIIK_14860	0.25	-1.2
3,233,617	-	ssuE	OKGIIK_14860	0.25	-1.5
3,233,617	-	ssuE	OKGIIK_14860	0.25	+1.5
3,233,617	-	ssuE	OKGIIK_14860	0.25	+0.6
3,233,622	+	ssuE	OKGIIK_14860	0.26	-1.5
3,233,623	-	ssuE	OKGIIK_14860	0.26	+0.3
3,233,623	-	ssuE	OKGIIK_14860	0.26	+1.0
3,233,623	-	ssuE	OKGIIK_14860	0.26	-0.8
3,233,623	-	ssuE	OKGIIK_14860	0.26	-1.3
3,233,623	-	ssuE	OKGIIK_14860	0.26	+0.9
3,233,635	-	ssuE	OKGIIK_14860	0.28	+0.1
3,233,706	+	ssuE	OKGIIK_14860	0.41	-1.2
3,233,706	+	ssuE	OKGIIK_14860	0.41	+3.1
3,233,707	-	ssuE	OKGIIK_14860	0.41	-1.6
3,233,707	-	ssuE	OKGIIK_14860	0.41	-1.4
3,233,904	+	ssuE	OKGIIK_14860	0.75	-0.8
3,233,904	+	ssuE	OKGIIK_14860	0.75	-2.1
3,233,904	+	ssuE	OKGIIK_14860	0.75	-2.0
3,233,904	+	ssuE	OKGIIK_14860	0.75	+1.5
3,233,904	+	ssuE	OKGIIK_14860	0.75	+1.6
3,233,904	+	ssuE	OKGIIK_14860	0.75	-0.6
3,233,904	+	ssuE	OKGIIK_14860	0.75	-0.1
3,233,905	-	ssuE	OKGIIK_14860	0.76	-0.8
3,233,905	-	ssuE	OKGIIK_14860	0.76	+1.8
3,233,905	-	ssuE	OKGIIK_14860	0.76	-1.4
3,233,905	-	ssuE	OKGIIK_14860	0.76	-0.5
3,233,905	-	ssuE	OKGIIK_14860	0.76	+1.1
3,233,905	-	ssuE	OKGIIK_14860	0.76	+0.9
3,233,905	-	ssuE	OKGIIK_14860	0.76	+0.6
3,233,905	-	ssuE	OKGIIK_14860	0.76	-0.6
3,233,905	-	ssuE	OKGIIK_14860	0.76	-0.1
3,233,905	-	ssuE	OKGIIK_14860	0.76	-0.3
3,233,982	+	ssuE	OKGIIK_14860	0.89	+0.7
3,233,982	+	ssuE	OKGIIK_14860	0.89	-2.1
3,233,982	+	ssuE	OKGIIK_14860	0.89	-0.9
3,233,982	+	ssuE	OKGIIK_14860	0.89	+0.2
3,233,982	+	ssuE	OKGIIK_14860	0.89	-0.2
3,233,982	+	ssuE	OKGIIK_14860	0.89	+0.8
3,233,982	+	ssuE	OKGIIK_14860	0.89	-0.3
3,233,983	-	ssuE	OKGIIK_14860	0.89	+0.6
3,233,983	-	ssuE	OKGIIK_14860	0.89	+0.3
3,233,983	-	ssuE	OKGIIK_14860	0.89	+0.9
3,233,983	-	ssuE	OKGIIK_14860	0.89	+0.6
3,233,983	-	ssuE	OKGIIK_14860	0.89	-0.3
3,233,983	-	ssuE	OKGIIK_14860	0.89	+0.3
3,233,983	-	ssuE	OKGIIK_14860	0.89	+0.8
3,233,983	-	ssuE	OKGIIK_14860	0.89	-1.3
3,233,983	-	ssuE	OKGIIK_14860	0.89	-0.1
3,233,983	-	ssuE	OKGIIK_14860	0.89	-1.9
3,233,983	-	ssuE	OKGIIK_14860	0.89	+9.1
3,234,244	+		OKGIIK_14865	0.17	-0.4
3,234,244	+		OKGIIK_14865	0.17	+0.9
3,234,245	-		OKGIIK_14865	0.17	-0.5
3,234,310	+		OKGIIK_14865	0.24	+0.0
3,234,310	+		OKGIIK_14865	0.24	+0.3
3,234,311	-		OKGIIK_14865	0.24	+0.3
3,234,311	-		OKGIIK_14865	0.24	+0.3
3,234,311	-		OKGIIK_14865	0.24	-1.4
3,234,311	-		OKGIIK_14865	0.24	-0.1
3,234,311	-		OKGIIK_14865	0.24	-0.1
3,234,311	-		OKGIIK_14865	0.24	-2.0
3,234,370	+		OKGIIK_14865	0.30	+0.0
3,234,370	+		OKGIIK_14865	0.30	+0.8
3,234,427	+		OKGIIK_14865	0.36	+1.5
3,234,427	+		OKGIIK_14865	0.36	+0.3
3,234,428	-		OKGIIK_14865	0.36	-0.3
3,234,428	-		OKGIIK_14865	0.36	+1.3
3,234,518	-		OKGIIK_14865	0.46	-0.7
3,234,520	+		OKGIIK_14865	0.46	+0.6
3,234,520	+		OKGIIK_14865	0.46	+0.3
3,234,520	+		OKGIIK_14865	0.46	+0.4
3,234,521	-		OKGIIK_14865	0.46	-0.2
3,234,521	-		OKGIIK_14865	0.46	-0.3
3,234,647	+		OKGIIK_14865	0.59	-3.0