Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14825

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,228,079	+	hutI	OKGIIK_14820	0.23	-0.1
3,228,079	+	hutI	OKGIIK_14820	0.23	+1.5
3,228,079	+	hutI	OKGIIK_14820	0.23	-0.1
3,228,079	+	hutI	OKGIIK_14820	0.23	-1.8
3,228,080	-	hutI	OKGIIK_14820	0.23	-0.3
3,228,080	-	hutI	OKGIIK_14820	0.23	+0.8
3,228,080	-	hutI	OKGIIK_14820	0.23	-1.1
3,228,251	-	hutI	OKGIIK_14820	0.37	+0.1
3,228,251	-	hutI	OKGIIK_14820	0.37	+0.6
3,228,373	+	hutI	OKGIIK_14820	0.47	-0.1
3,228,373	+	hutI	OKGIIK_14820	0.47	-1.2
3,228,374	-	hutI	OKGIIK_14820	0.47	-2.3
3,228,542	-	hutI	OKGIIK_14820	0.60	-0.1
3,228,816	+	hutI	OKGIIK_14820	0.82	+0.3
3,228,887	+	hutI	OKGIIK_14820	0.88	-0.2
3,228,887	+	hutI	OKGIIK_14820	0.88	+0.0
3,228,888	-	hutI	OKGIIK_14820	0.88	-1.3
3,228,990	+				-0.1
3,228,990	+				+0.9
3,228,994	+				-0.5
3,228,994	+				-0.5
3,228,994	+				-1.3
3,228,995	-				-1.1
3,228,995	-				-0.9
3,229,030	+				-0.5
3,229,030	+				-0.4
3,229,030	+				+0.1
3,229,030	+				-0.9
3,229,031	-				-1.2
3,229,068	+		OKGIIK_14825	0.14	+1.0
3,229,068	+		OKGIIK_14825	0.14	+2.6
3,229,068	+		OKGIIK_14825	0.14	-0.1
3,229,068	+		OKGIIK_14825	0.14	-1.3
3,229,069	-		OKGIIK_14825	0.15	+0.7
3,229,178	+				+1.1
3,229,178	+				-0.1
3,229,178	+				-0.7
3,229,179	-				+1.8
3,229,179	-				+1.7
3,229,179	-				+0.0
3,229,179	-				-2.3
3,229,179	-				+0.3
3,229,312	+		OKGIIK_14830	0.12	-0.8
3,229,312	+		OKGIIK_14830	0.12	-1.1
3,229,312	+		OKGIIK_14830	0.12	-1.2
3,229,313	-		OKGIIK_14830	0.13	+0.0
3,229,313	-		OKGIIK_14830	0.13	-1.0
3,229,313	-		OKGIIK_14830	0.13	-0.1
3,229,313	-		OKGIIK_14830	0.13	+1.4
3,229,490	+		OKGIIK_14830	0.43	-1.7
3,229,491	-		OKGIIK_14830	0.44	+0.9
3,229,491	-		OKGIIK_14830	0.44	-0.5
3,229,553	+		OKGIIK_14830	0.54	-0.5
3,229,553	+		OKGIIK_14830	0.54	+0.0
3,229,554	-		OKGIIK_14830	0.55	-0.2
3,229,554	-		OKGIIK_14830	0.55	-0.3
3,229,808	+				-0.9
3,229,808	+				-1.7
3,229,809	-				+0.7
3,229,899	+		OKGIIK_14835	0.11	+1.1
3,229,899	+		OKGIIK_14835	0.11	-2.2
3,229,899	+		OKGIIK_14835	0.11	+0.3
3,229,899	+		OKGIIK_14835	0.11	+0.1
3,229,900	-		OKGIIK_14835	0.11	-1.5
3,229,900	-		OKGIIK_14835	0.11	-2.0
3,229,900	-		OKGIIK_14835	0.11	-0.5
3,229,900	-		OKGIIK_14835	0.11	-0.5
3,229,900	-		OKGIIK_14835	0.11	-0.2
3,229,935	+		OKGIIK_14835	0.18	-1.2
3,229,936	-		OKGIIK_14835	0.19	+0.1
3,229,971	+		OKGIIK_14835	0.26	+0.7
3,229,971	+		OKGIIK_14835	0.26	-1.0
3,229,971	+		OKGIIK_14835	0.26	-0.1
3,229,971	+		OKGIIK_14835	0.26	+0.0
3,229,971	+		OKGIIK_14835	0.26	-0.3
3,229,972	-		OKGIIK_14835	0.26	-0.5
3,229,986	+		OKGIIK_14835	0.29	+1.0
3,229,986	+		OKGIIK_14835	0.29	-1.2
3,229,986	+		OKGIIK_14835	0.29	+0.9
3,229,987	-		OKGIIK_14835	0.30	+0.7
3,230,085	+		OKGIIK_14835	0.50	-0.3
3,230,085	+		OKGIIK_14835	0.50	-1.6
3,230,085	+		OKGIIK_14835	0.50	-1.0
3,230,085	+		OKGIIK_14835	0.50	-0.0
3,230,085	+		OKGIIK_14835	0.50	+1.3
3,230,085	+		OKGIIK_14835	0.50	-0.1
3,230,085	+		OKGIIK_14835	0.50	+1.6
3,230,086	-		OKGIIK_14835	0.51	-0.7
3,230,086	-		OKGIIK_14835	0.51	+0.7
3,230,086	-		OKGIIK_14835	0.51	+0.7
3,230,086	-		OKGIIK_14835	0.51	+0.8
3,230,086	-		OKGIIK_14835	0.51	-1.3
3,230,086	-		OKGIIK_14835	0.51	-1.6
3,230,086	-		OKGIIK_14835	0.51	-1.0
3,230,086	-		OKGIIK_14835	0.51	+1.3
3,230,086	-		OKGIIK_14835	0.51	-0.7
3,230,087	+		OKGIIK_14835	0.51	+0.6
3,230,094	+		OKGIIK_14835	0.52	+0.3