Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14795

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,223,320	+		OKGIIK_14790	0.33	-0.3
3,223,320	+		OKGIIK_14790	0.33	-0.5
3,223,320	+		OKGIIK_14790	0.33	-0.3
3,223,320	+		OKGIIK_14790	0.33	-0.5
3,223,320	+		OKGIIK_14790	0.33	-1.7
3,223,321	-		OKGIIK_14790	0.33	-0.3
3,223,321	-		OKGIIK_14790	0.33	-1.4
3,223,321	-		OKGIIK_14790	0.33	+1.3
3,223,321	-		OKGIIK_14790	0.33	-1.6
3,223,329	+		OKGIIK_14790	0.34	-0.3
3,223,330	-		OKGIIK_14790	0.34	-1.4
3,223,330	-		OKGIIK_14790	0.34	-0.9
3,223,330	-		OKGIIK_14790	0.34	-0.8
3,223,330	-		OKGIIK_14790	0.34	-0.7
3,223,359	+		OKGIIK_14790	0.36	-1.8
3,223,359	+		OKGIIK_14790	0.36	-0.5
3,223,359	+		OKGIIK_14790	0.36	-0.5
3,223,359	+		OKGIIK_14790	0.36	-0.3
3,223,360	-		OKGIIK_14790	0.36	-0.7
3,223,360	-		OKGIIK_14790	0.36	+0.3
3,223,360	-		OKGIIK_14790	0.36	+1.5
3,223,360	-		OKGIIK_14790	0.36	-0.1
3,223,371	+		OKGIIK_14790	0.37	+0.3
3,223,371	+		OKGIIK_14790	0.37	+0.3
3,223,371	+		OKGIIK_14790	0.37	+0.3
3,223,371	+		OKGIIK_14790	0.37	-0.9
3,223,371	+		OKGIIK_14790	0.37	+0.3
3,223,371	+		OKGIIK_14790	0.37	-0.7
3,223,371	+		OKGIIK_14790	0.37	-1.4
3,223,372	-		OKGIIK_14790	0.37	-0.2
3,223,372	-		OKGIIK_14790	0.37	-0.3
3,223,372	-		OKGIIK_14790	0.37	+1.7
3,223,372	-		OKGIIK_14790	0.37	-1.2
3,223,372	-		OKGIIK_14790	0.37	-0.7
3,223,372	-		OKGIIK_14790	0.37	-0.5
3,223,651	-		OKGIIK_14790	0.58	-1.3
3,223,651	-		OKGIIK_14790	0.58	-0.1
3,223,943	+		OKGIIK_14790	0.81	-0.8
3,223,943	+		OKGIIK_14790	0.81	-1.9
3,223,989	+		OKGIIK_14790	0.84	+0.9
3,223,989	+		OKGIIK_14790	0.84	-0.2
3,223,989	+		OKGIIK_14790	0.84	-0.3
3,223,989	+		OKGIIK_14790	0.84	-1.4
3,223,989	+		OKGIIK_14790	0.84	-0.5
3,223,989	+		OKGIIK_14790	0.84	-0.1
3,223,989	+		OKGIIK_14790	0.84	+1.3
3,223,989	+		OKGIIK_14790	0.84	-0.3
3,223,989	+		OKGIIK_14790	0.84	-0.3
3,223,989	+		OKGIIK_14790	0.84	+0.7
3,223,989	+		OKGIIK_14790	0.84	-3.0
3,223,990	-		OKGIIK_14790	0.84	+3.1
3,223,990	-		OKGIIK_14790	0.84	+1.8
3,223,990	-		OKGIIK_14790	0.84	-0.3
3,223,990	-		OKGIIK_14790	0.84	-1.2
3,223,990	-		OKGIIK_14790	0.84	+0.8
3,223,990	-		OKGIIK_14790	0.84	+0.3
3,223,990	-		OKGIIK_14790	0.84	+0.3
3,224,101	+				+0.8
3,224,101	+				-0.1
3,224,101	+				+0.5
3,224,101	+				-0.4
3,224,102	-				+0.3
3,224,236	+				-1.7
3,224,266	+				-0.1
3,224,266	+				-0.4
3,224,267	-				-2.0
3,224,581	+		OKGIIK_14795	0.71	-0.5
3,224,582	-		OKGIIK_14795	0.71	-1.8
3,224,582	-		OKGIIK_14795	0.71	-0.9
3,224,582	-		OKGIIK_14795	0.71	-1.2
3,224,582	-		OKGIIK_14795	0.71	-0.3
3,224,582	-		OKGIIK_14795	0.71	-0.3
3,224,838	-		OKGIIK_14800	0.22	-0.1
3,224,882	+		OKGIIK_14800	0.30	-0.3
3,224,882	+		OKGIIK_14800	0.30	+0.6
3,224,882	+		OKGIIK_14800	0.30	-0.5
3,224,882	+		OKGIIK_14800	0.30	+1.5
3,224,882	+		OKGIIK_14800	0.30	+0.4
3,224,883	-		OKGIIK_14800	0.31	-1.2
3,224,883	-		OKGIIK_14800	0.31	-0.3
3,224,883	-		OKGIIK_14800	0.31	-1.7
3,224,883	-		OKGIIK_14800	0.31	-1.6
3,224,883	-		OKGIIK_14800	0.31	+0.5
3,224,883	-		OKGIIK_14800	0.31	-1.2
3,224,984	+		OKGIIK_14800	0.50	-0.2
3,224,984	+		OKGIIK_14800	0.50	-1.5
3,224,984	+		OKGIIK_14800	0.50	-1.7
3,224,984	+		OKGIIK_14800	0.50	+0.1
3,224,984	+		OKGIIK_14800	0.50	-0.1
3,224,984	+		OKGIIK_14800	0.50	+0.3
3,224,984	+		OKGIIK_14800	0.50	-0.5
3,224,985	-		OKGIIK_14800	0.50	+1.5
3,224,985	-		OKGIIK_14800	0.50	+0.4
3,224,985	-		OKGIIK_14800	0.50	+0.3
3,224,985	-		OKGIIK_14800	0.50	+0.7
3,225,039	-		OKGIIK_14800	0.61	-1.3
3,225,047	+		OKGIIK_14800	0.63	-1.2
3,225,047	+		OKGIIK_14800	0.63	-1.5
3,225,047	+		OKGIIK_14800	0.63	+1.8
3,225,047	-		OKGIIK_14800	0.63	+0.9
3,225,048	-		OKGIIK_14800	0.63	+1.8
3,225,048	-		OKGIIK_14800	0.63	-1.7
3,225,048	-		OKGIIK_14800	0.63	+0.5
3,225,119	+		OKGIIK_14800	0.77	+0.4
3,225,119	+		OKGIIK_14800	0.77	-0.1
3,225,119	+		OKGIIK_14800	0.77	-2.1
3,225,120	-		OKGIIK_14800	0.77	+0.3
3,225,120	-		OKGIIK_14800	0.77	-1.5
3,225,120	-		OKGIIK_14800	0.77	-0.3
3,225,120	-		OKGIIK_14800	0.77	-0.3
3,225,120	-		OKGIIK_14800	0.77	-0.3
3,225,120	-		OKGIIK_14800	0.77	-0.8
3,225,120	-		OKGIIK_14800	0.77	-1.5
3,225,120	-		OKGIIK_14800	0.77	+0.2
3,225,328	+		OKGIIK_14805	0.16	-1.0
3,225,328	+		OKGIIK_14805	0.16	+0.3
3,225,394	+		OKGIIK_14805	0.28	+0.3
3,225,395	-		OKGIIK_14805	0.29	-1.1
3,225,451	+		OKGIIK_14805	0.39	+0.4
3,225,451	+		OKGIIK_14805	0.39	+0.3
3,225,526	+		OKGIIK_14805	0.52	+1.8
3,225,526	+		OKGIIK_14805	0.52	+0.3
3,225,526	+		OKGIIK_14805	0.52	-1.6
3,225,526	+		OKGIIK_14805	0.52	-1.1
3,225,526	+		OKGIIK_14805	0.52	+0.5
3,225,527	-		OKGIIK_14805	0.53	+1.3
3,225,527	-		OKGIIK_14805	0.53	+2.0