Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14615

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,188,203	+				-0.5
3,188,203	+				-0.1
3,188,203	+				-1.1
3,188,203	+				-1.0
3,188,216	+				-1.6
3,188,216	+				-0.2
3,188,216	+				-0.1
3,188,216	+				-1.1
3,188,216	+				+1.7
3,188,216	+				-1.0
3,188,216	+				-2.6
3,188,216	+				-1.1
3,188,216	+				+0.8
3,188,216	+				-0.8
3,188,216	+				+0.5
3,188,216	+				-0.8
3,188,216	+				-2.3
3,188,216	+				-1.1
3,188,217	-				-0.8
3,188,217	-				-1.1
3,188,217	-				-2.6
3,188,217	-				+0.9
3,188,217	-				-1.3
3,188,217	-				-1.5
3,188,217	-				+1.1
3,188,217	-				-2.8
3,188,217	-				-1.1
3,188,217	-				-1.8
3,188,217	-				-2.3
3,188,217	-				-1.5
3,188,217	-				-0.5
3,188,217	-				-1.1
3,188,217	-				-1.3
3,188,217	-				+0.0
3,188,217	-				-0.8
3,188,217	-				-0.5
3,188,377	+	yncE	OKGIIK_14610	0.22	-1.7
3,188,377	+	yncE	OKGIIK_14610	0.22	-2.3
3,188,513	+	yncE	OKGIIK_14610	0.35	-1.2
3,188,513	+	yncE	OKGIIK_14610	0.35	-0.8
3,188,514	-	yncE	OKGIIK_14610	0.35	-0.8
3,188,514	-	yncE	OKGIIK_14610	0.35	-1.5
3,188,514	-	yncE	OKGIIK_14610	0.35	-1.2
3,188,514	-	yncE	OKGIIK_14610	0.35	+0.2
3,188,514	-	yncE	OKGIIK_14610	0.35	-1.0
3,188,528	+	yncE	OKGIIK_14610	0.37	+0.5
3,188,528	+	yncE	OKGIIK_14610	0.37	-0.5
3,188,528	+	yncE	OKGIIK_14610	0.37	-0.8
3,188,528	+	yncE	OKGIIK_14610	0.37	-1.1
3,188,528	+	yncE	OKGIIK_14610	0.37	-0.7
3,188,528	+	yncE	OKGIIK_14610	0.37	+0.7
3,188,528	+	yncE	OKGIIK_14610	0.37	-1.0
3,188,529	-	yncE	OKGIIK_14610	0.37	-0.7
3,188,529	-	yncE	OKGIIK_14610	0.37	-1.9
3,188,529	-	yncE	OKGIIK_14610	0.37	-1.3
3,188,529	-	yncE	OKGIIK_14610	0.37	-1.5
3,188,529	-	yncE	OKGIIK_14610	0.37	-1.3
3,188,529	-	yncE	OKGIIK_14610	0.37	-0.5
3,188,529	-	yncE	OKGIIK_14610	0.37	-0.5
3,188,529	-	yncE	OKGIIK_14610	0.37	-0.3
3,188,529	-	yncE	OKGIIK_14610	0.37	-1.1
3,188,529	-	yncE	OKGIIK_14610	0.37	-0.8
3,188,529	-	yncE	OKGIIK_14610	0.37	+0.5
3,188,571	-	yncE	OKGIIK_14610	0.41	-1.8
3,188,594	+	yncE	OKGIIK_14610	0.43	-1.0
3,188,594	+	yncE	OKGIIK_14610	0.43	-1.1
3,188,594	+	yncE	OKGIIK_14610	0.43	-1.5
3,188,594	+	yncE	OKGIIK_14610	0.43	+1.2
3,188,594	+	yncE	OKGIIK_14610	0.43	-0.8
3,188,594	+	yncE	OKGIIK_14610	0.43	-0.8
3,188,594	+	yncE	OKGIIK_14610	0.43	-0.3
3,188,594	+	yncE	OKGIIK_14610	0.43	-3.1
3,188,595	-	yncE	OKGIIK_14610	0.43	-1.2
3,188,595	-	yncE	OKGIIK_14610	0.43	-1.1
3,188,595	-	yncE	OKGIIK_14610	0.43	-0.7
3,188,595	-	yncE	OKGIIK_14610	0.43	+1.1
3,188,595	-	yncE	OKGIIK_14610	0.43	+0.2
3,188,595	-	yncE	OKGIIK_14610	0.43	-1.8
3,188,595	-	yncE	OKGIIK_14610	0.43	-0.5
3,188,595	-	yncE	OKGIIK_14610	0.43	-1.3
3,188,595	-	yncE	OKGIIK_14610	0.43	+0.8
3,188,628	+	yncE	OKGIIK_14610	0.47	-0.9
3,188,628	+	yncE	OKGIIK_14610	0.47	-2.1
3,188,628	+	yncE	OKGIIK_14610	0.47	-1.2
3,188,628	+	yncE	OKGIIK_14610	0.47	+0.8
3,188,629	-	yncE	OKGIIK_14610	0.47	-1.7
3,188,629	-	yncE	OKGIIK_14610	0.47	-0.5
3,188,629	-	yncE	OKGIIK_14610	0.47	-0.7
3,188,629	-	yncE	OKGIIK_14610	0.47	-1.1
3,188,669	+	yncE	OKGIIK_14610	0.51	-0.7
3,188,669	+	yncE	OKGIIK_14610	0.51	-0.5
3,188,669	+	yncE	OKGIIK_14610	0.51	-1.1
3,188,670	-	yncE	OKGIIK_14610	0.51	-0.6
3,188,817	-	yncE	OKGIIK_14610	0.65	+0.1
3,188,817	-	yncE	OKGIIK_14610	0.65	-0.5
3,188,828	+	yncE	OKGIIK_14610	0.66	-1.1
3,188,828	+	yncE	OKGIIK_14610	0.66	-1.3
3,188,828	+	yncE	OKGIIK_14610	0.66	-2.0
3,188,828	+	yncE	OKGIIK_14610	0.66	-2.3
3,188,829	-	yncE	OKGIIK_14610	0.66	-1.5
3,188,829	-	yncE	OKGIIK_14610	0.66	-1.3
3,188,829	-	yncE	OKGIIK_14610	0.66	-2.3
3,188,829	-	yncE	OKGIIK_14610	0.66	-0.2
3,188,962	+	yncE	OKGIIK_14610	0.79	-1.1
3,188,963	-	yncE	OKGIIK_14610	0.80	-1.5
3,188,963	-	yncE	OKGIIK_14610	0.80	-2.7
3,188,963	-	yncE	OKGIIK_14610	0.80	-1.3
3,188,966	+	yncE	OKGIIK_14610	0.80	-0.8
3,188,966	+	yncE	OKGIIK_14610	0.80	-1.0
3,188,966	+	yncE	OKGIIK_14610	0.80	+0.3
3,188,966	+	yncE	OKGIIK_14610	0.80	-1.1
3,188,966	+	yncE	OKGIIK_14610	0.80	-1.1
3,188,966	+	yncE	OKGIIK_14610	0.80	-2.0
3,188,966	+	yncE	OKGIIK_14610	0.80	+0.1
3,188,966	+	yncE	OKGIIK_14610	0.80	-0.5
3,188,966	+	yncE	OKGIIK_14610	0.80	-1.3
3,188,966	+	yncE	OKGIIK_14610	0.80	-0.8
3,188,967	-	yncE	OKGIIK_14610	0.80	-0.1
3,188,967	-	yncE	OKGIIK_14610	0.80	+0.8
3,188,967	-	yncE	OKGIIK_14610	0.80	-1.7
3,188,967	-	yncE	OKGIIK_14610	0.80	-1.5
3,188,967	-	yncE	OKGIIK_14610	0.80	-0.7
3,188,967	-	yncE	OKGIIK_14610	0.80	-1.3
3,188,967	-	yncE	OKGIIK_14610	0.80	-0.8
3,188,967	-	yncE	OKGIIK_14610	0.80	-1.1
3,188,967	-	yncE	OKGIIK_14610	0.80	+1.1
3,188,967	-	yncE	OKGIIK_14610	0.80	-2.7
3,188,967	-	yncE	OKGIIK_14610	0.80	-1.2
3,188,967	-	yncE	OKGIIK_14610	0.80	-1.1
3,188,967	-	yncE	OKGIIK_14610	0.80	-0.8
3,188,967	-	yncE	OKGIIK_14610	0.80	-2.5
3,188,967	-	yncE	OKGIIK_14610	0.80	-1.3
3,188,967	-	yncE	OKGIIK_14610	0.80	-0.4
3,189,080	-				-0.5
3,189,080	-				-0.5
3,189,178	-				-2.3
3,189,241	+		OKGIIK_14615	0.18	-1.2
3,189,242	-		OKGIIK_14615	0.18	-1.1
3,189,360	+		OKGIIK_14615	0.49	-2.9
3,189,360	+		OKGIIK_14615	0.49	-3.0
3,189,361	-		OKGIIK_14615	0.49	-0.5
3,189,361	-		OKGIIK_14615	0.49	-0.5
3,189,402	+		OKGIIK_14615	0.60	-0.5
3,189,402	+		OKGIIK_14615	0.60	-0.8
3,189,402	+		OKGIIK_14615	0.60	-1.3
3,189,402	+		OKGIIK_14615	0.60	-1.3
3,189,402	+		OKGIIK_14615	0.60	-0.5
3,189,402	+		OKGIIK_14615	0.60	+0.5
3,189,402	+		OKGIIK_14615	0.60	+0.3
3,189,403	-		OKGIIK_14615	0.60	-0.8
3,189,403	-		OKGIIK_14615	0.60	-0.3
3,189,403	-		OKGIIK_14615	0.60	-0.9
3,189,403	-		OKGIIK_14615	0.60	-1.3
3,189,674	+				-2.6
3,189,674	+				+1.2
3,189,674	+				-0.4
3,189,674	+				-1.1
3,189,675	-				-1.3
3,189,675	-				-0.3
3,189,861	+		OKGIIK_14620	0.11	+0.5
3,189,907	+		OKGIIK_14620	0.16	+0.5
3,189,907	+		OKGIIK_14620	0.16	-0.1
3,189,907	+		OKGIIK_14620	0.16	-0.5
3,189,907	+		OKGIIK_14620	0.16	+0.2
3,189,907	+		OKGIIK_14620	0.16	-0.9
3,189,907	+		OKGIIK_14620	0.16	-1.3
3,189,908	-		OKGIIK_14620	0.16	-0.5
3,189,908	-		OKGIIK_14620	0.16	-1.5
3,189,908	-		OKGIIK_14620	0.16	-1.2
3,189,908	-		OKGIIK_14620	0.16	-1.1
3,189,908	-		OKGIIK_14620	0.16	-1.5
3,189,908	-		OKGIIK_14620	0.16	-0.7
3,189,908	-		OKGIIK_14620	0.16	+1.2
3,189,908	-		OKGIIK_14620	0.16	+1.1
3,189,908	-		OKGIIK_14620	0.16	-1.5
3,189,908	-		OKGIIK_14620	0.16	-0.3
3,189,908	-		OKGIIK_14620	0.16	-0.5
3,189,908	-		OKGIIK_14620	0.16	-0.7
3,189,908	-		OKGIIK_14620	0.16	-1.8
3,189,908	-		OKGIIK_14620	0.16	+0.1
3,189,908	-		OKGIIK_14620	0.16	-2.7
3,189,908	-		OKGIIK_14620	0.16	-1.8
3,189,908	-		OKGIIK_14620	0.16	-0.5
3,189,919	+		OKGIIK_14620	0.18	-1.0
3,189,919	+		OKGIIK_14620	0.18	-1.8
3,189,919	+		OKGIIK_14620	0.18	-0.7
3,189,920	-		OKGIIK_14620	0.18	-2.0
3,189,920	-		OKGIIK_14620	0.18	-0.1
3,189,988	+		OKGIIK_14620	0.25	-1.5
3,189,988	+		OKGIIK_14620	0.25	-0.5
3,189,988	+		OKGIIK_14620	0.25	-1.9
3,189,988	+		OKGIIK_14620	0.25	-1.6
3,189,988	+		OKGIIK_14620	0.25	-1.1
3,189,988	+		OKGIIK_14620	0.25	-0.5
3,189,989	-		OKGIIK_14620	0.25	-1.8
3,189,989	-		OKGIIK_14620	0.25	-1.1
3,189,989	-		OKGIIK_14620	0.25	-1.0
3,189,989	-		OKGIIK_14620	0.25	-0.8
3,190,033	+		OKGIIK_14620	0.30	-2.8
3,190,033	+		OKGIIK_14620	0.30	-0.4
3,190,033	+		OKGIIK_14620	0.30	+0.2
3,190,033	+		OKGIIK_14620	0.30	+2.0
3,190,033	+		OKGIIK_14620	0.30	-0.5
3,190,033	+		OKGIIK_14620	0.30	-1.1
3,190,033	+		OKGIIK_14620	0.30	-2.1
3,190,033	+		OKGIIK_14620	0.30	-1.1
3,190,033	+		OKGIIK_14620	0.30	+0.8
3,190,034	-		OKGIIK_14620	0.30	-1.3
3,190,034	-		OKGIIK_14620	0.30	-0.6
3,190,034	-		OKGIIK_14620	0.30	-0.8
3,190,034	-		OKGIIK_14620	0.30	-1.0
3,190,034	-		OKGIIK_14620	0.30	-1.3
3,190,034	-		OKGIIK_14620	0.30	-1.7
3,190,034	-		OKGIIK_14620	0.30	-0.1
3,190,074	+		OKGIIK_14620	0.34	-1.5
3,190,074	+		OKGIIK_14620	0.34	-1.1
3,190,075	-		OKGIIK_14620	0.34	-1.2
3,190,083	+		OKGIIK_14620	0.35	-2.3
3,190,084	-		OKGIIK_14620	0.35	-1.7
3,190,123	+		OKGIIK_14620	0.40	-2.0
3,190,123	+		OKGIIK_14620	0.40	-1.1
3,190,124	-		OKGIIK_14620	0.40	-0.8
3,190,124	-		OKGIIK_14620	0.40	-0.5
3,190,209	+		OKGIIK_14620	0.49	-0.5
3,190,209	+		OKGIIK_14620	0.49	+0.2
3,190,209	+		OKGIIK_14620	0.49	+0.2
3,190,209	+		OKGIIK_14620	0.49	-2.5
3,190,209	+		OKGIIK_14620	0.49	-1.1
3,190,209	+		OKGIIK_14620	0.49	-1.3
3,190,210	-		OKGIIK_14620	0.49	-0.4
3,190,210	-		OKGIIK_14620	0.49	-0.7
3,190,210	-		OKGIIK_14620	0.49	-0.5
3,190,210	-		OKGIIK_14620	0.49	-2.0
3,190,210	-		OKGIIK_14620	0.49	+0.2
3,190,210	-		OKGIIK_14620	0.49	-1.1
3,190,210	-		OKGIIK_14620	0.49	-1.4
3,190,211	-		OKGIIK_14620	0.49	-0.2
3,190,294	+		OKGIIK_14620	0.58	-1.9
3,190,294	+		OKGIIK_14620	0.58	-0.1
3,190,294	+		OKGIIK_14620	0.58	-0.8
3,190,294	+		OKGIIK_14620	0.58	-1.9
3,190,294	+		OKGIIK_14620	0.58	-0.5
3,190,294	+		OKGIIK_14620	0.58	-0.8
3,190,295	-		OKGIIK_14620	0.58	-1.1
3,190,295	-		OKGIIK_14620	0.58	-1.2
3,190,333	+		OKGIIK_14620	0.62	+0.7
3,190,333	+		OKGIIK_14620	0.62	+0.5
3,190,333	+		OKGIIK_14620	0.62	-2.5
3,190,333	+		OKGIIK_14620	0.62	-2.9
3,190,333	+		OKGIIK_14620	0.62	-0.5
3,190,333	+		OKGIIK_14620	0.62	-0.5
3,190,333	+		OKGIIK_14620	0.62	-1.5
3,190,333	+		OKGIIK_14620	0.62	+0.2
3,190,334	-		OKGIIK_14620	0.62	+0.5
3,190,334	-		OKGIIK_14620	0.62	+0.8
3,190,334	-		OKGIIK_14620	0.62	-1.5
3,190,334	-		OKGIIK_14620	0.62	-0.5
3,190,342	-		OKGIIK_14620	0.63	-1.3
3,190,348	-		OKGIIK_14620	0.64	-1.8
3,190,361	-		OKGIIK_14620	0.65	-1.7
3,190,402	+		OKGIIK_14620	0.70	-0.7
3,190,450	+		OKGIIK_14620	0.75	-1.3
3,190,451	-		OKGIIK_14620	0.75	-2.1