Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14500

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,169,657	+		OKGIIK_14490	0.82	+0.2
3,169,657	+		OKGIIK_14490	0.82	-1.3
3,169,657	+		OKGIIK_14490	0.82	-0.9
3,169,657	+		OKGIIK_14490	0.82	-1.1
3,169,657	+		OKGIIK_14490	0.82	+0.4
3,169,658	-		OKGIIK_14490	0.82	+1.0
3,169,658	-		OKGIIK_14490	0.82	-1.4
3,169,658	-		OKGIIK_14490	0.82	-1.5
3,169,687	-		OKGIIK_14490	0.85	-0.8
3,169,687	-		OKGIIK_14490	0.85	-0.3
3,169,720	+		OKGIIK_14490	0.88	-0.9
3,169,721	-		OKGIIK_14490	0.88	-0.9
3,169,746	+				+0.9
3,169,767	+				+0.7
3,169,767	+				+0.9
3,169,767	+				+0.8
3,169,767	+				+0.4
3,169,767	+				-1.1
3,169,767	+				-0.8
3,169,767	+				-1.1
3,169,768	-				+1.5
3,169,768	-				+1.1
3,169,768	-				-0.9
3,169,768	-				+0.2
3,169,768	-				-0.6
3,169,768	-				+1.6
3,169,778	+				-1.8
3,169,826	+				+0.2
3,169,826	+				-2.3
3,169,827	-				+0.4
3,169,832	-				-0.5
3,169,960	+		OKGIIK_14495	0.16	+0.2
3,170,069	+		OKGIIK_14495	0.32	-4.1
3,170,069	+		OKGIIK_14495	0.32	+0.2
3,170,070	-		OKGIIK_14495	0.32	+1.2
3,170,119	+		OKGIIK_14495	0.39	+2.0
3,170,179	+		OKGIIK_14495	0.48	-0.9
3,170,242	+		OKGIIK_14495	0.57	-1.5
3,170,242	+		OKGIIK_14495	0.57	+0.2
3,170,243	-		OKGIIK_14495	0.57	-0.5
3,170,271	+		OKGIIK_14495	0.61	-1.9
3,170,272	-		OKGIIK_14495	0.61	+1.8
3,170,272	-		OKGIIK_14495	0.61	-0.8
3,170,273	+		OKGIIK_14495	0.61	+0.9
3,170,273	+		OKGIIK_14495	0.61	+0.8
3,170,273	+		OKGIIK_14495	0.61	+1.0
3,170,273	+		OKGIIK_14495	0.61	-1.2
3,170,273	+		OKGIIK_14495	0.61	-0.7
3,170,274	-		OKGIIK_14495	0.61	-0.6
3,170,274	-		OKGIIK_14495	0.61	+0.5
3,170,274	-		OKGIIK_14495	0.61	+0.4
3,170,274	-		OKGIIK_14495	0.61	-0.3
3,170,274	-		OKGIIK_14495	0.61	+0.3
3,170,274	-		OKGIIK_14495	0.61	-0.6
3,170,274	-		OKGIIK_14495	0.61	-0.7
3,170,274	-		OKGIIK_14495	0.61	-1.4
3,170,274	-		OKGIIK_14495	0.61	-0.6
3,170,378	+		OKGIIK_14495	0.76	+0.6
3,170,637	+		OKGIIK_14500	0.14	-1.5
3,170,638	+		OKGIIK_14500	0.14	+0.1
3,170,639	-		OKGIIK_14500	0.14	+1.8
3,170,639	-		OKGIIK_14500	0.14	+0.9
3,170,639	-		OKGIIK_14500	0.14	+0.7
3,170,709	+		OKGIIK_14500	0.24	+1.8
3,170,710	-		OKGIIK_14500	0.24	-0.2
3,170,731	+		OKGIIK_14500	0.27	+2.0
3,170,732	-		OKGIIK_14500	0.27	+0.5
3,170,784	+		OKGIIK_14500	0.34	+1.2
3,170,785	-		OKGIIK_14500	0.34	+0.2
3,170,785	-		OKGIIK_14500	0.34	-0.2
3,170,785	-		OKGIIK_14500	0.34	+2.5
3,170,853	+		OKGIIK_14500	0.44	-0.3
3,170,853	+		OKGIIK_14500	0.44	+0.4
3,170,854	-		OKGIIK_14500	0.44	-0.8
3,170,943	+		OKGIIK_14500	0.56	+0.1
3,170,944	-		OKGIIK_14500	0.57	+0.8
3,170,944	-		OKGIIK_14500	0.57	-0.1
3,170,944	-		OKGIIK_14500	0.57	+0.2
3,170,944	-		OKGIIK_14500	0.57	+0.7
3,170,986	-		OKGIIK_14500	0.62	+0.5
3,170,992	+		OKGIIK_14500	0.63	-0.0
3,170,992	+		OKGIIK_14500	0.63	+0.2
3,171,067	-		OKGIIK_14500	0.74	-0.9
3,171,356	+				-0.9
3,171,476	+	ubiE	OKGIIK_14505	0.20	-0.5
3,171,477	-	ubiE	OKGIIK_14505	0.20	-1.0
3,171,494	+	ubiE	OKGIIK_14505	0.22	-1.3
3,171,494	+	ubiE	OKGIIK_14505	0.22	+0.1
3,171,495	-	ubiE	OKGIIK_14505	0.22	-0.1
3,171,495	-	ubiE	OKGIIK_14505	0.22	-0.1
3,171,671	+	ubiE	OKGIIK_14505	0.39	-1.0
3,171,671	+	ubiE	OKGIIK_14505	0.39	-0.1
3,171,671	+	ubiE	OKGIIK_14505	0.39	+0.1
3,171,672	-	ubiE	OKGIIK_14505	0.39	-0.5
3,171,672	-	ubiE	OKGIIK_14505	0.39	-0.0
3,171,672	-	ubiE	OKGIIK_14505	0.39	-0.9
3,171,672	-	ubiE	OKGIIK_14505	0.39	+1.9
3,171,747	-	ubiE	OKGIIK_14505	0.46	+1.2
3,171,747	-	ubiE	OKGIIK_14505	0.46	-1.9
3,171,761	+	ubiE	OKGIIK_14505	0.47	-2.4
3,171,761	+	ubiE	OKGIIK_14505	0.47	-0.6
3,171,761	+	ubiE	OKGIIK_14505	0.47	-0.3
3,171,761	+	ubiE	OKGIIK_14505	0.47	-0.7
3,171,761	+	ubiE	OKGIIK_14505	0.47	+0.9
3,171,762	-	ubiE	OKGIIK_14505	0.47	-0.8
3,171,762	-	ubiE	OKGIIK_14505	0.47	+0.7
3,171,762	-	ubiE	OKGIIK_14505	0.47	+0.5
3,171,762	-	ubiE	OKGIIK_14505	0.47	-1.7
3,171,762	-	ubiE	OKGIIK_14505	0.47	-0.3
3,171,762	-	ubiE	OKGIIK_14505	0.47	+0.2
3,171,762	-	ubiE	OKGIIK_14505	0.47	+1.7
3,171,847	+	ubiE	OKGIIK_14505	0.55	+0.1
3,171,847	+	ubiE	OKGIIK_14505	0.55	-1.3
3,171,848	-	ubiE	OKGIIK_14505	0.55	+0.5
3,172,049	+	ubiE	OKGIIK_14505	0.74	+0.2
3,172,049	+	ubiE	OKGIIK_14505	0.74	-1.8
3,172,049	+	ubiE	OKGIIK_14505	0.74	+0.7
3,172,049	+	ubiE	OKGIIK_14505	0.74	-0.9
3,172,049	+	ubiE	OKGIIK_14505	0.74	-1.3
3,172,050	-	ubiE	OKGIIK_14505	0.74	-0.4
3,172,050	-	ubiE	OKGIIK_14505	0.74	+1.1
3,172,130	+	ubiE	OKGIIK_14505	0.82	-2.6
3,172,130	+	ubiE	OKGIIK_14505	0.82	-0.3
3,172,131	-	ubiE	OKGIIK_14505	0.82	+0.9
3,172,144	+	ubiE	OKGIIK_14505	0.83	+0.2
3,172,144	+	ubiE	OKGIIK_14505	0.83	-0.1
3,172,145	-	ubiE	OKGIIK_14505	0.83	-0.6
3,172,145	-	ubiE	OKGIIK_14505	0.83	-1.0
3,172,183	+	ubiE	OKGIIK_14505	0.87	-1.6
3,172,183	+	ubiE	OKGIIK_14505	0.87	+0.2
3,172,184	-	ubiE	OKGIIK_14505	0.87	-1.8
3,172,184	-	ubiE	OKGIIK_14505	0.87	+0.1
3,172,254	-				-0.6