Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14385

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,142,043	+				-1.7
3,142,181	+		OKGIIK_14380	0.20	-1.9
3,142,181	+		OKGIIK_14380	0.20	-0.3
3,142,182	-		OKGIIK_14380	0.20	-0.5
3,142,182	-		OKGIIK_14380	0.20	-1.0
3,142,268	+		OKGIIK_14380	0.32	-2.0
3,142,268	+		OKGIIK_14380	0.32	-1.1
3,142,268	+		OKGIIK_14380	0.32	+0.3
3,142,268	+		OKGIIK_14380	0.32	+0.1
3,142,268	+		OKGIIK_14380	0.32	-1.3
3,142,268	+		OKGIIK_14380	0.32	-0.4
3,142,268	+		OKGIIK_14380	0.32	-0.5
3,142,268	+		OKGIIK_14380	0.32	-0.1
3,142,268	+		OKGIIK_14380	0.32	-1.8
3,142,268	+		OKGIIK_14380	0.32	-1.5
3,142,268	+		OKGIIK_14380	0.32	-2.3
3,142,268	+		OKGIIK_14380	0.32	-1.2
3,142,268	+		OKGIIK_14380	0.32	-1.8
3,142,268	+		OKGIIK_14380	0.32	-0.6
3,142,268	+		OKGIIK_14380	0.32	-0.1
3,142,269	-		OKGIIK_14380	0.32	-1.3
3,142,269	-		OKGIIK_14380	0.32	-1.5
3,142,269	-		OKGIIK_14380	0.32	+0.8
3,142,269	-		OKGIIK_14380	0.32	-0.5
3,142,269	-		OKGIIK_14380	0.32	-1.1
3,142,269	-		OKGIIK_14380	0.32	+0.2
3,142,269	-		OKGIIK_14380	0.32	-0.5
3,142,269	-		OKGIIK_14380	0.32	-2.2
3,142,538	+		OKGIIK_14380	0.71	-0.5
3,142,538	+		OKGIIK_14380	0.71	-0.8
3,142,539	-		OKGIIK_14380	0.71	-2.5
3,142,539	-		OKGIIK_14380	0.71	-0.9
3,142,548	+		OKGIIK_14380	0.72	-0.5
3,142,548	+		OKGIIK_14380	0.72	-1.5
3,142,548	+		OKGIIK_14380	0.72	-2.4
3,142,548	+		OKGIIK_14380	0.72	-0.5
3,142,548	+		OKGIIK_14380	0.72	-0.1
3,142,548	+		OKGIIK_14380	0.72	-1.1
3,142,548	+		OKGIIK_14380	0.72	-0.8
3,142,548	+		OKGIIK_14380	0.72	+0.5
3,142,548	+		OKGIIK_14380	0.72	-2.1
3,142,548	+		OKGIIK_14380	0.72	-1.2
3,142,548	+		OKGIIK_14380	0.72	-0.1
3,142,548	+		OKGIIK_14380	0.72	-0.5
3,142,548	+		OKGIIK_14380	0.72	-0.6
3,142,548	+		OKGIIK_14380	0.72	-0.8
3,142,548	+		OKGIIK_14380	0.72	-1.7
3,142,548	+		OKGIIK_14380	0.72	-2.3
3,142,548	+		OKGIIK_14380	0.72	-1.2
3,142,548	+		OKGIIK_14380	0.72	-0.1
3,142,549	-		OKGIIK_14380	0.72	-0.5
3,142,549	-		OKGIIK_14380	0.72	-1.3
3,142,549	-		OKGIIK_14380	0.72	-0.8
3,142,549	-		OKGIIK_14380	0.72	-0.1
3,142,549	-		OKGIIK_14380	0.72	-1.8
3,142,549	-		OKGIIK_14380	0.72	+0.3
3,142,549	-		OKGIIK_14380	0.72	-1.1
3,142,549	-		OKGIIK_14380	0.72	+0.5
3,142,549	-		OKGIIK_14380	0.72	-2.3
3,142,549	-		OKGIIK_14380	0.72	-0.5
3,142,549	-		OKGIIK_14380	0.72	-0.1
3,142,549	-		OKGIIK_14380	0.72	-0.8
3,142,549	-		OKGIIK_14380	0.72	+1.1
3,142,549	-		OKGIIK_14380	0.72	-0.9
3,142,549	-		OKGIIK_14380	0.72	-1.3
3,142,549	-		OKGIIK_14380	0.72	-1.5
3,142,549	-		OKGIIK_14380	0.72	-1.5
3,142,549	-		OKGIIK_14380	0.72	-0.4
3,142,549	-		OKGIIK_14380	0.72	-0.3
3,142,549	-		OKGIIK_14380	0.72	-1.4
3,142,549	-		OKGIIK_14380	0.72	+0.7
3,142,549	-		OKGIIK_14380	0.72	-1.3
3,142,549	-		OKGIIK_14380	0.72	-0.7
3,142,550	+		OKGIIK_14380	0.72	-0.8
3,142,550	+		OKGIIK_14380	0.72	-0.8
3,142,550	+		OKGIIK_14380	0.72	-1.3
3,142,550	+		OKGIIK_14380	0.72	-0.5
3,142,550	+		OKGIIK_14380	0.72	-2.0
3,142,550	+		OKGIIK_14380	0.72	-0.8
3,142,550	+		OKGIIK_14380	0.72	-1.3
3,142,550	+		OKGIIK_14380	0.72	-0.5
3,142,550	+		OKGIIK_14380	0.72	+0.4
3,142,550	+		OKGIIK_14380	0.72	-1.9
3,142,550	+		OKGIIK_14380	0.72	+0.4
3,142,550	+		OKGIIK_14380	0.72	-1.8
3,142,550	+		OKGIIK_14380	0.72	-0.5
3,142,550	+		OKGIIK_14380	0.72	-2.4
3,142,550	+		OKGIIK_14380	0.72	-1.1
3,142,550	+		OKGIIK_14380	0.72	-1.3
3,142,550	+		OKGIIK_14380	0.72	+0.1
3,142,550	+		OKGIIK_14380	0.72	-2.0
3,142,550	+		OKGIIK_14380	0.72	-2.0
3,142,550	+		OKGIIK_14380	0.72	+0.2
3,142,550	+		OKGIIK_14380	0.72	-0.8
3,142,550	+		OKGIIK_14380	0.72	-0.7
3,142,550	+		OKGIIK_14380	0.72	-1.8
3,142,550	+		OKGIIK_14380	0.72	+0.3
3,142,550	+		OKGIIK_14380	0.72	-0.4
3,142,550	+		OKGIIK_14380	0.72	+0.8
3,142,550	+		OKGIIK_14380	0.72	-2.0
3,142,550	+		OKGIIK_14380	0.72	-0.5
3,142,550	+		OKGIIK_14380	0.72	-2.6
3,142,550	+		OKGIIK_14380	0.72	-0.5
3,142,550	+		OKGIIK_14380	0.72	-0.7
3,142,550	+		OKGIIK_14380	0.72	-0.4
3,142,550	+		OKGIIK_14380	0.72	-2.6
3,142,550	+		OKGIIK_14380	0.72	-0.8
3,142,550	+		OKGIIK_14380	0.72	-1.7
3,142,551	-		OKGIIK_14380	0.73	-0.5
3,142,551	-		OKGIIK_14380	0.73	-2.1
3,142,551	-		OKGIIK_14380	0.73	-0.8
3,142,551	-		OKGIIK_14380	0.73	+0.2
3,142,551	-		OKGIIK_14380	0.73	-1.7
3,142,551	-		OKGIIK_14380	0.73	-2.1
3,142,551	-		OKGIIK_14380	0.73	-1.5
3,142,551	-		OKGIIK_14380	0.73	-0.1
3,142,551	-		OKGIIK_14380	0.73	-1.3
3,142,551	-		OKGIIK_14380	0.73	-0.5
3,142,551	-		OKGIIK_14380	0.73	+0.5
3,142,551	-		OKGIIK_14380	0.73	-2.0
3,142,551	-		OKGIIK_14380	0.73	-0.6
3,142,551	-		OKGIIK_14380	0.73	-0.6
3,142,551	-		OKGIIK_14380	0.73	+0.9
3,142,551	-		OKGIIK_14380	0.73	-0.5
3,142,551	-		OKGIIK_14380	0.73	-0.6
3,142,551	-		OKGIIK_14380	0.73	+0.1
3,142,551	-		OKGIIK_14380	0.73	-1.1
3,142,551	-		OKGIIK_14380	0.73	-0.5
3,142,551	-		OKGIIK_14380	0.73	-0.5
3,142,551	-		OKGIIK_14380	0.73	-2.4
3,142,551	-		OKGIIK_14380	0.73	+0.5
3,142,551	-		OKGIIK_14380	0.73	-2.7
3,142,551	-		OKGIIK_14380	0.73	-2.4
3,142,551	-		OKGIIK_14380	0.73	-1.1
3,142,551	-		OKGIIK_14380	0.73	-2.5
3,142,552	-		OKGIIK_14380	0.73	+1.5
3,142,552	-		OKGIIK_14380	0.73	-2.2
3,142,709	+				-0.8
3,142,709	+				-0.5
3,142,710	-				-0.7
3,142,710	-				+0.8
3,142,757	+				-1.5
3,142,757	+				-0.8
3,142,757	+				-2.0
3,142,757	+				-1.1
3,142,757	+				-0.5
3,142,757	+				-1.3
3,142,757	+				-1.1
3,142,757	+				+0.2
3,142,757	+				-0.1
3,142,757	+				-0.5
3,142,757	+				-3.2
3,142,758	-				-0.1
3,142,758	-				-1.1
3,142,758	-				+1.1
3,142,758	-				+1.5
3,142,758	-				-0.3
3,142,758	-				-1.3
3,142,758	-				-2.6
3,142,758	-				-2.0
3,142,758	-				-0.3
3,142,758	-				-0.9
3,143,081	+		OKGIIK_14385	0.45	-0.5
3,143,082	-		OKGIIK_14385	0.46	-0.5
3,143,082	-		OKGIIK_14385	0.46	-1.8
3,143,082	-		OKGIIK_14385	0.46	-2.0
3,143,082	-		OKGIIK_14385	0.46	-2.0
3,143,172	-		OKGIIK_14385	0.60	-0.8
3,143,172	-		OKGIIK_14385	0.60	-0.5
3,143,247	-		OKGIIK_14385	0.72	-2.2
3,143,247	-		OKGIIK_14385	0.72	-2.4
3,143,247	-		OKGIIK_14385	0.72	-1.6
3,143,687	+		OKGIIK_14390	0.21	-0.8
3,143,687	+		OKGIIK_14390	0.21	-2.1
3,143,687	+		OKGIIK_14390	0.21	-0.9
3,143,687	+		OKGIIK_14390	0.21	-0.3
3,143,688	-		OKGIIK_14390	0.22	-0.5
3,143,688	-		OKGIIK_14390	0.22	-1.3
3,143,688	-		OKGIIK_14390	0.22	+0.5
3,143,688	-		OKGIIK_14390	0.22	-0.8
3,143,924	+		OKGIIK_14390	0.66	-1.1
3,143,924	+		OKGIIK_14390	0.66	-1.3
3,143,925	-		OKGIIK_14390	0.66	-0.3
3,143,936	+		OKGIIK_14390	0.68	+0.2
3,143,936	+		OKGIIK_14390	0.68	-0.5
3,143,937	-		OKGIIK_14390	0.69	+0.5
3,143,937	-		OKGIIK_14390	0.69	-1.7
3,143,937	-		OKGIIK_14390	0.69	-0.5
3,144,101	+				-0.5
3,144,101	+				-2.4
3,144,101	+				-1.1
3,144,101	+				-1.7
3,144,101	+				-0.1
3,144,101	+				-1.1
3,144,101	+				-0.5
3,144,101	+				-0.8
3,144,101	+				-1.2
3,144,101	+				-1.7
3,144,101	+				-1.4
3,144,101	+				-1.4
3,144,101	+				-0.7
3,144,101	+				-0.2
3,144,102	-				-0.5
3,144,102	-				-1.3
3,144,102	-				-2.0
3,144,102	-				-0.9
3,144,102	-				-0.2
3,144,102	-				-1.1
3,144,102	-				-2.0
3,144,102	-				-2.0
3,144,102	-				-0.3
3,144,102	-				+0.5
3,144,102	-				-0.7
3,144,102	-				-1.3
3,144,102	-				-1.0