Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14245

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,104,792	+	gluP	OKGIIK_14240	0.47	-0.7
3,104,792	+	gluP	OKGIIK_14240	0.47	-0.7
3,104,792	+	gluP	OKGIIK_14240	0.47	-0.3
3,104,792	+	gluP	OKGIIK_14240	0.47	-0.6
3,104,792	+	gluP	OKGIIK_14240	0.47	-1.1
3,104,792	+	gluP	OKGIIK_14240	0.47	+0.4
3,104,792	+	gluP	OKGIIK_14240	0.47	-0.1
3,104,792	+	gluP	OKGIIK_14240	0.47	-1.7
3,104,792	+	gluP	OKGIIK_14240	0.47	-1.7
3,104,793	-	gluP	OKGIIK_14240	0.47	+0.5
3,104,793	-	gluP	OKGIIK_14240	0.47	+0.3
3,104,793	-	gluP	OKGIIK_14240	0.47	-0.3
3,104,793	-	gluP	OKGIIK_14240	0.47	+0.3
3,104,793	-	gluP	OKGIIK_14240	0.47	-1.0
3,104,793	-	gluP	OKGIIK_14240	0.47	-0.9
3,104,960	+	gluP	OKGIIK_14240	0.60	-1.7
3,104,960	+	gluP	OKGIIK_14240	0.60	+0.3
3,104,961	-	gluP	OKGIIK_14240	0.60	-0.7
3,104,961	-	gluP	OKGIIK_14240	0.60	-0.4
3,105,002	+	gluP	OKGIIK_14240	0.63	-1.7
3,105,002	+	gluP	OKGIIK_14240	0.63	+1.3
3,105,002	+	gluP	OKGIIK_14240	0.63	+0.5
3,105,003	-	gluP	OKGIIK_14240	0.63	-1.5
3,105,003	-	gluP	OKGIIK_14240	0.63	+1.3
3,105,003	-	gluP	OKGIIK_14240	0.63	+0.1
3,105,003	-	gluP	OKGIIK_14240	0.63	+3.3
3,105,003	-	gluP	OKGIIK_14240	0.63	+0.3
3,105,053	+	gluP	OKGIIK_14240	0.67	+0.3
3,105,053	+	gluP	OKGIIK_14240	0.67	+2.6
3,105,053	+	gluP	OKGIIK_14240	0.67	-1.7
3,105,054	-	gluP	OKGIIK_14240	0.67	+0.1
3,105,080	+	gluP	OKGIIK_14240	0.69	+0.3
3,105,081	-	gluP	OKGIIK_14240	0.69	-0.5
3,105,128	+	gluP	OKGIIK_14240	0.73	+0.9
3,105,128	+	gluP	OKGIIK_14240	0.73	+2.7
3,105,129	-	gluP	OKGIIK_14240	0.73	+0.1
3,105,192	-	gluP	OKGIIK_14240	0.78	+0.1
3,105,286	+	gluP	OKGIIK_14240	0.85	-2.1
3,105,413	+				+0.9
3,105,413	+				-0.6
3,105,413	+				-1.1
3,105,413	+				+0.4
3,105,413	+				+1.1
3,105,413	+				-0.6
3,105,413	+				-1.8
3,105,414	-				-0.6
3,105,414	-				+1.5
3,105,414	-				-0.1
3,105,419	+				+0.3
3,105,419	+				-0.3
3,105,419	+				-0.1
3,105,419	+				+0.2
3,105,419	+				+0.0
3,105,419	+				+0.3
3,105,419	+				-1.7
3,105,419	+				+0.3
3,105,419	+				+1.1
3,105,419	+				+1.3
3,105,419	+				-0.3
3,105,419	+				+0.1
3,105,419	+				-0.6
3,105,419	+				-1.3
3,105,419	+				+0.0
3,105,419	+				+0.7
3,105,419	+				+0.3
3,105,419	+				-0.1
3,105,419	+				-0.4
3,105,419	+				+0.3
3,105,419	+				+0.4
3,105,420	-				-0.3
3,105,420	-				-0.1
3,105,420	-				-1.3
3,105,420	-				-0.3
3,105,420	-				-0.3
3,105,420	-				+0.4
3,105,420	-				-0.6
3,105,420	-				+1.5
3,105,420	-				-1.4
3,105,420	-				+0.6
3,105,420	-				-1.2
3,105,420	-				-0.7
3,105,420	-				-0.1
3,105,420	-				-1.0
3,105,420	-				-0.2
3,105,420	-				-1.1
3,105,420	-				-1.1
3,105,428	+				-1.2
3,105,428	+				-1.3
3,105,429	-				-1.0
3,105,429	-				-0.8
3,105,429	-				-0.2
3,105,429	-				-1.3
3,105,429	-				+1.3
3,105,429	-				-0.1
3,105,429	-				-0.3
3,105,431	+				+0.5
3,105,431	+				+0.4
3,105,431	+				-2.6
3,105,432	-				+0.1
3,105,497	+				+0.3
3,105,497	+				-0.3
3,105,498	-				-0.9
3,105,539	+				+0.7
3,105,539	+				-1.4
3,105,540	-				+1.8
3,105,654	+				-0.4
3,105,654	+				-2.7
3,105,654	+				-0.7
3,105,655	-				-0.3
3,105,655	-				-2.3
3,105,655	-				+1.1
3,105,655	-				-1.2
3,105,655	-				+1.0
3,105,655	-				+0.3
3,105,655	-				-0.7
3,105,659	+				-1.2
3,105,659	+				-1.3
3,105,660	-				-0.7
3,105,719	+				-0.1
3,105,720	-				-0.9
3,105,720	-				-1.6
3,105,735	+				+1.3
3,105,735	+				-1.1
3,105,735	+				-2.1
3,105,736	-				+1.3
3,105,936	-	purR	OKGIIK_14245	0.17	-1.1
3,105,953	+	purR	OKGIIK_14245	0.19	-0.3
3,105,953	+	purR	OKGIIK_14245	0.19	-0.3
3,105,953	+	purR	OKGIIK_14245	0.19	+0.0
3,105,953	+	purR	OKGIIK_14245	0.19	-2.1
3,105,954	-	purR	OKGIIK_14245	0.19	+0.8
3,105,954	-	purR	OKGIIK_14245	0.19	+0.0
3,105,975	-	purR	OKGIIK_14245	0.21	+0.5
3,105,975	-	purR	OKGIIK_14245	0.21	+2.3
3,105,975	-	purR	OKGIIK_14245	0.21	+0.5
3,105,975	-	purR	OKGIIK_14245	0.21	-0.3
3,105,975	-	purR	OKGIIK_14245	0.21	+0.3
3,106,238	+	purR	OKGIIK_14245	0.45	-0.6
3,106,238	+	purR	OKGIIK_14245	0.45	-0.7
3,106,238	+	purR	OKGIIK_14245	0.45	-0.9
3,106,239	-	purR	OKGIIK_14245	0.45	+0.4
3,106,263	-	purR	OKGIIK_14245	0.47	+0.9
3,106,263	-	purR	OKGIIK_14245	0.47	+0.6
3,106,263	-	purR	OKGIIK_14245	0.47	+1.4
3,106,361	+	purR	OKGIIK_14245	0.57	-1.4
3,106,382	+	purR	OKGIIK_14245	0.58	+0.3
3,106,382	+	purR	OKGIIK_14245	0.58	+1.9
3,106,424	+	purR	OKGIIK_14245	0.62	+0.9
3,106,424	+	purR	OKGIIK_14245	0.62	+1.1
3,106,425	-	purR	OKGIIK_14245	0.62	+0.3
3,106,425	-	purR	OKGIIK_14245	0.62	+0.4
3,106,425	-	purR	OKGIIK_14245	0.62	-0.6
3,106,425	-	purR	OKGIIK_14245	0.62	-0.9
3,106,425	-	purR	OKGIIK_14245	0.62	+0.7
3,106,562	+	purR	OKGIIK_14245	0.75	+0.3
3,106,562	+	purR	OKGIIK_14245	0.75	-1.1
3,106,562	+	purR	OKGIIK_14245	0.75	+1.2
3,106,822	+				-0.3
3,106,822	+				-1.4
3,106,897	+				-1.6
3,106,897	+				-0.1
3,106,897	+				-0.6
3,106,897	+				+0.9
3,106,897	+				-0.1
3,106,898	-				+0.8
3,106,898	-				-1.0
3,106,898	-				-1.7
3,106,898	-				+0.7
3,106,919	-				-1.1
3,106,927	+				+0.4
3,106,927	+				-2.1
3,106,927	+				-0.6
3,106,927	+				-1.1
3,106,927	+				+0.3
3,106,927	+				-0.7
3,106,927	+				+1.3
3,106,927	+				-0.6
3,106,927	+				+0.3
3,106,927	+				-0.1
3,106,927	+				-0.6
3,106,928	-				+0.0
3,106,928	-				-0.4
3,106,928	-				-0.3
3,106,928	-				+0.2
3,106,928	-				+0.3
3,106,928	-				-0.4
3,106,928	-				-0.2
3,106,928	-				+0.5
3,106,928	-				-0.1
3,106,928	-				-0.6
3,106,928	-				-0.1
3,106,928	-				+1.8
3,106,928	-				+1.6
3,106,928	-				+0.1
3,106,978	+				-0.3
3,106,979	-				-0.1
3,106,993	+	kex1	OKGIIK_14250	0.11	+0.7
3,106,993	+	kex1	OKGIIK_14250	0.11	+0.5
3,106,994	-	kex1	OKGIIK_14250	0.11	-1.9
3,107,011	+	kex1	OKGIIK_14250	0.12	+1.0
3,107,011	+	kex1	OKGIIK_14250	0.12	+0.7
3,107,011	+	kex1	OKGIIK_14250	0.12	-1.7
3,107,011	+	kex1	OKGIIK_14250	0.12	+0.4
3,107,011	+	kex1	OKGIIK_14250	0.12	+0.7
3,107,011	+	kex1	OKGIIK_14250	0.12	+0.8
3,107,011	+	kex1	OKGIIK_14250	0.12	-1.1
3,107,012	-	kex1	OKGIIK_14250	0.12	+0.8
3,107,012	-	kex1	OKGIIK_14250	0.12	-1.5
3,107,012	-	kex1	OKGIIK_14250	0.12	+0.3
3,107,012	-	kex1	OKGIIK_14250	0.12	+0.4
3,107,012	-	kex1	OKGIIK_14250	0.12	-0.1
3,107,012	-	kex1	OKGIIK_14250	0.12	-1.4
3,107,014	+	kex1	OKGIIK_14250	0.12	+1.1
3,107,014	+	kex1	OKGIIK_14250	0.12	+0.3
3,107,014	+	kex1	OKGIIK_14250	0.12	-1.2
3,107,015	-	kex1	OKGIIK_14250	0.12	+0.2
3,107,015	-	kex1	OKGIIK_14250	0.12	-2.1
3,107,015	-	kex1	OKGIIK_14250	0.12	-1.8
3,107,029	+	kex1	OKGIIK_14250	0.13	-1.1
3,107,029	+	kex1	OKGIIK_14250	0.13	-1.4
3,107,029	+	kex1	OKGIIK_14250	0.13	+0.1
3,107,029	+	kex1	OKGIIK_14250	0.13	+0.3
3,107,029	+	kex1	OKGIIK_14250	0.13	-2.9
3,107,030	-	kex1	OKGIIK_14250	0.13	-0.6
3,107,030	-	kex1	OKGIIK_14250	0.13	-0.1
3,107,030	-	kex1	OKGIIK_14250	0.13	+0.3
3,107,030	-	kex1	OKGIIK_14250	0.13	-1.1
3,107,030	-	kex1	OKGIIK_14250	0.13	+0.1
3,107,030	-	kex1	OKGIIK_14250	0.13	+0.4
3,107,030	-	kex1	OKGIIK_14250	0.13	+0.1
3,107,030	-	kex1	OKGIIK_14250	0.13	+0.1
3,107,030	-	kex1	OKGIIK_14250	0.13	-1.3
3,107,030	-	kex1	OKGIIK_14250	0.13	-1.7
3,107,030	-	kex1	OKGIIK_14250	0.13	-0.7
3,107,030	-	kex1	OKGIIK_14250	0.13	+2.3
3,107,167	+	kex1	OKGIIK_14250	0.22	-0.3
3,107,206	+	kex1	OKGIIK_14250	0.24	+1.3
3,107,206	+	kex1	OKGIIK_14250	0.24	+0.3
3,107,206	+	kex1	OKGIIK_14250	0.24	+0.9
3,107,206	+	kex1	OKGIIK_14250	0.24	-1.4
3,107,206	+	kex1	OKGIIK_14250	0.24	-0.7
3,107,206	+	kex1	OKGIIK_14250	0.24	+1.7
3,107,206	+	kex1	OKGIIK_14250	0.24	-0.9
3,107,206	+	kex1	OKGIIK_14250	0.24	+0.1
3,107,206	+	kex1	OKGIIK_14250	0.24	-1.3
3,107,207	-	kex1	OKGIIK_14250	0.24	+0.3
3,107,207	-	kex1	OKGIIK_14250	0.24	-0.6
3,107,207	-	kex1	OKGIIK_14250	0.24	-0.7
3,107,227	+	kex1	OKGIIK_14250	0.25	+0.1
3,107,227	+	kex1	OKGIIK_14250	0.25	-0.6
3,107,260	+	kex1	OKGIIK_14250	0.27	+0.1
3,107,398	+	kex1	OKGIIK_14250	0.36	+0.3
3,107,398	+	kex1	OKGIIK_14250	0.36	-0.3
3,107,398	+	kex1	OKGIIK_14250	0.36	-1.2
3,107,398	+	kex1	OKGIIK_14250	0.36	-1.0
3,107,399	-	kex1	OKGIIK_14250	0.36	-1.0
3,107,399	-	kex1	OKGIIK_14250	0.36	+0.2
3,107,399	-	kex1	OKGIIK_14250	0.36	-0.1
3,107,399	-	kex1	OKGIIK_14250	0.36	-1.7
3,107,399	-	kex1	OKGIIK_14250	0.36	-0.4
3,107,419	+	kex1	OKGIIK_14250	0.37	-0.4
3,107,419	+	kex1	OKGIIK_14250	0.37	-0.1
3,107,419	+	kex1	OKGIIK_14250	0.37	-0.6
3,107,419	+	kex1	OKGIIK_14250	0.37	-0.7
3,107,420	-	kex1	OKGIIK_14250	0.37	+1.7
3,107,420	-	kex1	OKGIIK_14250	0.37	-0.6
3,107,420	-	kex1	OKGIIK_14250	0.37	-0.3
3,107,420	-	kex1	OKGIIK_14250	0.37	-0.9
3,107,420	-	kex1	OKGIIK_14250	0.37	-0.8
3,107,494	+	kex1	OKGIIK_14250	0.42	+0.8
3,107,494	+	kex1	OKGIIK_14250	0.42	-1.6
3,107,509	+	kex1	OKGIIK_14250	0.43	-1.0
3,107,509	+	kex1	OKGIIK_14250	0.43	-1.2
3,107,510	-	kex1	OKGIIK_14250	0.43	+0.3
3,107,510	-	kex1	OKGIIK_14250	0.43	-0.3
3,107,510	-	kex1	OKGIIK_14250	0.43	-1.2
3,107,572	+	kex1	OKGIIK_14250	0.47	-1.2
3,107,572	+	kex1	OKGIIK_14250	0.47	-0.3
3,107,572	+	kex1	OKGIIK_14250	0.47	+1.3
3,107,572	+	kex1	OKGIIK_14250	0.47	-0.7
3,107,572	+	kex1	OKGIIK_14250	0.47	+0.3
3,107,572	+	kex1	OKGIIK_14250	0.47	-0.7
3,107,572	+	kex1	OKGIIK_14250	0.47	-0.1
3,107,572	+	kex1	OKGIIK_14250	0.47	+1.3
3,107,572	+	kex1	OKGIIK_14250	0.47	-0.1
3,107,572	+	kex1	OKGIIK_14250	0.47	+0.4
3,107,572	+	kex1	OKGIIK_14250	0.47	-0.0
3,107,573	-	kex1	OKGIIK_14250	0.47	+0.9
3,107,573	-	kex1	OKGIIK_14250	0.47	-1.7
3,107,573	-	kex1	OKGIIK_14250	0.47	-0.6
3,107,573	-	kex1	OKGIIK_14250	0.47	+0.9
3,107,573	-	kex1	OKGIIK_14250	0.47	+0.6
3,107,573	-	kex1	OKGIIK_14250	0.47	+2.3
3,107,573	-	kex1	OKGIIK_14250	0.47	-1.1
3,107,758	+	kex1	OKGIIK_14250	0.58	-0.2
3,107,758	+	kex1	OKGIIK_14250	0.58	+2.0
3,107,759	-	kex1	OKGIIK_14250	0.59	-0.2
3,107,759	-	kex1	OKGIIK_14250	0.59	-1.7
3,107,759	-	kex1	OKGIIK_14250	0.59	-0.1
3,107,759	-	kex1	OKGIIK_14250	0.59	-0.9
3,107,759	-	kex1	OKGIIK_14250	0.59	+1.5
3,107,776	+	kex1	OKGIIK_14250	0.60	-0.3
3,107,776	+	kex1	OKGIIK_14250	0.60	-0.1
3,107,776	+	kex1	OKGIIK_14250	0.60	-0.2
3,107,776	+	kex1	OKGIIK_14250	0.60	-0.3
3,107,777	-	kex1	OKGIIK_14250	0.60	-0.6
3,107,777	-	kex1	OKGIIK_14250	0.60	-0.6
3,107,777	-	kex1	OKGIIK_14250	0.60	+0.1
3,107,777	-	kex1	OKGIIK_14250	0.60	-0.6
3,107,777	-	kex1	OKGIIK_14250	0.60	-0.6
3,107,777	-	kex1	OKGIIK_14250	0.60	+0.8
3,107,777	-	kex1	OKGIIK_14250	0.60	-0.8
3,107,800	+	kex1	OKGIIK_14250	0.61	+0.1
3,107,800	+	kex1	OKGIIK_14250	0.61	+0.7
3,107,800	+	kex1	OKGIIK_14250	0.61	-1.3
3,107,800	+	kex1	OKGIIK_14250	0.61	-1.1
3,107,801	-	kex1	OKGIIK_14250	0.61	+1.4
3,107,801	-	kex1	OKGIIK_14250	0.61	-0.8
3,107,801	-	kex1	OKGIIK_14250	0.61	-0.3
3,107,801	-	kex1	OKGIIK_14250	0.61	+0.7
3,107,801	-	kex1	OKGIIK_14250	0.61	-1.2