Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14220

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,095,735	+		OKGIIK_14210	0.90	+1.5
3,095,735	+		OKGIIK_14210	0.90	-0.7
3,095,735	+		OKGIIK_14210	0.90	-0.9
3,095,736	-		OKGIIK_14210	0.90	-0.1
3,095,821	+				-1.2
3,096,046	+				-0.2
3,096,046	+				-1.6
3,096,249	-		OKGIIK_14215	0.33	-0.1
3,096,353	+				-0.7
3,096,446	+				-0.1
3,096,446	+				+2.3
3,096,447	-				+0.7
3,096,447	-				-1.3
3,096,447	-				+1.4
3,096,447	-				+1.0
3,096,447	-				+0.1
3,096,447	-				-1.4
3,096,491	+		OKGIIK_14220	0.13	+0.8
3,096,492	-		OKGIIK_14220	0.13	-0.1
3,096,492	-		OKGIIK_14220	0.13	+2.3
3,096,492	-		OKGIIK_14220	0.13	+0.3
3,096,891	-		OKGIIK_14220	0.51	-0.1
3,096,891	-		OKGIIK_14220	0.51	+0.1
3,096,972	+		OKGIIK_14220	0.58	-0.1
3,096,972	+		OKGIIK_14220	0.58	-0.7
3,096,972	+		OKGIIK_14220	0.58	+0.8
3,096,972	+		OKGIIK_14220	0.58	+0.7
3,096,973	-		OKGIIK_14220	0.58	-0.1
3,096,973	-		OKGIIK_14220	0.58	+0.8
3,096,973	-		OKGIIK_14220	0.58	+0.0
3,096,973	-		OKGIIK_14220	0.58	+0.3
3,096,973	-		OKGIIK_14220	0.58	+1.2
3,096,974	+		OKGIIK_14220	0.58	+1.1
3,096,974	+		OKGIIK_14220	0.58	+2.3
3,096,974	+		OKGIIK_14220	0.58	-0.4
3,096,974	+		OKGIIK_14220	0.58	-1.3
3,096,975	-		OKGIIK_14220	0.58	+1.8
3,097,025	+		OKGIIK_14220	0.63	+0.5
3,097,025	+		OKGIIK_14220	0.63	+0.1
3,097,025	+		OKGIIK_14220	0.63	-0.2
3,097,026	-		OKGIIK_14220	0.63	-0.6
3,097,026	-		OKGIIK_14220	0.63	+0.4
3,097,026	-		OKGIIK_14220	0.63	-1.3
3,097,026	-		OKGIIK_14220	0.63	-1.1
3,097,026	-		OKGIIK_14220	0.63	-0.9
3,097,322	+				-1.2
3,097,323	-				+0.9
3,097,323	-				-0.6
3,097,323	-				-0.3
3,097,477	+				+0.4
3,097,478	-				+0.4
3,097,478	-				-0.6
3,097,777	+		OKGIIK_14225	0.16	-0.7
3,097,777	+		OKGIIK_14225	0.16	+1.3
3,097,778	-		OKGIIK_14225	0.16	+0.3
3,097,778	-		OKGIIK_14225	0.16	-1.0
3,097,988	-		OKGIIK_14225	0.25	-0.6
3,098,380	+		OKGIIK_14225	0.42	-0.7
3,098,380	+		OKGIIK_14225	0.42	-1.6
3,098,380	+		OKGIIK_14225	0.42	+0.3
3,098,380	+		OKGIIK_14225	0.42	+2.3
3,098,381	-		OKGIIK_14225	0.42	-0.3
3,098,381	-		OKGIIK_14225	0.42	-0.4
3,098,381	-		OKGIIK_14225	0.42	-0.1