Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14095

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,064,810	+	argD	OKGIIK_14090	0.49	-2.3
3,064,810	+	argD	OKGIIK_14090	0.49	+1.3
3,064,810	+	argD	OKGIIK_14090	0.49	-0.7
3,064,811	-	argD	OKGIIK_14090	0.50	-0.8
3,064,811	-	argD	OKGIIK_14090	0.50	-2.0
3,064,811	-	argD	OKGIIK_14090	0.50	+0.1
3,064,841	-	argD	OKGIIK_14090	0.52	+1.9
3,064,841	-	argD	OKGIIK_14090	0.52	-0.1
3,065,156	-	argD	OKGIIK_14090	0.74	-2.8
3,065,168	-	argD	OKGIIK_14090	0.75	+0.3
3,065,410	+				-0.8
3,065,410	+				+0.3
3,065,410	+				-2.2
3,065,411	-				-1.5
3,065,411	-				-0.9
3,065,411	-				-1.1
3,065,411	-				-0.1
3,065,531	-				+1.7
3,065,531	-				-0.5
3,065,744	+				-1.1
3,065,759	+				-0.3
3,065,759	+				+0.5
3,065,759	+				+0.9
3,065,764	+				-0.3
3,065,776	-				-1.1
3,065,776	-				-0.5
3,065,873	+		OKGIIK_14095	0.37	+0.3
3,065,873	+		OKGIIK_14095	0.37	-0.1
3,065,874	-		OKGIIK_14095	0.37	-1.5
3,065,874	-		OKGIIK_14095	0.37	-1.3
3,065,874	-		OKGIIK_14095	0.37	-0.3
3,065,874	-		OKGIIK_14095	0.37	+0.2
3,065,892	+		OKGIIK_14095	0.43	+0.6
3,066,041	+				+0.5
3,066,042	-				+0.5
3,066,042	-				-0.1
3,066,345	+				-0.1
3,066,345	+				-0.9
3,066,345	+				-1.1
3,066,392	+				+1.3
3,066,393	-				+1.1
3,066,393	-				-0.2
3,066,393	-				+0.8
3,066,393	-				+0.5
3,066,393	-				-0.5
3,066,419	+				+0.0
3,066,419	+				-0.4
3,066,419	+				-1.1
3,066,419	+				-2.1
3,066,420	-				-0.7
3,066,420	-				-0.1
3,066,420	-				+1.3
3,066,420	-				+0.9
3,066,420	-				-0.1
3,066,420	-				+0.8
3,066,420	-				+0.2
3,066,512	+				+0.3
3,066,512	+				-1.1
3,066,512	+				-2.3
3,066,512	+				+0.1
3,066,513	-				-1.9
3,066,513	-				+1.3
3,066,513	-				-0.5
3,066,513	-				+1.3
3,066,513	-				-0.9
3,066,513	-				+0.3
3,066,576	+				-3.1
3,066,576	+				-0.3
3,066,576	+				-1.5
3,066,576	+				-0.2
3,066,576	+				-0.1
3,066,576	+				+0.9
3,066,577	-				-2.8
3,066,577	-				-1.8
3,066,577	-				-1.2
3,066,577	-				-1.3
3,066,577	-				-1.2
3,066,577	-				-0.1
3,066,628	+				+0.8
3,066,628	+				-0.7
3,066,628	+				+1.5
3,066,628	+				+0.9
3,066,628	+				+1.6
3,066,628	+				-0.5
3,066,628	+				-0.7
3,066,628	+				-1.1
3,066,628	+				-0.8
3,066,628	+				-0.4
3,066,629	-				+0.2
3,066,629	-				+1.4
3,066,629	-				+0.4
3,066,629	-				-0.4
3,066,629	-				-0.3
3,066,629	-				-0.3
3,066,629	-				+0.5
3,066,629	-				-1.3
3,066,629	-				-0.3
3,066,629	-				-0.9
3,066,629	-				-0.6
3,066,629	-				+0.3
3,066,629	-				-1.6
3,066,629	-				+0.3
3,066,632	+				-1.2
3,066,632	+				+1.5
3,066,632	+				-2.2
3,066,632	+				-0.9
3,066,632	+				-0.1
3,066,632	+				-0.1
3,066,632	+				+0.4
3,066,632	+				-0.7
3,066,632	+				+1.3
3,066,632	+				-1.2
3,066,632	+				-0.7
3,066,632	+				-0.8
3,066,632	+				+0.8
3,066,632	+				+0.4
3,066,632	+				-1.3
3,066,632	+				+1.1
3,066,632	+				-0.1
3,066,632	+				+2.5
3,066,632	+				-0.1
3,066,632	+				+1.1
3,066,632	+				-2.5
3,066,632	+				+0.8
3,066,632	+				+0.5
3,066,632	+				-0.7
3,066,632	+				+1.0
3,066,632	+				-0.4
3,066,633	-				-1.9
3,066,633	-				+0.5
3,066,633	-				-0.7
3,066,633	-				-1.6
3,066,633	-				+0.0
3,066,633	-				+0.5
3,066,633	-				+0.5
3,066,633	-				-0.9
3,066,633	-				-0.7
3,066,633	-				-1.8
3,066,633	-				-0.3
3,066,633	-				-0.7
3,066,633	-				-0.4
3,066,633	-				-1.3
3,066,633	-				-2.0
3,066,633	-				-1.8
3,066,691	+				+0.5
3,066,691	+				-0.9
3,066,692	-				-0.3
3,066,692	-				-0.1
3,066,771	+		OKGIIK_14105	0.15	-0.9
3,066,772	-		OKGIIK_14105	0.15	+0.3
3,066,772	-		OKGIIK_14105	0.15	+0.0
3,066,850	+		OKGIIK_14105	0.23	+0.9
3,066,850	+		OKGIIK_14105	0.23	-1.2
3,066,850	+		OKGIIK_14105	0.23	+1.3
3,066,850	+		OKGIIK_14105	0.23	-0.4
3,066,850	+		OKGIIK_14105	0.23	-1.6
3,066,850	+		OKGIIK_14105	0.23	-1.2
3,066,851	-		OKGIIK_14105	0.23	+0.7
3,066,851	-		OKGIIK_14105	0.23	+1.7
3,066,851	-		OKGIIK_14105	0.23	-0.3
3,066,851	-		OKGIIK_14105	0.23	+0.3
3,066,851	-		OKGIIK_14105	0.23	-0.9
3,066,851	-		OKGIIK_14105	0.23	+0.9
3,066,871	-		OKGIIK_14105	0.25	+0.4
3,066,900	+		OKGIIK_14105	0.28	-0.7
3,066,992	-		OKGIIK_14105	0.37	+1.2