Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_13920

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,023,805	+				-0.1
3,023,805	+				+0.1
3,023,805	+				-0.5
3,023,806	-				-0.4
3,023,806	-				-0.3
3,023,831	+				-0.3
3,023,831	+				-0.3
3,023,831	+				+0.1
3,023,832	-				+1.3
3,023,876	+				-0.1
3,023,877	-				-0.5
3,023,919	-		OKGIIK_13915	0.11	+0.7
3,023,919	-		OKGIIK_13915	0.11	+0.3
3,023,919	-		OKGIIK_13915	0.11	-0.1
3,024,047	+		OKGIIK_13915	0.30	+0.3
3,024,048	-		OKGIIK_13915	0.31	+0.7
3,024,512	+				+0.1
3,024,512	+				-0.1
3,024,512	+				-0.7
3,024,512	+				-0.3
3,024,513	-				-0.1
3,024,513	-				+0.1
3,024,513	-				-0.7
3,024,513	-				-0.5
3,024,513	-				+0.3
3,024,716	-				+0.3
3,024,783	+				+1.0
3,024,783	+				-0.3
3,024,783	+				+0.4
3,024,783	+				-1.7
3,024,784	-				+0.3
3,024,784	-				+0.8
3,024,784	-				+0.4
3,024,784	-				-1.2
3,024,784	-				-0.3
3,024,784	-				-1.5
3,024,784	-				+2.0
3,024,784	-				+1.9
3,024,784	-				+1.0
3,024,784	-				-0.9
3,024,784	-				-0.4
3,024,784	-				+1.6
3,024,815	+				-0.1
3,024,816	-				+1.9
3,024,880	+		OKGIIK_13920	0.15	-1.6
3,024,880	+		OKGIIK_13920	0.15	-0.7
3,024,881	-		OKGIIK_13920	0.15	-0.3
3,024,881	-		OKGIIK_13920	0.15	+0.3
3,024,943	+		OKGIIK_13920	0.25	-0.1
3,024,943	+		OKGIIK_13920	0.25	-0.1
3,024,943	+		OKGIIK_13920	0.25	+0.1
3,024,943	+		OKGIIK_13920	0.25	-1.3
3,024,943	+		OKGIIK_13920	0.25	+1.1
3,024,943	+		OKGIIK_13920	0.25	-0.1
3,024,943	+		OKGIIK_13920	0.25	-2.0
3,024,943	+		OKGIIK_13920	0.25	+2.7
3,024,943	+		OKGIIK_13920	0.25	+1.3
3,024,944	-		OKGIIK_13920	0.25	+1.9
3,024,944	-		OKGIIK_13920	0.25	+1.9
3,024,944	-		OKGIIK_13920	0.25	-0.5
3,024,944	-		OKGIIK_13920	0.25	-1.5
3,024,944	-		OKGIIK_13920	0.25	+1.1
3,024,944	-		OKGIIK_13920	0.25	-1.2
3,024,944	-		OKGIIK_13920	0.25	+0.5
3,024,944	-		OKGIIK_13920	0.25	-0.3
3,024,944	-		OKGIIK_13920	0.25	-0.9
3,024,944	-		OKGIIK_13920	0.25	+0.5
3,024,944	-		OKGIIK_13920	0.25	-0.1
3,024,944	-		OKGIIK_13920	0.25	+0.1
3,024,973	+		OKGIIK_13920	0.30	+2.3
3,024,973	+		OKGIIK_13920	0.30	-2.3
3,024,973	+		OKGIIK_13920	0.30	+0.7
3,024,974	-		OKGIIK_13920	0.30	+0.2
3,024,974	-		OKGIIK_13920	0.30	-0.8
3,024,974	-		OKGIIK_13920	0.30	-0.5
3,024,974	-		OKGIIK_13920	0.30	-1.2
3,024,974	-		OKGIIK_13920	0.30	-0.2
3,025,096	+		OKGIIK_13920	0.49	+1.1
3,025,096	+		OKGIIK_13920	0.49	-0.1
3,025,097	-		OKGIIK_13920	0.49	+0.9
3,025,097	-		OKGIIK_13920	0.49	-1.3
3,025,117	+		OKGIIK_13920	0.52	-1.1
3,025,117	+		OKGIIK_13920	0.52	+1.3
3,025,117	+		OKGIIK_13920	0.52	-1.3
3,025,117	+		OKGIIK_13920	0.52	+0.1
3,025,117	+		OKGIIK_13920	0.52	-0.5
3,025,117	+		OKGIIK_13920	0.52	-0.1
3,025,117	+		OKGIIK_13920	0.52	+1.9
3,025,118	-		OKGIIK_13920	0.53	-0.3
3,025,118	-		OKGIIK_13920	0.53	-0.7
3,025,118	-		OKGIIK_13920	0.53	-0.1
3,025,118	-		OKGIIK_13920	0.53	+0.6
3,025,118	-		OKGIIK_13920	0.53	-1.4
3,025,118	-		OKGIIK_13920	0.53	+0.9
3,025,118	-		OKGIIK_13920	0.53	+1.5
3,025,118	-		OKGIIK_13920	0.53	+1.6
3,025,118	-		OKGIIK_13920	0.53	-0.1
3,025,118	-		OKGIIK_13920	0.53	-0.1
3,025,118	-		OKGIIK_13920	0.53	+0.5
3,025,118	-		OKGIIK_13920	0.53	-0.3
3,025,118	-		OKGIIK_13920	0.53	+0.3
3,025,118	-		OKGIIK_13920	0.53	+2.5
3,025,118	-		OKGIIK_13920	0.53	-1.1
3,025,118	-		OKGIIK_13920	0.53	+1.8
3,025,118	-		OKGIIK_13920	0.53	+0.9
3,025,297	+		OKGIIK_13920	0.81	+0.5
3,025,298	-		OKGIIK_13920	0.81	+2.3
3,025,298	-		OKGIIK_13920	0.81	-0.2
3,025,341	+		OKGIIK_13920	0.88	-0.3
3,025,342	-		OKGIIK_13920	0.88	+0.9
3,025,342	-		OKGIIK_13920	0.88	-0.5
3,026,357	+		OKGIIK_13930	0.17	-1.3
3,026,357	+		OKGIIK_13930	0.17	+0.6
3,026,357	+		OKGIIK_13930	0.17	+0.3
3,026,357	+		OKGIIK_13930	0.17	+0.5
3,026,358	-		OKGIIK_13930	0.17	-0.1
3,026,398	+		OKGIIK_13930	0.20	-0.1
3,026,398	+		OKGIIK_13930	0.20	-0.9
3,026,398	+		OKGIIK_13930	0.20	-0.2
3,026,398	+		OKGIIK_13930	0.20	+1.7
3,026,398	+		OKGIIK_13930	0.20	-0.7
3,026,398	+		OKGIIK_13930	0.20	+0.7
3,026,398	+		OKGIIK_13930	0.20	+0.5
3,026,399	-		OKGIIK_13930	0.20	-0.3
3,026,413	+		OKGIIK_13930	0.21	-0.3