Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_13835

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,007,400	+		OKGIIK_13835	0.75	-0.8
3,007,401	-		OKGIIK_13835	0.75	+1.0
3,007,418	+				+1.2
3,007,418	+				-1.0
3,007,418	+				+0.2
3,007,418	+				-0.9
3,007,418	+				-2.1
3,007,418	+				-0.1
3,007,418	+				+0.7
3,007,418	+				+1.4
3,007,418	+				+0.7
3,007,418	+				+0.5
3,007,418	+				-0.5
3,007,418	+				-0.3
3,007,418	+				-0.3
3,007,418	+				-1.8
3,007,418	+				+0.4
3,007,418	+				+0.9
3,007,418	+				-0.1
3,007,418	+				+1.2
3,007,418	+				+0.4
3,007,419	-				+0.1
3,007,419	-				-0.6
3,007,419	-				+0.0
3,007,419	-				-0.1
3,007,419	-				-2.0
3,007,529	+				+0.1
3,007,529	+				+1.9
3,007,530	-				-0.1
3,007,530	-				-0.6
3,007,587	+				+0.9
3,007,587	+				+0.4
3,007,588	-				-0.5
3,007,588	-				-1.0
3,007,588	-				-1.5
3,007,588	-				-1.3
3,007,588	-				-0.3
3,007,588	-				+0.1
3,007,596	+				-1.8
3,007,597	-				+0.8
3,007,597	-				-0.9
3,007,597	-				-0.6
3,007,611	+				-0.3
3,007,612	-				-3.5
3,007,857	+	tagB	OKGIIK_13840	0.28	-2.1
3,007,857	+	tagB	OKGIIK_13840	0.28	+0.4
3,007,857	+	tagB	OKGIIK_13840	0.28	-0.1
3,007,857	+	tagB	OKGIIK_13840	0.28	+0.1
3,007,857	+	tagB	OKGIIK_13840	0.28	-1.0
3,007,857	+	tagB	OKGIIK_13840	0.28	+0.7
3,007,857	+	tagB	OKGIIK_13840	0.28	-1.1
3,007,857	+	tagB	OKGIIK_13840	0.28	-0.2
3,007,857	+	tagB	OKGIIK_13840	0.28	-0.7
3,007,857	+	tagB	OKGIIK_13840	0.28	-1.8
3,007,857	+	tagB	OKGIIK_13840	0.28	+0.2
3,007,858	-	tagB	OKGIIK_13840	0.28	+0.2
3,007,858	-	tagB	OKGIIK_13840	0.28	-0.9
3,007,858	-	tagB	OKGIIK_13840	0.28	-0.2
3,007,858	-	tagB	OKGIIK_13840	0.28	-0.7
3,007,858	-	tagB	OKGIIK_13840	0.28	-2.7
3,007,858	-	tagB	OKGIIK_13840	0.28	+1.9
3,007,858	-	tagB	OKGIIK_13840	0.28	-2.1
3,007,881	+	tagB	OKGIIK_13840	0.30	-0.9
3,007,881	+	tagB	OKGIIK_13840	0.30	+0.4
3,007,881	+	tagB	OKGIIK_13840	0.30	+0.1
3,007,881	+	tagB	OKGIIK_13840	0.30	-0.6
3,007,882	-	tagB	OKGIIK_13840	0.30	-0.9
3,007,882	-	tagB	OKGIIK_13840	0.30	-0.6
3,007,882	-	tagB	OKGIIK_13840	0.30	-0.8
3,007,882	-	tagB	OKGIIK_13840	0.30	+0.7
3,008,040	+	tagB	OKGIIK_13840	0.46	+0.2
3,008,040	+	tagB	OKGIIK_13840	0.46	-0.7
3,008,040	+	tagB	OKGIIK_13840	0.46	-0.2
3,008,040	+	tagB	OKGIIK_13840	0.46	-0.1
3,008,041	-	tagB	OKGIIK_13840	0.46	+0.7
3,008,041	-	tagB	OKGIIK_13840	0.46	+0.4
3,008,041	-	tagB	OKGIIK_13840	0.46	-1.8
3,008,041	-	tagB	OKGIIK_13840	0.46	-1.9
3,008,041	-	tagB	OKGIIK_13840	0.46	-1.1
3,008,041	-	tagB	OKGIIK_13840	0.46	+0.2
3,008,085	+	tagB	OKGIIK_13840	0.50	-0.8
3,008,085	+	tagB	OKGIIK_13840	0.50	+0.2
3,008,085	+	tagB	OKGIIK_13840	0.50	+1.2
3,008,085	+	tagB	OKGIIK_13840	0.50	-1.6
3,008,085	+	tagB	OKGIIK_13840	0.50	-0.9
3,008,086	-	tagB	OKGIIK_13840	0.50	+0.4
3,008,086	-	tagB	OKGIIK_13840	0.50	-0.8
3,008,086	-	tagB	OKGIIK_13840	0.50	-0.6
3,008,086	-	tagB	OKGIIK_13840	0.50	-0.6
3,008,086	-	tagB	OKGIIK_13840	0.50	-1.6
3,008,086	-	tagB	OKGIIK_13840	0.50	-0.2
3,008,086	-	tagB	OKGIIK_13840	0.50	-0.2
3,008,086	-	tagB	OKGIIK_13840	0.50	-1.1
3,008,086	-	tagB	OKGIIK_13840	0.50	-1.1
3,008,086	-	tagB	OKGIIK_13840	0.50	-0.8
3,008,086	-	tagB	OKGIIK_13840	0.50	-0.1
3,008,086	-	tagB	OKGIIK_13840	0.50	+1.2
3,008,196	+	tagB	OKGIIK_13840	0.61	+0.0
3,008,196	+	tagB	OKGIIK_13840	0.61	-0.5
3,008,196	+	tagB	OKGIIK_13840	0.61	-0.7
3,008,197	-	tagB	OKGIIK_13840	0.61	-1.3
3,008,197	-	tagB	OKGIIK_13840	0.61	-1.3
3,008,197	-	tagB	OKGIIK_13840	0.61	-1.8
3,008,197	-	tagB	OKGIIK_13840	0.61	-0.0
3,008,197	-	tagB	OKGIIK_13840	0.61	-0.3
3,008,197	-	tagB	OKGIIK_13840	0.61	-1.8
3,008,197	-	tagB	OKGIIK_13840	0.61	+1.2
3,008,197	-	tagB	OKGIIK_13840	0.61	-1.1