Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_13575

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,941,400	+	thrC	OKGIIK_13570	0.74	-1.1
2,941,746	-				+1.0
2,941,746	-				-2.1
2,941,746	-				-0.1
2,941,746	-				+0.4
2,941,746	-				-0.2
2,941,746	-				-0.1
2,941,780	+				-0.6
2,941,780	+				-0.6
2,941,780	+				-1.1
2,941,781	-				-1.5
2,941,781	-				+0.3
2,941,781	-				+0.1
2,941,781	-				-1.8
2,941,782	+				-1.6
2,941,782	+				-1.7
2,941,782	+				-0.6
2,941,782	+				-0.3
2,941,782	+				+0.2
2,941,782	+				+1.1
2,941,782	+				-0.2
2,941,783	-				-0.6
2,941,783	-				+0.2
2,941,783	-				-1.2
2,941,783	-				+0.2
2,941,812	+				-0.3
2,941,812	+				+0.2
2,941,812	+				-0.3
2,941,960	-				+0.2
2,941,960	-				-0.6
2,941,960	-				-0.1
2,942,061	+				+0.7
2,942,061	+				-0.5
2,942,061	+				-0.1
2,942,061	+				-2.0
2,942,061	+				-0.9
2,942,061	+				+0.5
2,942,061	+				+0.1
2,942,062	-				+0.4
2,942,062	-				+1.2
2,942,062	-				+0.2
2,942,062	-				+1.2
2,942,062	-				+0.2
2,942,062	-				-0.9
2,942,062	-				-0.9
2,942,065	-				+0.9
2,942,065	-				+0.9
2,942,065	-				-0.1
2,942,073	-				-0.9
2,942,073	-				-0.5
2,942,073	-				-1.3
2,942,078	+				+0.2
2,942,079	-				+1.2
2,942,085	+				+1.0
2,942,085	+				-0.3
2,942,085	+				-0.7
2,942,086	-				+0.2
2,942,086	-				-0.1
2,942,086	-				-1.5
2,942,086	-				-0.6
2,942,086	-				+1.0
2,942,086	-				-0.7
2,942,088	+				+0.3
2,942,089	-				-0.1
2,942,089	-				+0.3
2,942,126	-				-0.3
2,942,126	-				+0.8
2,942,130	-				-1.6
2,942,130	-				+0.9
2,942,130	-				+0.4
2,942,267	+				+0.4
2,942,268	-				-0.9
2,942,788	+	leuA	OKGIIK_13575	0.34	-0.3
2,942,788	+	leuA	OKGIIK_13575	0.34	+0.8
2,942,789	-	leuA	OKGIIK_13575	0.34	-1.7
2,942,824	+	leuA	OKGIIK_13575	0.36	-1.0
2,942,824	+	leuA	OKGIIK_13575	0.36	+0.3
2,942,825	-	leuA	OKGIIK_13575	0.36	+0.6
2,942,825	-	leuA	OKGIIK_13575	0.36	-0.2
2,942,825	-	leuA	OKGIIK_13575	0.36	+0.2
2,943,067	+	leuA	OKGIIK_13575	0.51	+0.7
2,943,067	+	leuA	OKGIIK_13575	0.51	+0.4
2,943,199	+	leuA	OKGIIK_13575	0.59	+1.2
2,943,199	+	leuA	OKGIIK_13575	0.59	+0.2
2,943,200	-	leuA	OKGIIK_13575	0.59	-0.5
2,943,200	-	leuA	OKGIIK_13575	0.59	+1.6
2,943,200	-	leuA	OKGIIK_13575	0.59	-1.3
2,943,200	-	leuA	OKGIIK_13575	0.59	-0.1
2,943,200	-	leuA	OKGIIK_13575	0.59	-0.8
2,943,200	-	leuA	OKGIIK_13575	0.59	-0.7
2,943,200	-	leuA	OKGIIK_13575	0.59	+2.6
2,943,958	-				-0.1
2,943,958	-				-0.9
2,943,958	-				+0.2
2,943,990	+	ilvE	OKGIIK_13580	0.12	+1.0
2,943,990	+	ilvE	OKGIIK_13580	0.12	-0.8
2,943,990	+	ilvE	OKGIIK_13580	0.12	-0.9
2,943,990	+	ilvE	OKGIIK_13580	0.12	-0.7
2,943,990	+	ilvE	OKGIIK_13580	0.12	+0.2
2,943,990	+	ilvE	OKGIIK_13580	0.12	-1.1
2,943,991	-	ilvE	OKGIIK_13580	0.12	-1.3
2,943,991	-	ilvE	OKGIIK_13580	0.12	-1.9
2,943,991	-	ilvE	OKGIIK_13580	0.12	+1.8
2,943,991	-	ilvE	OKGIIK_13580	0.12	+1.8
2,943,991	-	ilvE	OKGIIK_13580	0.12	+0.0
2,944,014	+	ilvE	OKGIIK_13580	0.14	-1.8
2,944,014	+	ilvE	OKGIIK_13580	0.14	-1.5
2,944,015	-	ilvE	OKGIIK_13580	0.14	-1.8
2,944,015	-	ilvE	OKGIIK_13580	0.14	-0.3
2,944,015	-	ilvE	OKGIIK_13580	0.14	-2.1
2,944,149	+	ilvE	OKGIIK_13580	0.28	-0.5
2,944,149	+	ilvE	OKGIIK_13580	0.28	-0.3
2,944,149	+	ilvE	OKGIIK_13580	0.28	+0.9
2,944,149	+	ilvE	OKGIIK_13580	0.28	-0.9
2,944,149	+	ilvE	OKGIIK_13580	0.28	+1.1
2,944,149	+	ilvE	OKGIIK_13580	0.28	-0.1
2,944,149	+	ilvE	OKGIIK_13580	0.28	-0.6
2,944,150	-	ilvE	OKGIIK_13580	0.28	-2.1
2,944,150	-	ilvE	OKGIIK_13580	0.28	+0.5
2,944,150	-	ilvE	OKGIIK_13580	0.28	-0.8
2,944,150	-	ilvE	OKGIIK_13580	0.28	+0.2
2,944,150	-	ilvE	OKGIIK_13580	0.28	-1.2
2,944,150	-	ilvE	OKGIIK_13580	0.28	-2.4
2,944,150	-	ilvE	OKGIIK_13580	0.28	-0.3
2,944,150	-	ilvE	OKGIIK_13580	0.28	-0.2
2,944,150	-	ilvE	OKGIIK_13580	0.28	-2.9
2,944,251	+	ilvE	OKGIIK_13580	0.38	+0.3
2,944,251	+	ilvE	OKGIIK_13580	0.38	-0.1
2,944,251	+	ilvE	OKGIIK_13580	0.38	-0.4
2,944,251	+	ilvE	OKGIIK_13580	0.38	-1.1
2,944,251	+	ilvE	OKGIIK_13580	0.38	-0.1
2,944,251	+	ilvE	OKGIIK_13580	0.38	-0.3
2,944,252	-	ilvE	OKGIIK_13580	0.38	-0.2
2,944,252	-	ilvE	OKGIIK_13580	0.38	+0.2
2,944,353	+	ilvE	OKGIIK_13580	0.48	+0.8
2,944,353	+	ilvE	OKGIIK_13580	0.48	-0.3
2,944,353	+	ilvE	OKGIIK_13580	0.48	+0.2
2,944,353	+	ilvE	OKGIIK_13580	0.48	+0.1
2,944,353	+	ilvE	OKGIIK_13580	0.48	+0.4
2,944,353	+	ilvE	OKGIIK_13580	0.48	-0.9
2,944,354	-	ilvE	OKGIIK_13580	0.48	+0.2
2,944,354	-	ilvE	OKGIIK_13580	0.48	+0.7
2,944,354	-	ilvE	OKGIIK_13580	0.48	+0.5
2,944,354	-	ilvE	OKGIIK_13580	0.48	+0.0
2,944,354	-	ilvE	OKGIIK_13580	0.48	-0.1
2,944,354	-	ilvE	OKGIIK_13580	0.48	-2.3
2,944,354	-	ilvE	OKGIIK_13580	0.48	-0.3
2,944,354	-	ilvE	OKGIIK_13580	0.48	-0.1
2,944,602	+	ilvE	OKGIIK_13580	0.73	-2.3
2,944,603	-	ilvE	OKGIIK_13580	0.73	-1.3