Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_13560

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,937,196	+		OKGIIK_13555	0.22	-1.8
2,937,196	+		OKGIIK_13555	0.22	-0.5
2,937,196	+		OKGIIK_13555	0.22	+0.7
2,937,196	+		OKGIIK_13555	0.22	-0.8
2,937,196	+		OKGIIK_13555	0.22	-1.6
2,937,197	-		OKGIIK_13555	0.22	-0.3
2,937,197	-		OKGIIK_13555	0.22	-0.8
2,937,197	-		OKGIIK_13555	0.22	-1.5
2,937,197	-		OKGIIK_13555	0.22	-0.8
2,937,197	-		OKGIIK_13555	0.22	-1.6
2,937,253	+		OKGIIK_13555	0.30	-0.8
2,937,253	+		OKGIIK_13555	0.30	-0.1
2,937,253	+		OKGIIK_13555	0.30	-2.4
2,937,253	+		OKGIIK_13555	0.30	+0.3
2,937,253	+		OKGIIK_13555	0.30	-0.3
2,937,253	+		OKGIIK_13555	0.30	+0.5
2,937,254	-		OKGIIK_13555	0.30	-0.9
2,937,254	-		OKGIIK_13555	0.30	-1.9
2,937,254	-		OKGIIK_13555	0.30	-0.5
2,937,254	-		OKGIIK_13555	0.30	-0.5
2,937,254	-		OKGIIK_13555	0.30	+1.3
2,937,254	-		OKGIIK_13555	0.30	-0.5
2,937,259	+		OKGIIK_13555	0.31	-1.1
2,937,259	+		OKGIIK_13555	0.31	-0.6
2,937,259	+		OKGIIK_13555	0.31	-2.2
2,937,259	+		OKGIIK_13555	0.31	-1.6
2,937,259	+		OKGIIK_13555	0.31	-3.1
2,937,259	+		OKGIIK_13555	0.31	+0.9
2,937,259	+		OKGIIK_13555	0.31	-0.8
2,937,259	+		OKGIIK_13555	0.31	-0.8
2,937,260	-		OKGIIK_13555	0.31	+1.5
2,937,260	-		OKGIIK_13555	0.31	-0.9
2,937,260	-		OKGIIK_13555	0.31	-1.9
2,937,260	-		OKGIIK_13555	0.31	-0.5
2,937,260	-		OKGIIK_13555	0.31	-0.5
2,937,260	-		OKGIIK_13555	0.31	+0.5
2,937,260	-		OKGIIK_13555	0.31	+0.5
2,937,260	-		OKGIIK_13555	0.31	-1.8
2,937,448	+		OKGIIK_13555	0.56	-1.1
2,937,448	+		OKGIIK_13555	0.56	-0.5
2,937,449	-		OKGIIK_13555	0.56	-0.6
2,937,449	-		OKGIIK_13555	0.56	-0.5
2,937,449	-		OKGIIK_13555	0.56	-0.8
2,937,469	+		OKGIIK_13555	0.58	-1.3
2,937,469	+		OKGIIK_13555	0.58	+0.4
2,937,469	+		OKGIIK_13555	0.58	-1.1
2,937,469	+		OKGIIK_13555	0.58	-0.6
2,937,469	+		OKGIIK_13555	0.58	-0.8
2,937,469	+		OKGIIK_13555	0.58	-1.1
2,937,469	+		OKGIIK_13555	0.58	-0.1
2,937,470	-		OKGIIK_13555	0.59	-0.9
2,937,470	-		OKGIIK_13555	0.59	+1.2
2,937,470	-		OKGIIK_13555	0.59	-0.8
2,937,470	-		OKGIIK_13555	0.59	-1.5
2,937,493	+		OKGIIK_13555	0.62	-0.1
2,937,496	+		OKGIIK_13555	0.62	-2.9
2,937,496	+		OKGIIK_13555	0.62	-0.8
2,937,496	+		OKGIIK_13555	0.62	-0.6
2,937,496	+		OKGIIK_13555	0.62	-1.1
2,937,496	+		OKGIIK_13555	0.62	+0.3
2,937,496	+		OKGIIK_13555	0.62	+0.4
2,937,496	+		OKGIIK_13555	0.62	-0.6
2,937,496	+		OKGIIK_13555	0.62	-2.1
2,937,496	+		OKGIIK_13555	0.62	-0.2
2,937,496	+		OKGIIK_13555	0.62	-1.9
2,937,496	+		OKGIIK_13555	0.62	+0.3
2,937,496	+		OKGIIK_13555	0.62	-1.6
2,937,496	+		OKGIIK_13555	0.62	-0.4
2,937,496	+		OKGIIK_13555	0.62	+0.1
2,937,496	+		OKGIIK_13555	0.62	-1.1
2,937,496	+		OKGIIK_13555	0.62	-2.9
2,937,496	+		OKGIIK_13555	0.62	+0.7
2,937,496	+		OKGIIK_13555	0.62	-1.6
2,937,496	+		OKGIIK_13555	0.62	+0.2
2,937,496	+		OKGIIK_13555	0.62	-0.3
2,937,496	+		OKGIIK_13555	0.62	+0.3
2,937,496	+		OKGIIK_13555	0.62	+1.3
2,937,497	-		OKGIIK_13555	0.62	-0.6
2,937,497	-		OKGIIK_13555	0.62	-0.5
2,937,497	-		OKGIIK_13555	0.62	-0.5
2,937,497	-		OKGIIK_13555	0.62	-0.5
2,937,497	-		OKGIIK_13555	0.62	-0.3
2,937,497	-		OKGIIK_13555	0.62	-1.0
2,937,497	-		OKGIIK_13555	0.62	-0.8
2,937,497	-		OKGIIK_13555	0.62	+0.1
2,937,497	-		OKGIIK_13555	0.62	-0.5
2,937,497	-		OKGIIK_13555	0.62	-2.6
2,937,497	-		OKGIIK_13555	0.62	-1.6
2,937,497	-		OKGIIK_13555	0.62	-2.4
2,937,497	-		OKGIIK_13555	0.62	-1.1
2,937,497	-		OKGIIK_13555	0.62	-0.7
2,937,497	-		OKGIIK_13555	0.62	-0.5
2,937,497	-		OKGIIK_13555	0.62	-0.6
2,937,497	-		OKGIIK_13555	0.62	-1.5
2,937,497	-		OKGIIK_13555	0.62	-1.3
2,937,497	-		OKGIIK_13555	0.62	-0.8
2,937,497	-		OKGIIK_13555	0.62	-1.7
2,937,497	-		OKGIIK_13555	0.62	-1.0
2,937,497	-		OKGIIK_13555	0.62	-0.3
2,937,497	-		OKGIIK_13555	0.62	-0.5
2,937,497	-		OKGIIK_13555	0.62	-1.7
2,937,497	-		OKGIIK_13555	0.62	-1.6
2,937,535	+		OKGIIK_13555	0.67	-2.5
2,937,535	+		OKGIIK_13555	0.67	+0.5
2,937,535	+		OKGIIK_13555	0.67	-0.3
2,937,535	+		OKGIIK_13555	0.67	-0.5
2,937,535	+		OKGIIK_13555	0.67	+1.1
2,937,535	+		OKGIIK_13555	0.67	+1.1
2,937,536	-		OKGIIK_13555	0.67	-2.8
2,937,536	-		OKGIIK_13555	0.67	-2.3
2,937,536	-		OKGIIK_13555	0.67	+0.2
2,937,536	-		OKGIIK_13555	0.67	-1.6
2,937,536	-		OKGIIK_13555	0.67	-0.1
2,937,538	-		OKGIIK_13555	0.68	-1.9
2,937,556	+		OKGIIK_13555	0.70	-0.4
2,937,556	+		OKGIIK_13555	0.70	-0.5
2,937,662	+		OKGIIK_13555	0.84	-0.7
2,937,663	-		OKGIIK_13555	0.84	-0.8
2,937,663	-		OKGIIK_13555	0.84	-0.8
2,937,663	-		OKGIIK_13555	0.84	-0.5
2,937,793	+				-0.6
2,937,793	+				-3.1
2,937,793	+				-1.3
2,937,793	+				+0.2
2,937,793	+				-1.0
2,937,793	+				-1.3
2,937,793	+				-1.0
2,937,793	+				+1.5
2,937,794	-				-0.5
2,937,794	-				-1.5
2,937,794	-				-0.4
2,937,932	+				+0.5
2,937,933	-				+1.2
2,937,933	-				-0.8
2,938,037	+				-0.5
2,938,037	+				-0.5
2,938,037	+				-0.6
2,938,037	+				-1.2
2,938,038	-				+0.1
2,938,038	-				-1.1
2,938,038	-				-0.5
2,938,038	-				-2.3
2,938,038	-				-0.8
2,938,049	+				+0.0
2,938,049	+				+0.5
2,938,049	+				+0.0
2,938,049	+				+0.5
2,938,049	+				-0.8
2,938,050	-				-0.5
2,938,050	-				-3.2
2,938,050	-				-0.6
2,938,050	-				-0.1
2,938,058	+				-0.8
2,938,088	+				-0.5
2,938,088	+				-1.1
2,938,088	+				-1.5
2,938,088	+				-2.2
2,938,088	+				-0.8
2,938,088	+				-1.3
2,938,088	+				+0.5
2,938,088	+				-0.5
2,938,088	+				-1.1
2,938,088	+				-0.9
2,938,088	+				-1.5
2,938,088	+				-0.8
2,938,088	+				+0.2
2,938,088	+				-2.7
2,938,088	+				-0.5
2,938,089	-				-2.4
2,938,089	-				-0.5
2,938,089	-				-1.1
2,938,089	-				+0.2
2,938,089	-				-1.1
2,938,089	-				-0.3
2,938,089	-				-2.5
2,938,089	-				+0.1
2,938,372	+	thrA	OKGIIK_13560	0.19	+0.8
2,938,372	+	thrA	OKGIIK_13560	0.19	+0.8
2,938,372	+	thrA	OKGIIK_13560	0.19	+0.1
2,938,373	-	thrA	OKGIIK_13560	0.20	-0.9
2,938,373	-	thrA	OKGIIK_13560	0.20	-0.8
2,938,373	-	thrA	OKGIIK_13560	0.20	-1.6
2,938,685	+	thrA	OKGIIK_13560	0.46	-1.5
2,938,685	+	thrA	OKGIIK_13560	0.46	-1.3
2,938,719	+	thrA	OKGIIK_13560	0.48	-1.3
2,938,719	+	thrA	OKGIIK_13560	0.48	-2.6
2,938,719	+	thrA	OKGIIK_13560	0.48	-1.3
2,938,719	+	thrA	OKGIIK_13560	0.48	-1.6
2,938,719	+	thrA	OKGIIK_13560	0.48	-0.8
2,938,719	+	thrA	OKGIIK_13560	0.48	-1.5
2,938,719	+	thrA	OKGIIK_13560	0.48	-0.5
2,938,719	+	thrA	OKGIIK_13560	0.48	-0.3
2,938,719	+	thrA	OKGIIK_13560	0.48	-1.1
2,938,719	+	thrA	OKGIIK_13560	0.48	-3.6
2,938,720	-	thrA	OKGIIK_13560	0.49	-1.6
2,938,720	-	thrA	OKGIIK_13560	0.49	-0.6
2,938,720	-	thrA	OKGIIK_13560	0.49	+0.3
2,938,720	-	thrA	OKGIIK_13560	0.49	+0.5
2,938,720	-	thrA	OKGIIK_13560	0.49	-1.3
2,938,720	-	thrA	OKGIIK_13560	0.49	-1.5
2,938,720	-	thrA	OKGIIK_13560	0.49	-0.8
2,938,865	+	thrA	OKGIIK_13560	0.61	-0.8
2,938,865	+	thrA	OKGIIK_13560	0.61	-0.5
2,938,865	+	thrA	OKGIIK_13560	0.61	-0.5
2,938,865	+	thrA	OKGIIK_13560	0.61	-2.7
2,938,865	+	thrA	OKGIIK_13560	0.61	-1.1
2,938,865	+	thrA	OKGIIK_13560	0.61	-0.5
2,938,865	+	thrA	OKGIIK_13560	0.61	-1.1
2,938,866	-	thrA	OKGIIK_13560	0.61	-2.1
2,938,866	-	thrA	OKGIIK_13560	0.61	-1.3
2,938,866	-	thrA	OKGIIK_13560	0.61	-1.8
2,938,866	-	thrA	OKGIIK_13560	0.61	-1.1
2,938,866	-	thrA	OKGIIK_13560	0.61	-0.5
2,938,866	-	thrA	OKGIIK_13560	0.61	-1.1
2,938,867	+	thrA	OKGIIK_13560	0.61	-0.8
2,938,868	-	thrA	OKGIIK_13560	0.61	-1.6
2,939,222	+				-1.5
2,939,223	-				-0.8
2,939,223	-				-0.3
2,939,230	+				-0.5
2,939,231	-				-1.3
2,939,231	-				-1.3
2,939,752	+	thrB	OKGIIK_13565	0.42	-0.8
2,939,752	+	thrB	OKGIIK_13565	0.42	-1.3
2,939,752	+	thrB	OKGIIK_13565	0.42	-0.5
2,939,752	+	thrB	OKGIIK_13565	0.42	-0.5
2,939,753	-	thrB	OKGIIK_13565	0.42	-1.3
2,939,753	-	thrB	OKGIIK_13565	0.42	-0.5
2,939,753	-	thrB	OKGIIK_13565	0.42	-1.6
2,939,956	+	thrB	OKGIIK_13565	0.63	-1.1
2,939,957	-	thrB	OKGIIK_13565	0.63	-2.4
2,940,181	+	thrB	OKGIIK_13565	0.85	-1.5
2,940,182	-	thrB	OKGIIK_13565	0.86	-1.1
2,940,182	-	thrB	OKGIIK_13565	0.86	-1.1
2,940,182	-	thrB	OKGIIK_13565	0.86	-2.3
2,940,334	+				-1.6
2,940,334	+				-2.1
2,940,334	+				+0.2
2,940,334	+				+1.3
2,940,334	+				+0.5
2,940,335	-				-1.6
2,940,335	-				-0.5