Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12885

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,780,523	+		OKGIIK_12875	0.74	-1.0
2,780,523	+		OKGIIK_12875	0.74	-1.6
2,780,523	+		OKGIIK_12875	0.74	-1.0
2,780,523	+		OKGIIK_12875	0.74	-2.1
2,780,523	+		OKGIIK_12875	0.74	-0.8
2,780,523	+		OKGIIK_12875	0.74	-0.6
2,780,523	+		OKGIIK_12875	0.74	-1.3
2,780,524	-		OKGIIK_12875	0.74	+1.3
2,780,524	-		OKGIIK_12875	0.74	-0.9
2,780,524	-		OKGIIK_12875	0.74	+0.8
2,780,524	-		OKGIIK_12875	0.74	-1.1
2,780,524	-		OKGIIK_12875	0.74	+0.2
2,780,524	-		OKGIIK_12875	0.74	-1.6
2,780,524	-		OKGIIK_12875	0.74	+0.8
2,780,524	-		OKGIIK_12875	0.74	-1.0
2,780,524	-		OKGIIK_12875	0.74	-1.1
2,780,677	+				-0.8
2,780,677	+				-1.7
2,780,677	+				-0.1
2,780,701	-				-0.1
2,780,701	-				-0.4
2,780,701	-				-2.1
2,780,701	-				-0.3
2,780,856	+		OKGIIK_12880	0.21	-0.0
2,780,856	+		OKGIIK_12880	0.21	-0.4
2,780,857	-		OKGIIK_12880	0.21	-3.8
2,780,857	-		OKGIIK_12880	0.21	-1.3
2,780,857	-		OKGIIK_12880	0.21	+0.4
2,780,866	+		OKGIIK_12880	0.22	-2.7
2,780,866	+		OKGIIK_12880	0.22	-0.6
2,780,866	+		OKGIIK_12880	0.22	-0.4
2,780,866	+		OKGIIK_12880	0.22	-0.6
2,780,934	+		OKGIIK_12880	0.34	-0.8
2,780,934	+		OKGIIK_12880	0.34	-0.4
2,780,934	+		OKGIIK_12880	0.34	-1.0
2,780,934	+		OKGIIK_12880	0.34	-0.4
2,780,934	+		OKGIIK_12880	0.34	-0.8
2,780,934	+		OKGIIK_12880	0.34	-1.3
2,780,934	+		OKGIIK_12880	0.34	-1.4
2,780,934	+		OKGIIK_12880	0.34	-0.3
2,780,934	+		OKGIIK_12880	0.34	-0.8
2,780,934	+		OKGIIK_12880	0.34	-1.1
2,780,934	+		OKGIIK_12880	0.34	-1.3
2,780,934	+		OKGIIK_12880	0.34	-1.1
2,780,934	+		OKGIIK_12880	0.34	-0.8
2,780,934	+		OKGIIK_12880	0.34	-1.9
2,780,934	+		OKGIIK_12880	0.34	-2.0
2,780,934	+		OKGIIK_12880	0.34	-2.8
2,780,934	+		OKGIIK_12880	0.34	-0.8
2,780,934	+		OKGIIK_12880	0.34	-0.6
2,780,934	+		OKGIIK_12880	0.34	-1.8
2,780,935	-		OKGIIK_12880	0.34	-0.4
2,780,935	-		OKGIIK_12880	0.34	-0.4
2,780,935	-		OKGIIK_12880	0.34	-0.4
2,780,935	-		OKGIIK_12880	0.34	-0.3
2,780,935	-		OKGIIK_12880	0.34	+0.8
2,780,935	-		OKGIIK_12880	0.34	-1.0
2,780,935	-		OKGIIK_12880	0.34	-1.4
2,780,935	-		OKGIIK_12880	0.34	+0.6
2,780,935	-		OKGIIK_12880	0.34	-2.0
2,780,935	-		OKGIIK_12880	0.34	-0.4
2,780,935	-		OKGIIK_12880	0.34	-2.3
2,781,009	+		OKGIIK_12880	0.47	-2.3
2,781,009	+		OKGIIK_12880	0.47	-1.3
2,781,009	+		OKGIIK_12880	0.47	-0.0
2,781,009	+		OKGIIK_12880	0.47	+0.8
2,781,009	+		OKGIIK_12880	0.47	-1.0
2,781,009	+		OKGIIK_12880	0.47	-0.6
2,781,009	+		OKGIIK_12880	0.47	-0.4
2,781,009	+		OKGIIK_12880	0.47	-0.8
2,781,009	+		OKGIIK_12880	0.47	-0.4
2,781,009	+		OKGIIK_12880	0.47	+0.8
2,781,009	+		OKGIIK_12880	0.47	-1.8
2,781,009	+		OKGIIK_12880	0.47	-1.4
2,781,009	+		OKGIIK_12880	0.47	-1.0
2,781,009	+		OKGIIK_12880	0.47	-0.8
2,781,010	-		OKGIIK_12880	0.47	-1.3
2,781,010	-		OKGIIK_12880	0.47	-0.4
2,781,010	-		OKGIIK_12880	0.47	-2.1
2,781,010	-		OKGIIK_12880	0.47	-1.0
2,781,010	-		OKGIIK_12880	0.47	+0.2
2,781,010	-		OKGIIK_12880	0.47	+0.1
2,781,010	-		OKGIIK_12880	0.47	-0.0
2,781,010	-		OKGIIK_12880	0.47	-2.5
2,781,010	-		OKGIIK_12880	0.47	-2.4
2,781,010	-		OKGIIK_12880	0.47	-0.8
2,781,010	-		OKGIIK_12880	0.47	-1.0
2,781,198	+		OKGIIK_12880	0.80	-2.7
2,781,198	+		OKGIIK_12880	0.80	-0.8
2,781,199	-		OKGIIK_12880	0.80	-0.8
2,781,199	-		OKGIIK_12880	0.80	-1.4
2,781,356	+				-1.8
2,781,356	+				-0.4
2,781,357	-				-1.8
2,781,357	-				+0.2
2,781,528	+		OKGIIK_12885	0.67	-3.8
2,781,529	-		OKGIIK_12885	0.68	-1.4
2,781,529	-		OKGIIK_12885	0.68	-1.6
2,781,529	-		OKGIIK_12885	0.68	-1.9
2,781,590	+				-2.4
2,781,590	+				+3.8
2,781,590	+				-0.6
2,781,590	+				+0.1
2,781,650	+				-1.8
2,781,650	+				-0.8
2,781,683	-				-1.6
2,781,693	+				-2.5
2,781,693	+				-0.0
2,781,693	+				-1.5
2,781,693	+				-1.8
2,781,693	+				-2.1
2,781,693	+				-0.4
2,781,693	+				-0.4
2,781,693	+				+0.2
2,781,693	+				-2.5
2,781,693	+				-1.0
2,781,693	+				-0.0
2,781,698	+				-1.7
2,781,698	+				-0.4
2,781,698	+				-1.4
2,781,698	+				+1.6
2,781,698	+				+1.0
2,781,786	+				-1.4
2,781,787	-				+0.2
2,781,787	-				-2.0
2,781,813	+				+0.2
2,781,814	-				-0.8
2,781,828	+				-0.8
2,781,828	+				+1.2
2,781,829	-				-1.0
2,781,829	-				-1.4
2,781,829	-				-1.3
2,781,832	+				+0.6
2,781,832	+				-3.0
2,781,832	+				+0.1
2,781,832	+				-0.4
2,781,832	+				-2.1
2,781,832	+				-0.4
2,781,832	+				-1.0
2,781,832	+				-0.8
2,781,832	+				-0.6
2,781,832	+				-1.5
2,781,832	+				-0.4
2,781,832	+				-0.8
2,781,832	+				-0.3
2,781,832	+				-3.6
2,781,832	+				+1.0
2,781,833	-				+1.0
2,781,833	-				-0.7
2,781,833	-				+0.8
2,781,833	-				-0.4
2,781,833	-				-0.9
2,781,833	-				-1.9
2,781,833	-				-1.0
2,781,833	-				-1.2
2,781,833	-				-0.4
2,781,833	-				+0.2
2,781,863	+				-0.4
2,781,863	+				-1.1
2,781,863	+				-0.3
2,781,864	-				-0.8
2,781,864	-				-2.0
2,781,864	-				+1.0
2,781,864	-				-1.0
2,781,864	-				+0.2
2,781,896	+				-0.8
2,781,896	+				-1.0
2,781,896	+				-1.0
2,781,896	+				-1.4
2,781,896	+				-1.5
2,781,896	+				-1.0
2,781,896	+				-1.3
2,781,896	+				+0.2
2,781,896	+				-1.9
2,781,896	+				-1.8
2,781,897	-				-1.1
2,781,897	-				-0.8
2,781,897	-				-2.0
2,781,897	-				-0.1
2,781,897	-				-0.4
2,781,897	-				-0.8
2,781,897	-				+0.2
2,781,897	-				-1.3
2,781,897	-				-0.0
2,781,932	+				+1.0
2,781,932	+				-1.8
2,781,933	-				-1.4
2,781,933	-				+0.3
2,781,963	+				-2.1
2,781,963	+				-1.8
2,781,963	+				+1.2
2,781,963	+				+1.1
2,781,964	-				-0.4
2,782,397	-		OKGIIK_12890	0.52	+0.9
2,782,397	-		OKGIIK_12890	0.52	-0.4
2,782,397	-		OKGIIK_12890	0.52	-2.8
2,782,469	+		OKGIIK_12890	0.61	-2.3
2,782,469	+		OKGIIK_12890	0.61	-0.4
2,782,469	+		OKGIIK_12890	0.61	-0.6
2,782,469	+		OKGIIK_12890	0.61	-0.0
2,782,469	+		OKGIIK_12890	0.61	-0.8
2,782,469	+		OKGIIK_12890	0.61	-1.9
2,782,469	+		OKGIIK_12890	0.61	-0.3
2,782,469	+		OKGIIK_12890	0.61	-0.7
2,782,469	+		OKGIIK_12890	0.61	+0.7
2,782,469	+		OKGIIK_12890	0.61	-2.3
2,782,469	+		OKGIIK_12890	0.61	-0.4
2,782,469	+		OKGIIK_12890	0.61	-2.1
2,782,469	+		OKGIIK_12890	0.61	+0.6
2,782,470	-		OKGIIK_12890	0.62	-1.0
2,782,470	-		OKGIIK_12890	0.62	-0.4
2,782,470	-		OKGIIK_12890	0.62	-1.3
2,782,470	-		OKGIIK_12890	0.62	-1.8
2,782,470	-		OKGIIK_12890	0.62	-1.8
2,782,470	-		OKGIIK_12890	0.62	-0.3
2,782,470	-		OKGIIK_12890	0.62	-0.4
2,782,470	-		OKGIIK_12890	0.62	-1.6
2,782,470	-		OKGIIK_12890	0.62	-0.9
2,782,470	-		OKGIIK_12890	0.62	-0.4
2,782,470	-		OKGIIK_12890	0.62	-1.0
2,782,566	+		OKGIIK_12890	0.74	-0.3
2,782,587	+		OKGIIK_12890	0.76	-0.4
2,782,587	+		OKGIIK_12890	0.76	-1.8
2,782,587	+		OKGIIK_12890	0.76	-0.3
2,782,587	+		OKGIIK_12890	0.76	-1.0
2,782,587	+		OKGIIK_12890	0.76	-0.4
2,782,587	+		OKGIIK_12890	0.76	+0.1
2,782,588	-		OKGIIK_12890	0.77	-2.1
2,782,588	-		OKGIIK_12890	0.77	-0.3
2,782,588	-		OKGIIK_12890	0.77	+0.2