Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12570

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,707,723	+				+0.5
2,707,723	+				+0.3
2,707,723	+				-1.0
2,707,723	+				-1.6
2,707,723	+				-0.8
2,707,723	+				+0.8
2,707,723	+				-1.5
2,707,723	+				+1.0
2,707,723	+				-0.6
2,707,723	+				-1.1
2,707,724	-				+1.3
2,707,724	-				-1.1
2,707,724	-				+0.8
2,707,724	-				-1.3
2,707,724	-				+0.1
2,707,724	-				+1.0
2,707,724	-				+0.3
2,707,724	-				-0.1
2,707,724	-				-0.1
2,707,724	-				-0.1
2,707,724	-				-3.3
2,707,828	+				+0.3
2,707,829	-				+0.5
2,707,829	-				-1.4
2,707,829	-				-1.6
2,707,829	-				+0.2
2,707,896	+				+0.0
2,707,896	+				+0.3
2,707,896	+				-1.4
2,707,896	+				+2.4
2,707,896	+				-1.3
2,707,896	+				+1.0
2,707,896	+				+0.8
2,707,896	+				+1.4
2,707,896	+				-0.1
2,707,896	+				-2.2
2,707,897	-				-0.3
2,707,897	-				-1.2
2,707,897	-				+0.3
2,707,897	-				-0.3
2,707,897	-				-1.1
2,707,897	-				+0.8
2,707,897	-				-0.5
2,707,900	+				+2.3
2,707,900	+				+0.4
2,707,900	+				+1.5
2,707,900	+				+0.3
2,707,900	+				-2.5
2,707,900	+				-0.3
2,707,900	+				+1.1
2,707,900	+				-0.1
2,707,901	-				+1.5
2,707,901	-				+0.8
2,707,901	-				+0.0
2,708,105	-		OKGIIK_12565	0.66	-0.7
2,708,105	-		OKGIIK_12565	0.66	+0.7
2,708,105	-		OKGIIK_12565	0.66	+0.3
2,708,105	-		OKGIIK_12565	0.66	-0.2
2,708,105	-		OKGIIK_12565	0.66	-1.5
2,708,105	-		OKGIIK_12565	0.66	+0.7
2,708,371	-				-0.1
2,708,371	-				-1.9
2,708,631	-		OKGIIK_12570	0.80	-2.0
2,708,631	-		OKGIIK_12570	0.80	-0.1
2,708,747	+				+0.5
2,708,747	+				-0.7
2,708,748	-				-1.3
2,708,748	-				+1.0
2,708,748	-				-0.9
2,708,748	-				-0.9
2,708,748	-				-0.6
2,708,805	+				+0.9
2,709,017	-	rpoE	OKGIIK_12575	0.34	-1.1
2,709,023	-	rpoE	OKGIIK_12575	0.35	-0.1
2,709,061	+	rpoE	OKGIIK_12575	0.42	+0.3
2,709,062	-	rpoE	OKGIIK_12575	0.42	-2.7
2,709,062	-	rpoE	OKGIIK_12575	0.42	+2.3
2,709,062	-	rpoE	OKGIIK_12575	0.42	+1.3
2,709,134	-	rpoE	OKGIIK_12575	0.54	-0.1
2,709,134	-	rpoE	OKGIIK_12575	0.54	-1.0
2,709,134	-	rpoE	OKGIIK_12575	0.54	+1.3
2,709,261	-	rpoE	OKGIIK_12575	0.76	-1.2
2,709,262	+	rpoE	OKGIIK_12575	0.76	-1.2
2,709,262	+	rpoE	OKGIIK_12575	0.76	+0.5
2,709,262	+	rpoE	OKGIIK_12575	0.76	+0.9
2,709,262	+	rpoE	OKGIIK_12575	0.76	-0.5
2,709,262	+	rpoE	OKGIIK_12575	0.76	-0.7
2,709,262	+	rpoE	OKGIIK_12575	0.76	-1.2
2,709,262	+	rpoE	OKGIIK_12575	0.76	-0.2
2,709,262	+	rpoE	OKGIIK_12575	0.76	+0.5
2,709,262	+	rpoE	OKGIIK_12575	0.76	+0.1
2,709,262	+	rpoE	OKGIIK_12575	0.76	+0.5
2,709,262	+	rpoE	OKGIIK_12575	0.76	+1.0
2,709,263	-	rpoE	OKGIIK_12575	0.76	+0.9
2,709,263	-	rpoE	OKGIIK_12575	0.76	-0.1
2,709,263	-	rpoE	OKGIIK_12575	0.76	-0.1
2,709,263	-	rpoE	OKGIIK_12575	0.76	-0.3
2,709,263	-	rpoE	OKGIIK_12575	0.76	-0.7
2,709,263	-	rpoE	OKGIIK_12575	0.76	-0.5
2,709,263	-	rpoE	OKGIIK_12575	0.76	-0.7
2,709,263	-	rpoE	OKGIIK_12575	0.76	-0.1
2,709,266	-	rpoE	OKGIIK_12575	0.77	-0.2
2,709,266	-	rpoE	OKGIIK_12575	0.77	-1.6
2,709,266	-	rpoE	OKGIIK_12575	0.77	-0.7
2,709,266	-	rpoE	OKGIIK_12575	0.77	+0.9
2,709,266	-	rpoE	OKGIIK_12575	0.77	-0.9
2,709,266	-	rpoE	OKGIIK_12575	0.77	+0.2
2,709,266	-	rpoE	OKGIIK_12575	0.77	+0.5
2,709,266	-	rpoE	OKGIIK_12575	0.77	-0.5
2,709,266	-	rpoE	OKGIIK_12575	0.77	+1.0