Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12515

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,693,920	-	dgoD	OKGIIK_12510	0.13	-0.7
2,693,970	+	dgoD	OKGIIK_12510	0.17	-0.7
2,693,970	+	dgoD	OKGIIK_12510	0.17	+0.7
2,693,970	+	dgoD	OKGIIK_12510	0.17	-0.7
2,693,971	-	dgoD	OKGIIK_12510	0.18	-0.3
2,693,971	-	dgoD	OKGIIK_12510	0.18	+1.5
2,693,985	+	dgoD	OKGIIK_12510	0.19	+0.2
2,693,986	-	dgoD	OKGIIK_12510	0.19	-1.8
2,694,118	-	dgoD	OKGIIK_12510	0.30	+0.1
2,694,118	-	dgoD	OKGIIK_12510	0.30	+0.0
2,694,118	-	dgoD	OKGIIK_12510	0.30	-0.8
2,694,225	+	dgoD	OKGIIK_12510	0.40	+1.5
2,694,225	+	dgoD	OKGIIK_12510	0.40	-1.0
2,694,226	-	dgoD	OKGIIK_12510	0.40	-2.5
2,694,226	-	dgoD	OKGIIK_12510	0.40	-2.4
2,694,226	-	dgoD	OKGIIK_12510	0.40	+0.1
2,694,226	-	dgoD	OKGIIK_12510	0.40	+1.9
2,694,278	-	dgoD	OKGIIK_12510	0.44	-0.1
2,694,375	+	dgoD	OKGIIK_12510	0.53	+0.3
2,694,376	-	dgoD	OKGIIK_12510	0.53	-0.7
2,694,376	-	dgoD	OKGIIK_12510	0.53	+0.1
2,694,480	+	dgoD	OKGIIK_12510	0.62	+0.6
2,694,480	+	dgoD	OKGIIK_12510	0.62	+1.5
2,694,481	-	dgoD	OKGIIK_12510	0.62	+0.5
2,694,481	-	dgoD	OKGIIK_12510	0.62	-0.4
2,694,489	+	dgoD	OKGIIK_12510	0.63	+0.3
2,694,506	-	dgoD	OKGIIK_12510	0.64	+1.8
2,694,600	+	dgoD	OKGIIK_12510	0.72	+0.4
2,694,600	+	dgoD	OKGIIK_12510	0.72	-1.3
2,694,601	-	dgoD	OKGIIK_12510	0.72	+0.3
2,694,601	-	dgoD	OKGIIK_12510	0.72	+0.1
2,694,601	-	dgoD	OKGIIK_12510	0.72	-1.1
2,694,601	-	dgoD	OKGIIK_12510	0.72	+0.3
2,694,601	-	dgoD	OKGIIK_12510	0.72	-0.1
2,694,601	-	dgoD	OKGIIK_12510	0.72	-0.1
2,694,601	-	dgoD	OKGIIK_12510	0.72	-1.1
2,694,601	-	dgoD	OKGIIK_12510	0.72	+1.8
2,694,601	-	dgoD	OKGIIK_12510	0.72	+0.5
2,694,717	+	dgoD	OKGIIK_12510	0.83	-0.9
2,694,717	+	dgoD	OKGIIK_12510	0.83	+1.5
2,694,717	+	dgoD	OKGIIK_12510	0.83	-0.2
2,694,717	+	dgoD	OKGIIK_12510	0.83	+0.3
2,694,718	-	dgoD	OKGIIK_12510	0.83	-0.4
2,694,744	+	dgoD	OKGIIK_12510	0.85	+0.1
2,694,744	+	dgoD	OKGIIK_12510	0.85	+1.5
2,694,745	-	dgoD	OKGIIK_12510	0.85	-1.8
2,694,745	-	dgoD	OKGIIK_12510	0.85	-0.3
2,694,745	-	dgoD	OKGIIK_12510	0.85	+0.9
2,694,745	-	dgoD	OKGIIK_12510	0.85	+1.3
2,694,745	-	dgoD	OKGIIK_12510	0.85	-1.6
2,694,763	+	dgoD	OKGIIK_12510	0.87	+0.3
2,694,763	+	dgoD	OKGIIK_12510	0.87	+1.7
2,694,763	+	dgoD	OKGIIK_12510	0.87	-1.3
2,694,764	-	dgoD	OKGIIK_12510	0.87	-0.3
2,694,764	-	dgoD	OKGIIK_12510	0.87	-2.3
2,694,764	-	dgoD	OKGIIK_12510	0.87	+0.7
2,694,764	-	dgoD	OKGIIK_12510	0.87	+1.3
2,694,764	-	dgoD	OKGIIK_12510	0.87	-0.8
2,694,772	-	dgoD	OKGIIK_12510	0.87	+0.1
2,694,834	+				-0.3
2,694,835	-				+1.5
2,694,835	-				+0.9
2,694,835	-				+0.4
2,694,835	-				+0.1
2,694,835	-				-0.7
2,694,938	+				+0.8
2,694,939	-				+1.0
2,694,939	-				-0.7
2,695,221	+		OKGIIK_12515	0.39	+2.1
2,695,221	+		OKGIIK_12515	0.39	+0.3
2,695,221	+		OKGIIK_12515	0.39	-1.1
2,695,221	+		OKGIIK_12515	0.39	-0.2
2,695,221	+		OKGIIK_12515	0.39	-0.1
2,695,221	+		OKGIIK_12515	0.39	+0.7
2,695,221	+		OKGIIK_12515	0.39	-0.5
2,695,221	+		OKGIIK_12515	0.39	-0.4
2,695,222	-		OKGIIK_12515	0.39	+0.3
2,695,222	-		OKGIIK_12515	0.39	-0.5
2,695,222	-		OKGIIK_12515	0.39	-1.1
2,695,222	-		OKGIIK_12515	0.39	-0.3
2,695,222	-		OKGIIK_12515	0.39	-1.0
2,695,222	-		OKGIIK_12515	0.39	+0.7
2,695,222	-		OKGIIK_12515	0.39	+0.5
2,695,222	-		OKGIIK_12515	0.39	+0.1
2,695,222	-		OKGIIK_12515	0.39	+1.9
2,695,222	-		OKGIIK_12515	0.39	-1.2
2,695,292	+		OKGIIK_12515	0.49	+0.9
2,695,292	+		OKGIIK_12515	0.49	-2.2
2,695,292	+		OKGIIK_12515	0.49	+0.7
2,695,292	+		OKGIIK_12515	0.49	-0.5
2,695,293	-		OKGIIK_12515	0.49	-0.1
2,695,293	-		OKGIIK_12515	0.49	+1.0
2,695,293	-		OKGIIK_12515	0.49	+0.5
2,695,293	-		OKGIIK_12515	0.49	-1.3
2,695,293	-		OKGIIK_12515	0.49	+0.4
2,695,293	-		OKGIIK_12515	0.49	-0.5
2,695,293	-		OKGIIK_12515	0.49	-1.2
2,695,293	-		OKGIIK_12515	0.49	+1.6
2,695,400	+		OKGIIK_12515	0.63	+1.0
2,695,400	+		OKGIIK_12515	0.63	+0.8
2,695,400	+		OKGIIK_12515	0.63	+7.5
2,695,400	+		OKGIIK_12515	0.63	+0.0
2,695,400	+		OKGIIK_12515	0.63	+0.3
2,695,400	+		OKGIIK_12515	0.63	-0.3
2,695,400	+		OKGIIK_12515	0.63	+1.3
2,695,401	-		OKGIIK_12515	0.63	+0.1
2,695,401	-		OKGIIK_12515	0.63	-1.5
2,695,401	-		OKGIIK_12515	0.63	-0.4
2,695,401	-		OKGIIK_12515	0.63	-0.3
2,695,401	-		OKGIIK_12515	0.63	+0.9
2,695,401	-		OKGIIK_12515	0.63	-2.1
2,695,646	-				+1.1
2,695,680	+				-0.9
2,695,680	+				+1.0
2,695,681	-				-1.8
2,695,681	-				-0.5
2,695,765	+				-0.3
2,695,765	+				-1.6
2,695,765	+				+0.6
2,695,893	-		OKGIIK_12520	0.23	-1.2
2,695,893	-		OKGIIK_12520	0.23	-0.9
2,695,893	-		OKGIIK_12520	0.23	-0.3
2,695,953	+		OKGIIK_12520	0.30	-0.1
2,695,954	-		OKGIIK_12520	0.30	+0.7
2,695,954	-		OKGIIK_12520	0.30	-1.3
2,695,954	-		OKGIIK_12520	0.30	-0.5
2,696,077	+		OKGIIK_12520	0.44	+0.7
2,696,077	+		OKGIIK_12520	0.44	-0.5
2,696,078	-		OKGIIK_12520	0.44	-1.1
2,696,166	+		OKGIIK_12520	0.54	+0.4
2,696,166	+		OKGIIK_12520	0.54	-0.5
2,696,166	+		OKGIIK_12520	0.54	+0.5
2,696,167	-		OKGIIK_12520	0.54	-2.2
2,696,167	-		OKGIIK_12520	0.54	-1.5
2,696,167	-		OKGIIK_12520	0.54	-0.6
2,696,167	-		OKGIIK_12520	0.54	+1.5
2,696,167	-		OKGIIK_12520	0.54	-1.1
2,696,167	-		OKGIIK_12520	0.54	+0.4
2,696,173	+		OKGIIK_12520	0.54	-1.8
2,696,173	+		OKGIIK_12520	0.54	+0.3
2,696,173	+		OKGIIK_12520	0.54	+0.4
2,696,173	+		OKGIIK_12520	0.54	+0.1
2,696,173	+		OKGIIK_12520	0.54	+0.5
2,696,173	+		OKGIIK_12520	0.54	+2.3
2,696,174	-		OKGIIK_12520	0.54	+0.7
2,696,174	-		OKGIIK_12520	0.54	-0.9
2,696,174	-		OKGIIK_12520	0.54	+0.2
2,696,174	-		OKGIIK_12520	0.54	+2.0
2,696,174	-		OKGIIK_12520	0.54	+1.4
2,696,176	+		OKGIIK_12520	0.55	+0.7
2,696,177	-		OKGIIK_12520	0.55	-1.5
2,696,215	+		OKGIIK_12520	0.59	-0.3
2,696,215	+		OKGIIK_12520	0.59	+0.5
2,696,347	+		OKGIIK_12520	0.74	-0.9
2,696,347	+		OKGIIK_12520	0.74	-0.1
2,696,347	+		OKGIIK_12520	0.74	-0.3
2,696,347	+		OKGIIK_12520	0.74	-0.3
2,696,348	-		OKGIIK_12520	0.74	-1.1
2,696,348	-		OKGIIK_12520	0.74	+0.0
2,696,348	-		OKGIIK_12520	0.74	-2.4
2,696,348	-		OKGIIK_12520	0.74	+0.4
2,696,440	+		OKGIIK_12520	0.84	+1.5
2,696,440	+		OKGIIK_12520	0.84	-1.9
2,696,440	+		OKGIIK_12520	0.84	+0.9
2,696,440	+		OKGIIK_12520	0.84	+0.9
2,696,441	-		OKGIIK_12520	0.84	-0.7
2,696,441	-		OKGIIK_12520	0.84	+0.6
2,696,441	-		OKGIIK_12520	0.84	+1.0
2,696,441	-		OKGIIK_12520	0.84	-0.2
2,696,441	-		OKGIIK_12520	0.84	-0.1
2,696,441	-		OKGIIK_12520	0.84	-0.9
2,696,441	-		OKGIIK_12520	0.84	-0.4
2,696,584	+				+1.7
2,696,584	+				-0.8
2,696,584	+				-1.5
2,696,584	+				-1.2
2,696,584	+				-0.7
2,696,584	+				-1.9
2,696,584	+				-1.1
2,696,585	-				-0.3
2,696,585	-				+1.5
2,696,585	-				-0.2
2,696,585	-				-0.9
2,696,610	+				-0.6
2,696,617	+				-0.6
2,696,635	+				+0.2
2,696,635	+				-1.4
2,696,636	-				+0.8
2,696,636	-				+0.8
2,696,636	-				-0.9