Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12420

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,674,571	+	baeS	OKGIIK_12410	0.83	+0.5
2,674,571	+	baeS	OKGIIK_12410	0.83	-0.7
2,674,572	-	baeS	OKGIIK_12410	0.83	+0.3
2,674,572	-	baeS	OKGIIK_12410	0.83	-0.2
2,674,572	-	baeS	OKGIIK_12410	0.83	+0.3
2,674,572	-	baeS	OKGIIK_12410	0.83	-1.0
2,674,577	+	baeS	OKGIIK_12410	0.84	+1.1
2,674,577	+	baeS	OKGIIK_12410	0.84	-0.7
2,674,577	+	baeS	OKGIIK_12410	0.84	-0.6
2,674,578	-	baeS	OKGIIK_12410	0.84	+0.6
2,674,578	-	baeS	OKGIIK_12410	0.84	-1.3
2,674,578	-	baeS	OKGIIK_12410	0.84	+0.5
2,674,578	-	baeS	OKGIIK_12410	0.84	-0.0
2,674,668	-	baeS	OKGIIK_12410	0.88	-1.3
2,674,706	+				+1.0
2,674,706	+				-0.7
2,674,706	+				+0.1
2,674,706	+				-0.8
2,674,706	+				-0.0
2,674,707	-				+0.3
2,674,707	-				+0.4
2,674,707	-				-0.3
2,674,707	-				+0.3
2,674,707	-				+0.5
2,674,835	+				+0.0
2,674,835	+				-1.0
2,674,835	+				+2.0
2,674,835	+				-1.2
2,674,835	+				+0.5
2,674,835	+				+0.9
2,674,835	+				-0.3
2,674,835	+				+0.8
2,674,836	-				-1.2
2,675,111	+		OKGIIK_12415	0.33	+0.7
2,675,111	+		OKGIIK_12415	0.33	-0.4
2,675,111	+		OKGIIK_12415	0.33	+0.3
2,675,112	-		OKGIIK_12415	0.34	+0.1
2,675,112	-		OKGIIK_12415	0.34	-1.7
2,675,112	-		OKGIIK_12415	0.34	-0.0
2,675,189	+		OKGIIK_12415	0.47	+0.3
2,675,190	-		OKGIIK_12415	0.47	-1.4
2,675,294	+		OKGIIK_12415	0.65	-0.6
2,675,294	+		OKGIIK_12415	0.65	-0.0
2,675,294	+		OKGIIK_12415	0.65	+0.1
2,675,294	+		OKGIIK_12415	0.65	-0.1
2,675,294	+		OKGIIK_12415	0.65	-0.9
2,675,294	+		OKGIIK_12415	0.65	-0.7
2,675,295	-		OKGIIK_12415	0.65	-0.3
2,675,295	-		OKGIIK_12415	0.65	-0.3
2,675,295	-		OKGIIK_12415	0.65	+0.9
2,675,327	+		OKGIIK_12415	0.71	-0.9
2,675,327	+		OKGIIK_12415	0.71	-1.6
2,675,327	+		OKGIIK_12415	0.71	-1.7
2,675,327	+		OKGIIK_12415	0.71	+0.6
2,675,327	+		OKGIIK_12415	0.71	-0.4
2,675,327	+		OKGIIK_12415	0.71	+0.1
2,675,328	-		OKGIIK_12415	0.71	-0.2
2,675,328	-		OKGIIK_12415	0.71	+1.3
2,675,328	-		OKGIIK_12415	0.71	+0.7
2,675,328	-		OKGIIK_12415	0.71	-0.3
2,675,328	-		OKGIIK_12415	0.71	-1.8
2,675,328	-		OKGIIK_12415	0.71	-1.6
2,675,328	-		OKGIIK_12415	0.71	+0.3
2,675,328	-		OKGIIK_12415	0.71	+0.4
2,675,328	-		OKGIIK_12415	0.71	-0.2
2,675,328	-		OKGIIK_12415	0.71	+1.1
2,675,328	-		OKGIIK_12415	0.71	-0.0
2,675,328	-		OKGIIK_12415	0.71	+1.1
2,675,328	-		OKGIIK_12415	0.71	-0.5
2,675,328	-		OKGIIK_12415	0.71	-0.3
2,675,328	-		OKGIIK_12415	0.71	-1.6
2,675,328	-		OKGIIK_12415	0.71	+0.3
2,675,328	-		OKGIIK_12415	0.71	-2.5
2,675,328	-		OKGIIK_12415	0.71	-0.5
2,675,328	-		OKGIIK_12415	0.71	-1.5
2,675,328	-		OKGIIK_12415	0.71	-0.1
2,675,328	-		OKGIIK_12415	0.71	+1.6
2,675,614	-	pdsR	OKGIIK_12420	0.18	+0.3
2,675,614	-	pdsR	OKGIIK_12420	0.18	+1.3
2,675,878	+	pdsR	OKGIIK_12420	0.56	+0.5
2,675,879	-	pdsR	OKGIIK_12420	0.56	-0.4
2,676,088	+	pdsR	OKGIIK_12420	0.86	+1.0
2,676,130	+				-0.4
2,676,130	+				-0.1
2,676,130	+				-1.5
2,676,130	+				+0.1
2,676,130	+				-0.5
2,676,130	+				+0.0
2,676,130	+				-0.7
2,676,130	+				+0.1
2,676,130	+				-1.4
2,676,130	+				+1.0
2,676,130	+				+0.5
2,676,131	-				-1.3
2,676,131	-				+0.9
2,676,131	-				-0.9
2,676,131	-				-0.1
2,676,131	-				+1.2
2,676,131	-				+0.3
2,676,131	-				-1.3
2,676,131	-				+1.0
2,676,131	-				-0.7
2,676,131	-				-0.1
2,676,131	-				-1.2
2,676,218	-				+0.4
2,676,218	-				-2.1
2,676,218	-				-0.1
2,676,329	+				-1.5
2,676,330	-				+1.3
2,676,330	-				-1.6
2,676,330	-				-1.3
2,676,723	+				-0.7
2,676,723	+				-0.3
2,676,723	+				-0.3
2,676,723	+				-2.3
2,676,723	+				-1.5
2,676,723	+				+5.9
2,676,724	-				+1.3
2,676,724	-				+1.5
2,676,724	-				+0.8
2,676,761	+				+0.3
2,676,761	+				-2.4
2,676,761	+				-0.3
2,676,761	+				-0.9
2,676,761	+				-1.4
2,676,761	+				+0.5
2,676,761	+				-1.1
2,676,761	+				-0.7
2,676,761	+				-0.3
2,676,761	+				+1.9
2,676,761	+				-1.1
2,676,761	+				-1.9
2,676,761	+				+1.9
2,676,762	-				+1.4
2,676,762	-				-0.7
2,676,762	-				-0.7
2,676,762	-				-1.2
2,676,762	-				-0.7
2,676,762	-				-0.9
2,676,762	-				-1.2
2,676,762	-				-1.6
2,676,762	-				-0.4
2,676,762	-				-2.3
2,676,762	-				+0.1
2,676,762	-				+0.3
2,676,762	-				-2.8
2,676,762	-				-1.1
2,676,764	+				-0.5
2,676,764	+				+0.9
2,676,764	+				-2.5
2,676,764	+				-1.2
2,676,764	+				-0.2
2,676,764	+				+2.1
2,676,764	+				+0.7
2,676,765	-				+2.5
2,676,765	-				-2.7
2,676,765	-				-0.1
2,676,775	-				+0.3
2,676,775	-				-0.7
2,676,826	+				+0.3
2,676,826	+				-2.1
2,676,826	+				+0.3
2,676,826	+				-0.5
2,676,827	-				+0.3
2,676,827	-				-0.1
2,676,827	-				-0.1
2,676,827	-				-0.1
2,676,920	+				+0.5
2,676,920	+				-0.4
2,676,920	+				-0.3
2,676,920	+				-1.1
2,676,920	+				-1.2
2,676,920	+				+1.0
2,676,921	-				-1.1
2,676,921	-				+0.7
2,676,960	+				+0.1
2,676,995	+				-1.6
2,676,996	-				+0.2
2,677,030	+				+0.2