Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12375

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,663,141	+		OKGIIK_12370	0.70	-1.0
2,663,142	-		OKGIIK_12370	0.70	+0.2
2,663,211	-		OKGIIK_12370	0.72	-0.7
2,663,211	-		OKGIIK_12370	0.72	-0.4
2,663,330	+		OKGIIK_12370	0.76	-0.0
2,663,330	+		OKGIIK_12370	0.76	-0.5
2,663,330	+		OKGIIK_12370	0.76	-0.3
2,663,330	+		OKGIIK_12370	0.76	+0.3
2,663,330	+		OKGIIK_12370	0.76	-1.9
2,663,330	+		OKGIIK_12370	0.76	+0.5
2,663,330	+		OKGIIK_12370	0.76	-1.4
2,663,330	+		OKGIIK_12370	0.76	+0.3
2,663,331	-		OKGIIK_12370	0.76	-0.6
2,663,331	-		OKGIIK_12370	0.76	-1.6
2,663,331	-		OKGIIK_12370	0.76	-0.0
2,663,331	-		OKGIIK_12370	0.76	+0.7
2,663,331	-		OKGIIK_12370	0.76	+0.3
2,663,331	-		OKGIIK_12370	0.76	+0.1
2,663,331	-		OKGIIK_12370	0.76	+0.9
2,663,331	-		OKGIIK_12370	0.76	-1.8
2,663,331	-		OKGIIK_12370	0.76	-0.4
2,663,349	-		OKGIIK_12370	0.77	-0.9
2,663,349	-		OKGIIK_12370	0.77	-1.0
2,663,349	-		OKGIIK_12370	0.77	+0.3
2,663,349	-		OKGIIK_12370	0.77	+0.8
2,663,349	-		OKGIIK_12370	0.77	+1.3
2,663,387	+		OKGIIK_12370	0.78	-0.0
2,663,388	-		OKGIIK_12370	0.78	-1.0
2,663,388	-		OKGIIK_12370	0.78	-0.5
2,663,450	+		OKGIIK_12370	0.80	-1.4
2,663,450	+		OKGIIK_12370	0.80	-0.2
2,663,450	+		OKGIIK_12370	0.80	-0.0
2,663,451	-		OKGIIK_12370	0.80	+0.2
2,663,451	-		OKGIIK_12370	0.80	+0.1
2,663,451	-		OKGIIK_12370	0.80	-1.0
2,663,571	-		OKGIIK_12370	0.84	-0.8
2,663,717	+		OKGIIK_12370	0.89	-0.7
2,663,717	+		OKGIIK_12370	0.89	-0.7
2,663,718	-		OKGIIK_12370	0.89	-2.0
2,663,718	-		OKGIIK_12370	0.89	+0.3
2,663,718	-		OKGIIK_12370	0.89	-0.7
2,663,718	-		OKGIIK_12370	0.89	+1.3
2,663,718	-		OKGIIK_12370	0.89	-0.0
2,663,726	+		OKGIIK_12370	0.90	+1.9
2,663,726	+		OKGIIK_12370	0.90	-2.0
2,663,726	+		OKGIIK_12370	0.90	-2.8
2,663,726	+		OKGIIK_12370	0.90	+1.0
2,663,726	+		OKGIIK_12370	0.90	-0.1
2,663,726	+		OKGIIK_12370	0.90	-0.3
2,663,727	-		OKGIIK_12370	0.90	-0.9
2,663,727	-		OKGIIK_12370	0.90	+1.0
2,663,727	-		OKGIIK_12370	0.90	+0.3
2,663,727	-		OKGIIK_12370	0.90	+1.6
2,663,727	-		OKGIIK_12370	0.90	-0.5
2,663,729	+		OKGIIK_12370	0.90	+0.3
2,663,729	+		OKGIIK_12370	0.90	-2.0
2,663,729	+		OKGIIK_12370	0.90	-3.0
2,663,729	+		OKGIIK_12370	0.90	+0.3
2,663,729	+		OKGIIK_12370	0.90	-0.7
2,663,729	+		OKGIIK_12370	0.90	-0.0
2,663,729	+		OKGIIK_12370	0.90	-1.4
2,663,729	+		OKGIIK_12370	0.90	-1.1
2,663,729	+		OKGIIK_12370	0.90	+0.3
2,663,729	+		OKGIIK_12370	0.90	-2.5
2,663,729	+		OKGIIK_12370	0.90	-0.3
2,663,729	+		OKGIIK_12370	0.90	-0.4
2,663,730	-		OKGIIK_12370	0.90	+0.1
2,663,730	-		OKGIIK_12370	0.90	-0.2
2,663,730	-		OKGIIK_12370	0.90	-0.3
2,663,730	-		OKGIIK_12370	0.90	+1.7
2,663,801	+				-0.4
2,663,801	+				+0.3
2,663,801	+				-0.7
2,663,801	+				+0.1
2,663,801	+				-0.3
2,663,801	+				-0.2
2,663,802	-				+0.7
2,663,846	+				-1.0
2,663,846	+				+0.1
2,663,847	-				-1.3
2,663,847	-				+0.6
2,663,847	-				-0.4
2,663,847	-				-0.7
2,663,894	+				-1.0
2,663,894	+				-0.0
2,663,894	+				-0.4
2,664,032	-				+1.3
2,664,032	-				-2.2
2,664,251	+				-0.7
2,664,251	+				-0.3
2,664,251	+				+2.9
2,664,252	-				-0.5
2,664,252	-				-1.4
2,664,252	-				+2.3
2,664,926	+	lysA	OKGIIK_12375	0.61	-1.0
2,664,926	+	lysA	OKGIIK_12375	0.61	+0.3
2,664,926	+	lysA	OKGIIK_12375	0.61	+2.3
2,664,927	-	lysA	OKGIIK_12375	0.61	+0.0
2,665,109	+	lysA	OKGIIK_12375	0.75	+2.0
2,665,109	+	lysA	OKGIIK_12375	0.75	+0.6
2,665,127	-	lysA	OKGIIK_12375	0.77	+1.3
2,665,127	-	lysA	OKGIIK_12375	0.77	-0.7
2,665,166	+	lysA	OKGIIK_12375	0.80	-0.2
2,665,166	+	lysA	OKGIIK_12375	0.80	-1.0
2,665,166	+	lysA	OKGIIK_12375	0.80	-1.2
2,665,167	-	lysA	OKGIIK_12375	0.80	-0.7
2,665,167	-	lysA	OKGIIK_12375	0.80	-0.6
2,665,167	-	lysA	OKGIIK_12375	0.80	-0.7
2,665,167	-	lysA	OKGIIK_12375	0.80	-0.8
2,665,167	-	lysA	OKGIIK_12375	0.80	-0.5
2,665,167	-	lysA	OKGIIK_12375	0.80	-1.5
2,665,167	-	lysA	OKGIIK_12375	0.80	+0.9
2,665,167	-	lysA	OKGIIK_12375	0.80	-0.9
2,665,201	+	lysA	OKGIIK_12375	0.82	+1.5
2,665,201	+	lysA	OKGIIK_12375	0.82	+0.0
2,665,201	+	lysA	OKGIIK_12375	0.82	+1.4
2,665,201	+	lysA	OKGIIK_12375	0.82	+0.3
2,665,275	-	lysA	OKGIIK_12375	0.88	+0.3
2,665,275	-	lysA	OKGIIK_12375	0.88	-1.2
2,665,298	+	lysA	OKGIIK_12375	0.90	-1.7
2,665,298	+	lysA	OKGIIK_12375	0.90	+0.7
2,665,298	+	lysA	OKGIIK_12375	0.90	+0.4
2,665,298	+	lysA	OKGIIK_12375	0.90	+1.1
2,665,299	-	lysA	OKGIIK_12375	0.90	+1.6
2,665,299	-	lysA	OKGIIK_12375	0.90	+0.5
2,665,299	-	lysA	OKGIIK_12375	0.90	-0.2
2,665,299	-	lysA	OKGIIK_12375	0.90	+0.3
2,665,299	-	lysA	OKGIIK_12375	0.90	+0.1
2,665,299	-	lysA	OKGIIK_12375	0.90	-0.2
2,665,299	-	lysA	OKGIIK_12375	0.90	+0.1
2,665,299	-	lysA	OKGIIK_12375	0.90	+2.3
2,665,343	+				+0.3
2,665,343	+				+0.4
2,665,343	+				-0.0
2,665,343	+				+0.8
2,665,344	-				-0.8
2,665,344	-				-0.3
2,665,344	-				+0.0
2,665,344	-				-1.5
2,665,344	-				-1.6
2,665,344	-				+0.5
2,665,344	-				-0.3
2,665,344	-				-0.5
2,665,347	-				-0.8
2,665,347	-				-0.9
2,665,347	-				-0.2
2,665,347	-				+0.3
2,665,347	-				-0.0
2,665,356	+				+0.5
2,665,356	+				-0.0
2,665,356	+				-0.0
2,665,357	-				+0.5
2,665,543	+				-1.0
2,665,543	+				-0.7
2,665,543	+				-1.5
2,665,543	+				-1.2
2,665,543	+				+1.5
2,665,543	+				+0.3
2,665,544	-				-0.8
2,665,544	-				+0.4
2,665,544	-				-0.2
2,665,712	-		OKGIIK_12380	0.24	+0.1
2,665,741	+		OKGIIK_12380	0.26	-2.0
2,665,741	+		OKGIIK_12380	0.26	-0.5
2,665,741	+		OKGIIK_12380	0.26	+0.3
2,665,741	+		OKGIIK_12380	0.26	-1.4
2,665,741	+		OKGIIK_12380	0.26	-0.5
2,665,741	+		OKGIIK_12380	0.26	+0.3
2,665,741	+		OKGIIK_12380	0.26	+0.5
2,665,742	-		OKGIIK_12380	0.26	+0.7
2,665,742	-		OKGIIK_12380	0.26	-0.7
2,665,742	-		OKGIIK_12380	0.26	+0.2
2,665,742	-		OKGIIK_12380	0.26	-2.1
2,665,742	-		OKGIIK_12380	0.26	-0.5
2,665,742	-		OKGIIK_12380	0.26	+0.7
2,665,742	-		OKGIIK_12380	0.26	+0.1
2,665,742	-		OKGIIK_12380	0.26	+0.1
2,665,742	-		OKGIIK_12380	0.26	-1.0
2,666,082	-		OKGIIK_12380	0.54	+0.6
2,666,100	-		OKGIIK_12380	0.56	+2.3
2,666,100	-		OKGIIK_12380	0.56	-0.0
2,666,224	+		OKGIIK_12380	0.66	-0.4
2,666,224	+		OKGIIK_12380	0.66	-0.0
2,666,225	-		OKGIIK_12380	0.66	+1.1
2,666,225	-		OKGIIK_12380	0.66	+0.1
2,666,225	-		OKGIIK_12380	0.66	+0.6
2,666,314	+		OKGIIK_12380	0.74	-0.2
2,666,314	+		OKGIIK_12380	0.74	+0.3
2,666,314	+		OKGIIK_12380	0.74	-0.0
2,666,314	+		OKGIIK_12380	0.74	+0.9
2,666,315	-		OKGIIK_12380	0.74	-0.8
2,666,315	-		OKGIIK_12380	0.74	-0.4
2,666,315	-		OKGIIK_12380	0.74	+0.4
2,666,380	+		OKGIIK_12380	0.79	+1.0
2,666,380	+		OKGIIK_12380	0.79	+1.0
2,666,404	+		OKGIIK_12380	0.81	+0.7
2,666,404	+		OKGIIK_12380	0.81	-2.0
2,666,404	+		OKGIIK_12380	0.81	-0.3
2,666,405	-		OKGIIK_12380	0.81	-0.0
2,666,405	-		OKGIIK_12380	0.81	-0.4
2,666,405	-		OKGIIK_12380	0.81	-1.0