Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12280

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,637,975	-				+0.4
2,638,072	+	serB	OKGIIK_12275	0.17	-0.8
2,638,072	+	serB	OKGIIK_12275	0.17	-1.1
2,638,072	+	serB	OKGIIK_12275	0.17	+0.6
2,638,072	+	serB	OKGIIK_12275	0.17	-2.7
2,638,072	+	serB	OKGIIK_12275	0.17	-0.4
2,638,072	+	serB	OKGIIK_12275	0.17	-1.0
2,638,072	+	serB	OKGIIK_12275	0.17	-3.5
2,638,072	+	serB	OKGIIK_12275	0.17	-0.8
2,638,072	+	serB	OKGIIK_12275	0.17	-0.4
2,638,072	+	serB	OKGIIK_12275	0.17	-0.0
2,638,072	+	serB	OKGIIK_12275	0.17	-0.8
2,638,072	+	serB	OKGIIK_12275	0.17	-2.1
2,638,073	-	serB	OKGIIK_12275	0.18	-1.6
2,638,073	-	serB	OKGIIK_12275	0.18	-2.2
2,638,073	-	serB	OKGIIK_12275	0.18	-1.6
2,638,073	-	serB	OKGIIK_12275	0.18	-0.6
2,638,073	-	serB	OKGIIK_12275	0.18	-1.6
2,638,073	-	serB	OKGIIK_12275	0.18	-1.8
2,638,073	-	serB	OKGIIK_12275	0.18	+1.1
2,638,087	+	serB	OKGIIK_12275	0.20	-1.0
2,638,088	-	serB	OKGIIK_12275	0.20	-0.4
2,638,432	+	serB	OKGIIK_12275	0.71	-1.2
2,638,432	+	serB	OKGIIK_12275	0.71	-1.0
2,638,432	+	serB	OKGIIK_12275	0.71	-0.4
2,638,432	+	serB	OKGIIK_12275	0.71	-0.4
2,638,432	+	serB	OKGIIK_12275	0.71	+0.4
2,638,432	+	serB	OKGIIK_12275	0.71	-2.1
2,638,432	+	serB	OKGIIK_12275	0.71	-0.8
2,638,432	+	serB	OKGIIK_12275	0.71	-2.4
2,638,432	+	serB	OKGIIK_12275	0.71	-0.0
2,638,432	+	serB	OKGIIK_12275	0.71	-1.8
2,638,433	-	serB	OKGIIK_12275	0.71	-0.6
2,638,433	-	serB	OKGIIK_12275	0.71	-1.6
2,638,433	-	serB	OKGIIK_12275	0.71	-0.8
2,638,433	-	serB	OKGIIK_12275	0.71	-1.4
2,638,433	-	serB	OKGIIK_12275	0.71	-0.2
2,638,433	-	serB	OKGIIK_12275	0.71	-2.7
2,638,433	-	serB	OKGIIK_12275	0.71	-0.8
2,638,433	-	serB	OKGIIK_12275	0.71	-0.8
2,638,433	-	serB	OKGIIK_12275	0.71	-2.7
2,638,433	-	serB	OKGIIK_12275	0.71	-0.1
2,638,433	-	serB	OKGIIK_12275	0.71	-1.3
2,638,433	-	serB	OKGIIK_12275	0.71	+0.0
2,638,433	-	serB	OKGIIK_12275	0.71	+0.1
2,638,433	-	serB	OKGIIK_12275	0.71	-1.9
2,638,433	-	serB	OKGIIK_12275	0.71	+0.6
2,638,433	-	serB	OKGIIK_12275	0.71	-0.9
2,638,543	+	serB	OKGIIK_12275	0.87	-1.8
2,638,543	+	serB	OKGIIK_12275	0.87	+0.2
2,638,543	+	serB	OKGIIK_12275	0.87	-1.6
2,638,543	+	serB	OKGIIK_12275	0.87	+0.6
2,638,543	+	serB	OKGIIK_12275	0.87	-0.8
2,638,543	+	serB	OKGIIK_12275	0.87	-2.0
2,638,543	+	serB	OKGIIK_12275	0.87	-2.2
2,638,543	+	serB	OKGIIK_12275	0.87	-1.2
2,638,543	+	serB	OKGIIK_12275	0.87	-1.8
2,638,544	-	serB	OKGIIK_12275	0.87	-0.6
2,638,544	-	serB	OKGIIK_12275	0.87	-1.6
2,638,544	-	serB	OKGIIK_12275	0.87	-0.4
2,638,544	-	serB	OKGIIK_12275	0.87	-1.2
2,638,544	-	serB	OKGIIK_12275	0.87	-0.9
2,638,580	-				+0.6
2,638,636	+				-1.0
2,638,734	+	trpC	OKGIIK_12280	0.13	-2.0
2,638,734	+	trpC	OKGIIK_12280	0.13	-0.4
2,638,734	+	trpC	OKGIIK_12280	0.13	-1.8
2,638,734	+	trpC	OKGIIK_12280	0.13	-1.9
2,638,735	-	trpC	OKGIIK_12280	0.13	+0.8
2,638,735	-	trpC	OKGIIK_12280	0.13	-2.0
2,638,788	+	trpC	OKGIIK_12280	0.19	-0.4
2,638,788	+	trpC	OKGIIK_12280	0.19	-0.8
2,638,789	-	trpC	OKGIIK_12280	0.19	-2.9
2,638,789	-	trpC	OKGIIK_12280	0.19	-1.0
2,638,789	-	trpC	OKGIIK_12280	0.19	-0.4
2,638,789	-	trpC	OKGIIK_12280	0.19	-1.3
2,638,789	-	trpC	OKGIIK_12280	0.19	-1.6
2,639,181	+	trpC	OKGIIK_12280	0.69	-2.7
2,639,181	+	trpC	OKGIIK_12280	0.69	-0.4
2,639,181	+	trpC	OKGIIK_12280	0.69	-0.4
2,639,182	-	trpC	OKGIIK_12280	0.69	-0.4
2,639,182	-	trpC	OKGIIK_12280	0.69	-0.4
2,639,182	-	trpC	OKGIIK_12280	0.69	-0.8
2,639,182	-	trpC	OKGIIK_12280	0.69	-0.8
2,639,182	-	trpC	OKGIIK_12280	0.69	-2.2
2,639,182	-	trpC	OKGIIK_12280	0.69	+1.1
2,639,447	+				-0.4
2,639,447	+				-0.8
2,639,448	-				+1.1
2,639,448	-				-1.7
2,639,448	-				+0.1
2,639,448	-				+0.4
2,639,448	-				-0.6
2,639,448	-				-2.8
2,639,448	-				-1.8
2,639,448	-				+0.6
2,639,477	-				-1.0
2,639,527	+				+0.6
2,639,527	+				-1.6
2,639,527	+				-1.0
2,639,527	+				-0.6
2,639,527	+				-0.7
2,639,527	+				-2.0
2,639,527	+				+0.1
2,639,527	+				-0.0
2,639,527	+				-1.3
2,639,527	+				-2.5
2,639,527	+				-0.2
2,639,528	-				+0.6
2,639,528	-				-1.6
2,639,528	-				+0.1
2,639,528	-				-0.7
2,639,528	-				-0.4
2,639,528	-				-0.8
2,639,528	-				+0.6
2,639,656	+	trpD	OKGIIK_12285	0.12	-2.6
2,639,656	+	trpD	OKGIIK_12285	0.12	-1.6
2,639,656	+	trpD	OKGIIK_12285	0.12	-0.8
2,639,657	-	trpD	OKGIIK_12285	0.12	-0.0
2,639,657	-	trpD	OKGIIK_12285	0.12	-0.8
2,639,657	-	trpD	OKGIIK_12285	0.12	-0.8
2,639,698	-	trpD	OKGIIK_12285	0.16	-0.8
2,639,815	+	trpD	OKGIIK_12285	0.27	-1.3
2,639,815	+	trpD	OKGIIK_12285	0.27	-0.8
2,639,815	+	trpD	OKGIIK_12285	0.27	-0.2
2,639,816	-	trpD	OKGIIK_12285	0.27	+0.6
2,639,816	-	trpD	OKGIIK_12285	0.27	-1.0
2,639,816	-	trpD	OKGIIK_12285	0.27	-1.6
2,640,049	+	trpD	OKGIIK_12285	0.49	-0.4