Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12000

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,584,154	+		OKGIIK_11995	0.49	+1.6
2,584,154	+		OKGIIK_11995	0.49	+1.8
2,584,155	-		OKGIIK_11995	0.50	+2.0
2,584,155	-		OKGIIK_11995	0.50	+1.9
2,584,155	-		OKGIIK_11995	0.50	+1.9
2,584,155	-		OKGIIK_11995	0.50	+1.5
2,584,235	+		OKGIIK_11995	0.56	+1.0
2,584,235	+		OKGIIK_11995	0.56	+1.8
2,584,235	+		OKGIIK_11995	0.56	+1.5
2,584,236	-		OKGIIK_11995	0.56	+1.1
2,584,236	-		OKGIIK_11995	0.56	+0.3
2,584,236	-		OKGIIK_11995	0.56	+2.3
2,584,236	-		OKGIIK_11995	0.56	+1.2
2,584,236	-		OKGIIK_11995	0.56	-1.0
2,584,244	+		OKGIIK_11995	0.57	+2.5
2,584,244	+		OKGIIK_11995	0.57	-0.0
2,584,245	-		OKGIIK_11995	0.57	+2.0
2,584,245	-		OKGIIK_11995	0.57	+0.7
2,584,245	-		OKGIIK_11995	0.57	+1.4
2,584,245	-		OKGIIK_11995	0.57	+1.1
2,584,245	-		OKGIIK_11995	0.57	+0.2
2,584,287	-		OKGIIK_11995	0.60	+0.6
2,584,777	+				-0.3
2,584,777	+				+0.6
2,584,778	-				+1.5
2,584,778	-				+0.5
2,584,778	-				-0.4
2,584,830	+				-0.7
2,584,830	+				-0.0
2,584,830	+				+0.5
2,584,830	+				+0.4
2,584,831	-				+0.7
2,584,831	-				-0.2
2,584,833	+				+0.5
2,584,833	+				+0.4
2,584,833	+				+1.0
2,584,833	+				+1.1
2,584,833	+				+0.2
2,584,833	+				-0.6
2,584,833	+				+1.3
2,584,833	+				+0.3
2,584,833	+				-1.0
2,584,833	+				-1.8
2,584,833	+				+0.2
2,584,833	+				-0.8
2,584,833	+				-0.2
2,584,833	+				+1.2
2,584,833	+				-1.4
2,584,833	+				+0.2
2,584,833	+				-1.3
2,584,833	+				+0.3
2,584,833	+				-1.0
2,584,833	+				+0.3
2,584,833	+				-0.5
2,584,833	+				-1.3
2,584,833	+				+0.3
2,584,833	+				-0.3
2,584,833	+				-1.1
2,584,833	+				-0.1
2,584,833	+				+0.3
2,584,833	+				+0.4
2,584,833	+				+0.3
2,584,833	+				-0.8
2,584,833	+				-0.0
2,584,833	+				-1.7
2,584,833	+				-0.2
2,584,833	+				-0.7
2,584,833	+				+2.3
2,584,833	+				+1.0
2,584,833	+				-1.9
2,584,833	+				+0.5
2,584,834	-				+0.3
2,584,834	-				-0.5
2,584,834	-				-0.7
2,584,834	-				+0.7
2,584,834	-				-1.2
2,584,834	-				-1.1
2,584,834	-				-0.4
2,584,834	-				+0.6
2,584,834	-				+0.3
2,584,834	-				-1.8
2,584,834	-				-1.8
2,584,834	-				-0.5
2,584,834	-				+0.3
2,584,834	-				+0.7
2,584,834	-				-1.1
2,584,834	-				+0.3
2,584,834	-				+0.3
2,584,834	-				+1.0
2,584,834	-				-1.5
2,585,074	+	marR	OKGIIK_12000	0.38	+1.3
2,585,074	+	marR	OKGIIK_12000	0.38	+0.6
2,585,074	+	marR	OKGIIK_12000	0.38	+1.3
2,585,074	+	marR	OKGIIK_12000	0.38	-0.0
2,585,074	+	marR	OKGIIK_12000	0.38	+1.0
2,585,074	+	marR	OKGIIK_12000	0.38	-0.6
2,585,074	+	marR	OKGIIK_12000	0.38	+0.3
2,585,074	+	marR	OKGIIK_12000	0.38	+1.3
2,585,074	+	marR	OKGIIK_12000	0.38	+1.2
2,585,074	+	marR	OKGIIK_12000	0.38	+0.2
2,585,075	-	marR	OKGIIK_12000	0.39	+0.3
2,585,075	-	marR	OKGIIK_12000	0.39	-1.1
2,585,075	-	marR	OKGIIK_12000	0.39	+1.3
2,585,075	-	marR	OKGIIK_12000	0.39	+0.3
2,585,075	-	marR	OKGIIK_12000	0.39	+0.5
2,585,075	-	marR	OKGIIK_12000	0.39	+2.1
2,585,075	-	marR	OKGIIK_12000	0.39	+0.5
2,585,075	-	marR	OKGIIK_12000	0.39	+0.5
2,585,075	-	marR	OKGIIK_12000	0.39	+0.5
2,585,075	-	marR	OKGIIK_12000	0.39	+1.0
2,585,221	+	marR	OKGIIK_12000	0.71	-0.5
2,585,221	+	marR	OKGIIK_12000	0.71	-0.6
2,585,221	+	marR	OKGIIK_12000	0.71	+0.4
2,585,221	+	marR	OKGIIK_12000	0.71	-0.3
2,585,221	+	marR	OKGIIK_12000	0.71	+1.2
2,585,221	+	marR	OKGIIK_12000	0.71	-0.6
2,585,221	+	marR	OKGIIK_12000	0.71	+0.2
2,585,221	+	marR	OKGIIK_12000	0.71	-0.3
2,585,221	+	marR	OKGIIK_12000	0.71	-0.0
2,585,222	-	marR	OKGIIK_12000	0.71	+0.6
2,585,222	-	marR	OKGIIK_12000	0.71	+1.9
2,585,222	-	marR	OKGIIK_12000	0.71	-0.9
2,585,222	-	marR	OKGIIK_12000	0.71	-0.0
2,585,222	-	marR	OKGIIK_12000	0.71	-0.2
2,585,222	-	marR	OKGIIK_12000	0.71	+1.0
2,585,222	-	marR	OKGIIK_12000	0.71	+0.7
2,585,222	-	marR	OKGIIK_12000	0.71	+1.1
2,585,222	-	marR	OKGIIK_12000	0.71	+1.0
2,585,324	-				+1.1
2,585,398	+				-0.7
2,585,398	+				+0.7
2,585,398	+				-0.5
2,585,398	+				+2.5
2,585,398	+				+1.3
2,585,398	+				+0.7
2,585,398	+				+0.2
2,585,399	-				+0.2
2,585,399	-				-1.2
2,585,399	-				-0.4
2,585,399	-				-0.3
2,585,399	-				+0.5
2,585,399	-				-0.5
2,585,399	-				+1.0
2,585,399	-				+1.3
2,585,399	-				-0.6
2,585,802	+		OKGIIK_12005	0.72	+1.8
2,585,943	+				+0.1
2,586,043	+				-1.3
2,586,043	+				+1.0
2,586,169	+				-1.3
2,586,170	-				-0.6
2,586,170	-				-0.3
2,586,291	+		OKGIIK_12010	0.16	-1.0
2,586,292	-		OKGIIK_12010	0.16	+1.1
2,586,292	-		OKGIIK_12010	0.16	-1.1
2,586,292	-		OKGIIK_12010	0.16	-1.0
2,586,292	-		OKGIIK_12010	0.16	+1.0
2,586,292	-		OKGIIK_12010	0.16	-1.0
2,586,292	-		OKGIIK_12010	0.16	+0.7
2,586,292	-		OKGIIK_12010	0.16	-0.3
2,586,292	-		OKGIIK_12010	0.16	+1.3
2,586,292	-		OKGIIK_12010	0.16	-0.7
2,586,292	-		OKGIIK_12010	0.16	-0.2
2,586,292	-		OKGIIK_12010	0.16	+1.6
2,586,292	-		OKGIIK_12010	0.16	-0.1
2,586,292	-		OKGIIK_12010	0.16	+1.0