Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11950

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,572,620	+		OKGIIK_11945	0.46	-2.2
2,572,620	+		OKGIIK_11945	0.46	-1.2
2,572,620	+		OKGIIK_11945	0.46	-2.4
2,572,620	+		OKGIIK_11945	0.46	-0.2
2,572,620	+		OKGIIK_11945	0.46	+0.9
2,572,620	+		OKGIIK_11945	0.46	+0.6
2,572,620	+		OKGIIK_11945	0.46	-1.6
2,572,620	+		OKGIIK_11945	0.46	-1.6
2,572,620	+		OKGIIK_11945	0.46	-0.7
2,572,621	-		OKGIIK_11945	0.46	-1.4
2,572,621	-		OKGIIK_11945	0.46	-1.0
2,572,621	-		OKGIIK_11945	0.46	-0.7
2,572,621	-		OKGIIK_11945	0.46	-0.8
2,572,621	-		OKGIIK_11945	0.46	-0.7
2,572,621	-		OKGIIK_11945	0.46	-0.4
2,572,621	-		OKGIIK_11945	0.46	-1.0
2,572,621	-		OKGIIK_11945	0.46	-1.7
2,572,621	-		OKGIIK_11945	0.46	-0.6
2,572,621	-		OKGIIK_11945	0.46	-0.4
2,572,621	-		OKGIIK_11945	0.46	-0.1
2,572,642	+		OKGIIK_11945	0.47	-1.9
2,572,642	+		OKGIIK_11945	0.47	+0.6
2,572,642	+		OKGIIK_11945	0.47	-1.2
2,572,643	-		OKGIIK_11945	0.48	+1.6
2,572,644	+		OKGIIK_11945	0.48	-1.1
2,572,644	+		OKGIIK_11945	0.48	+0.3
2,572,644	+		OKGIIK_11945	0.48	+0.7
2,572,644	+		OKGIIK_11945	0.48	-1.2
2,572,644	+		OKGIIK_11945	0.48	-0.7
2,572,644	+		OKGIIK_11945	0.48	-0.4
2,572,644	+		OKGIIK_11945	0.48	-1.0
2,572,644	+		OKGIIK_11945	0.48	-3.5
2,572,644	+		OKGIIK_11945	0.48	-2.1
2,572,645	-		OKGIIK_11945	0.48	-0.7
2,572,645	-		OKGIIK_11945	0.48	-0.4
2,572,665	+		OKGIIK_11945	0.49	-3.0
2,572,665	+		OKGIIK_11945	0.49	-1.4
2,572,665	+		OKGIIK_11945	0.49	-0.7
2,572,665	-		OKGIIK_11945	0.49	-0.7
2,572,666	-		OKGIIK_11945	0.50	-1.3
2,572,666	-		OKGIIK_11945	0.50	-0.4
2,572,666	-		OKGIIK_11945	0.50	-1.4
2,572,666	-		OKGIIK_11945	0.50	-1.1
2,572,666	-		OKGIIK_11945	0.50	+0.0
2,572,666	-		OKGIIK_11945	0.50	+0.0
2,572,666	-		OKGIIK_11945	0.50	-1.0
2,572,824	+		OKGIIK_11945	0.63	-0.4
2,572,824	+		OKGIIK_11945	0.63	-1.6
2,572,824	+		OKGIIK_11945	0.63	-0.4
2,572,824	+		OKGIIK_11945	0.63	-1.4
2,572,824	+		OKGIIK_11945	0.63	+0.0
2,572,824	+		OKGIIK_11945	0.63	-0.6
2,572,824	+		OKGIIK_11945	0.63	-0.4
2,572,824	+		OKGIIK_11945	0.63	-1.9
2,572,825	-		OKGIIK_11945	0.63	-1.3
2,572,825	-		OKGIIK_11945	0.63	-2.4
2,572,825	-		OKGIIK_11945	0.63	-2.5
2,572,825	-		OKGIIK_11945	0.63	-0.4
2,572,825	-		OKGIIK_11945	0.63	+0.9
2,572,825	-		OKGIIK_11945	0.63	-0.6
2,572,825	-		OKGIIK_11945	0.63	-0.7
2,572,825	-		OKGIIK_11945	0.63	-2.3
2,572,825	-		OKGIIK_11945	0.63	-0.4
2,572,825	-		OKGIIK_11945	0.63	-0.4
2,572,825	-		OKGIIK_11945	0.63	-0.7
2,572,825	-		OKGIIK_11945	0.63	-1.0
2,572,825	-		OKGIIK_11945	0.63	-1.3
2,572,914	+		OKGIIK_11945	0.71	-1.5
2,572,915	-		OKGIIK_11945	0.71	+0.0
2,572,915	-		OKGIIK_11945	0.71	+0.0
2,572,915	-		OKGIIK_11945	0.71	-2.9
2,572,915	-		OKGIIK_11945	0.71	-0.4
2,572,915	-		OKGIIK_11945	0.71	-1.7
2,572,915	-		OKGIIK_11945	0.71	-0.4
2,572,915	-		OKGIIK_11945	0.71	-1.9
2,572,915	-		OKGIIK_11945	0.71	-0.7
2,572,926	+		OKGIIK_11945	0.72	+0.9
2,572,926	+		OKGIIK_11945	0.72	+0.0
2,572,926	+		OKGIIK_11945	0.72	-1.9
2,572,926	+		OKGIIK_11945	0.72	-1.8
2,572,926	+		OKGIIK_11945	0.72	-0.7
2,572,926	+		OKGIIK_11945	0.72	-1.0
2,572,926	+		OKGIIK_11945	0.72	-0.6
2,572,926	+		OKGIIK_11945	0.72	-1.0
2,572,927	-		OKGIIK_11945	0.72	-2.5
2,572,927	-		OKGIIK_11945	0.72	-0.4
2,572,927	-		OKGIIK_11945	0.72	+0.8
2,572,927	-		OKGIIK_11945	0.72	+0.0
2,572,927	-		OKGIIK_11945	0.72	-0.7
2,572,927	-		OKGIIK_11945	0.72	+1.2
2,572,927	-		OKGIIK_11945	0.72	-0.7
2,572,927	-		OKGIIK_11945	0.72	-0.2
2,572,927	-		OKGIIK_11945	0.72	+0.6
2,572,927	-		OKGIIK_11945	0.72	-0.2
2,572,975	-		OKGIIK_11945	0.76	+0.0
2,572,975	-		OKGIIK_11945	0.76	-1.2
2,572,975	-		OKGIIK_11945	0.76	-0.4
2,573,141	+				-3.0
2,573,141	+				-1.2
2,573,141	+				-2.5
2,573,142	-				-1.2
2,573,142	-				-2.0
2,573,247	+				-0.7
2,573,247	+				-0.4
2,573,247	+				-2.1
2,573,247	+				-0.7
2,573,247	+				-1.2
2,573,247	+				-0.4
2,573,247	+				-0.3
2,573,247	+				-1.8
2,573,247	+				-2.4
2,573,247	+				-2.3
2,573,247	+				-0.4
2,573,248	-				-1.0
2,573,248	-				-0.4
2,573,248	-				-2.7
2,573,248	-				-0.7
2,573,248	-				-0.4
2,573,248	-				-1.0
2,573,248	-				-1.0
2,573,248	-				-0.4
2,573,318	+				-0.7
2,573,318	+				+0.0
2,573,318	+				-2.7
2,573,318	+				-0.4
2,573,318	+				-0.7
2,573,318	+				-1.7
2,573,318	+				+0.4
2,573,318	+				-1.9
2,573,318	+				+0.6
2,573,318	+				+1.0
2,573,318	+				-0.7
2,573,318	+				-1.4
2,573,318	+				+0.1
2,573,318	+				-0.4
2,573,318	+				-1.0
2,573,318	+				-1.7
2,573,318	+				+0.5
2,573,318	+				-1.2
2,573,318	+				-1.5
2,573,318	+				-1.0
2,573,318	+				-1.5
2,573,318	+				-0.4
2,573,318	+				-1.4
2,573,318	+				+0.0
2,573,318	+				-1.0
2,573,318	+				-0.7
2,573,318	+				-1.0
2,573,318	+				-1.5
2,573,318	+				+1.2
2,573,318	+				-0.7
2,573,318	+				-0.7
2,573,319	-				+1.2
2,573,319	-				-0.3
2,573,319	-				+0.0
2,573,319	-				-0.4
2,573,319	-				-1.4
2,573,319	-				-0.4
2,573,319	-				-1.0
2,573,319	-				-2.0
2,573,319	-				-0.4
2,573,319	-				-1.4
2,573,319	-				+0.3
2,573,319	-				-1.4
2,573,319	-				-1.9
2,573,319	-				-0.6
2,573,319	-				+1.6
2,573,319	-				-1.3
2,573,319	-				-1.7
2,573,319	-				+1.2
2,573,319	-				-1.2
2,573,319	-				-1.4
2,573,319	-				-0.4
2,573,319	-				-2.8
2,573,319	-				-2.3
2,573,319	-				-1.4
2,573,319	-				+0.6
2,573,319	-				-2.2
2,573,319	-				-1.2
2,573,319	-				-0.7
2,573,319	-				+0.6
2,573,319	-				+0.6
2,573,319	-				-1.0
2,573,319	-				-1.2
2,573,319	-				-1.3
2,573,319	-				-1.7
2,573,319	-				-0.4
2,573,319	-				+0.8
2,573,319	-				+0.3
2,573,319	-				-0.8
2,573,319	-				-1.2
2,573,319	-				-2.2
2,573,340	+				+0.6
2,573,341	-				-1.3
2,573,527	+				-0.4
2,573,527	+				-2.9
2,573,527	+				+0.3
2,573,527	+				-1.1
2,573,527	+				+2.4
2,573,607	+	lolD	OKGIIK_11950	0.20	+0.9
2,573,607	+	lolD	OKGIIK_11950	0.20	+1.2
2,573,607	+	lolD	OKGIIK_11950	0.20	-0.2
2,573,607	+	lolD	OKGIIK_11950	0.20	+0.0
2,573,607	+	lolD	OKGIIK_11950	0.20	-0.4
2,573,607	+	lolD	OKGIIK_11950	0.20	+0.6
2,573,607	+	lolD	OKGIIK_11950	0.20	-0.4
2,573,607	+	lolD	OKGIIK_11950	0.20	-0.4
2,573,607	+	lolD	OKGIIK_11950	0.20	+0.0
2,573,607	+	lolD	OKGIIK_11950	0.20	-2.7
2,573,607	+	lolD	OKGIIK_11950	0.20	-2.7
2,573,608	-	lolD	OKGIIK_11950	0.20	-0.4
2,573,608	-	lolD	OKGIIK_11950	0.20	-1.7
2,573,608	-	lolD	OKGIIK_11950	0.20	-2.0
2,573,608	-	lolD	OKGIIK_11950	0.20	-1.6
2,573,608	-	lolD	OKGIIK_11950	0.20	+1.1
2,573,872	+	lolD	OKGIIK_11950	0.59	-1.0
2,573,872	+	lolD	OKGIIK_11950	0.59	-2.7
2,573,872	+	lolD	OKGIIK_11950	0.59	-1.6
2,573,872	+	lolD	OKGIIK_11950	0.59	-1.6
2,573,872	+	lolD	OKGIIK_11950	0.59	-1.0
2,573,872	+	lolD	OKGIIK_11950	0.59	-2.2
2,573,873	-	lolD	OKGIIK_11950	0.59	-3.5
2,573,873	-	lolD	OKGIIK_11950	0.59	-2.0
2,573,873	-	lolD	OKGIIK_11950	0.59	+0.0
2,574,115	+				-1.2
2,574,115	+				+0.1
2,574,115	+				+1.1
2,574,115	+				+0.6
2,574,115	+				-0.7
2,574,115	+				+0.6
2,574,115	+				-0.7
2,574,116	-				-1.4
2,574,116	-				-1.2
2,574,116	-				+0.4
2,574,116	-				-0.6
2,574,116	-				-0.7
2,574,116	-				-1.0
2,574,149	+				+1.9
2,574,149	+				-1.7
2,574,150	-				-0.3
2,574,150	-				-0.3
2,574,150	-				-0.6
2,574,187	-				-0.7
2,574,187	-				-1.2
2,574,272	+				-1.2
2,574,272	+				-1.9
2,574,272	+				-1.0
2,574,273	-				-1.3
2,574,296	+				-0.4
2,574,296	+				-0.7
2,574,296	+				-1.5
2,574,297	-				-0.2
2,574,297	-				-0.7
2,574,297	-				+0.9
2,574,297	-				+0.3
2,574,586	+		OKGIIK_11955	0.24	-2.8
2,574,627	+		OKGIIK_11955	0.27	-0.4
2,574,627	+		OKGIIK_11955	0.27	-0.4
2,574,627	+		OKGIIK_11955	0.27	-0.7
2,574,628	-		OKGIIK_11955	0.27	+0.7
2,574,746	+		OKGIIK_11955	0.36	-1.5
2,574,746	+		OKGIIK_11955	0.36	-1.6
2,574,746	+		OKGIIK_11955	0.36	-1.4
2,574,746	+		OKGIIK_11955	0.36	-1.7
2,574,746	+		OKGIIK_11955	0.36	+0.0
2,574,746	+		OKGIIK_11955	0.36	-0.8
2,574,746	+		OKGIIK_11955	0.36	-1.3
2,574,746	+		OKGIIK_11955	0.36	-0.2
2,574,746	+		OKGIIK_11955	0.36	-0.3
2,574,746	+		OKGIIK_11955	0.36	-0.4
2,574,747	-		OKGIIK_11955	0.37	-0.7
2,574,747	-		OKGIIK_11955	0.37	-1.3
2,574,747	-		OKGIIK_11955	0.37	-1.2
2,574,747	-		OKGIIK_11955	0.37	-2.6
2,574,747	-		OKGIIK_11955	0.37	-1.6
2,574,747	-		OKGIIK_11955	0.37	+1.3
2,574,747	-		OKGIIK_11955	0.37	-0.4
2,574,747	-		OKGIIK_11955	0.37	-3.0
2,574,747	-		OKGIIK_11955	0.37	-0.4
2,574,747	-		OKGIIK_11955	0.37	-0.3
2,574,747	-		OKGIIK_11955	0.37	+0.0
2,574,747	-		OKGIIK_11955	0.37	-0.4
2,574,911	+		OKGIIK_11955	0.50	-1.4
2,574,911	+		OKGIIK_11955	0.50	-0.7
2,574,911	+		OKGIIK_11955	0.50	+0.6
2,574,911	+		OKGIIK_11955	0.50	-0.5
2,574,911	+		OKGIIK_11955	0.50	-0.6
2,574,912	-		OKGIIK_11955	0.50	-1.7
2,574,912	-		OKGIIK_11955	0.50	-1.0
2,574,912	-		OKGIIK_11955	0.50	-0.5
2,574,912	-		OKGIIK_11955	0.50	-0.9
2,574,912	-		OKGIIK_11955	0.50	-0.4
2,574,912	-		OKGIIK_11955	0.50	-0.2