Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11815

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,543,221	+				-0.4
2,543,221	+				-0.0
2,543,221	+				+0.2
2,543,222	-				-1.7
2,543,376	+				-0.8
2,543,376	+				-0.4
2,543,532	+				+0.4
2,543,532	+				+0.7
2,543,532	+				+1.1
2,543,532	+				-0.3
2,543,532	+				-0.5
2,543,533	-				-1.0
2,543,533	-				-0.8
2,543,533	-				-0.5
2,543,569	+				+0.5
2,543,569	+				-0.0
2,543,569	+				-1.0
2,543,569	+				-0.4
2,543,569	+				-2.3
2,543,569	+				-0.0
2,543,569	+				-0.5
2,543,569	+				-0.5
2,543,569	+				-0.0
2,543,569	+				+0.4
2,543,569	+				+0.5
2,543,569	+				+0.9
2,543,569	+				-0.6
2,543,570	-				-1.0
2,543,570	-				-1.1
2,543,570	-				-1.8
2,543,570	-				+0.9
2,543,570	-				-1.0
2,543,570	-				-0.5
2,543,570	-				+1.1
2,543,570	-				+1.3
2,543,578	+				+1.3
2,543,578	+				-0.5
2,543,578	+				-0.3
2,543,578	+				-0.0
2,543,578	+				-2.5
2,543,579	-				+2.0
2,543,579	-				-0.3
2,543,581	+				+0.3
2,543,581	+				+0.2
2,543,581	+				+0.3
2,543,581	+				-0.3
2,543,581	+				+0.2
2,543,581	+				+0.3
2,543,581	+				+1.9
2,543,581	+				+0.2
2,543,581	+				+1.0
2,543,582	-				+1.0
2,543,692	+		OKGIIK_11810	0.20	-0.0
2,543,692	+		OKGIIK_11810	0.20	-0.3
2,543,693	-		OKGIIK_11810	0.20	-0.3
2,543,693	-		OKGIIK_11810	0.20	-0.3
2,543,693	-		OKGIIK_11810	0.20	-0.8
2,543,842	+		OKGIIK_11810	0.44	-2.4
2,543,842	+		OKGIIK_11810	0.44	-1.0
2,543,842	+		OKGIIK_11810	0.44	-1.1
2,543,843	-		OKGIIK_11810	0.44	-0.4
2,543,843	-		OKGIIK_11810	0.44	+1.0
2,543,843	-		OKGIIK_11810	0.44	+0.7
2,543,860	+		OKGIIK_11810	0.47	-0.0
2,543,860	+		OKGIIK_11810	0.47	+0.7
2,543,860	+		OKGIIK_11810	0.47	-0.8
2,543,860	+		OKGIIK_11810	0.47	-0.6
2,543,860	+		OKGIIK_11810	0.47	-0.9
2,543,860	+		OKGIIK_11810	0.47	+0.5
2,543,860	+		OKGIIK_11810	0.47	-1.1
2,543,860	+		OKGIIK_11810	0.47	-0.4
2,543,860	+		OKGIIK_11810	0.47	+0.2
2,543,861	-		OKGIIK_11810	0.47	-0.0
2,543,861	-		OKGIIK_11810	0.47	+1.7
2,543,861	-		OKGIIK_11810	0.47	+0.7
2,543,861	-		OKGIIK_11810	0.47	-1.1
2,543,861	-		OKGIIK_11810	0.47	-0.7
2,543,861	-		OKGIIK_11810	0.47	+1.3
2,543,861	-		OKGIIK_11810	0.47	+1.3
2,543,886	-		OKGIIK_11810	0.51	-1.0
2,543,902	+		OKGIIK_11810	0.53	-0.0
2,543,903	-		OKGIIK_11810	0.53	-0.7
2,544,013	+		OKGIIK_11810	0.71	+0.5
2,544,013	+		OKGIIK_11810	0.71	-0.2
2,544,013	+		OKGIIK_11810	0.71	-0.5
2,544,013	+		OKGIIK_11810	0.71	+2.3
2,544,013	+		OKGIIK_11810	0.71	-1.6
2,544,013	+		OKGIIK_11810	0.71	-0.5
2,544,013	+		OKGIIK_11810	0.71	-0.7
2,544,013	+		OKGIIK_11810	0.71	-2.5
2,544,013	+		OKGIIK_11810	0.71	+1.0
2,544,013	+		OKGIIK_11810	0.71	-1.8
2,544,013	+		OKGIIK_11810	0.71	+0.6
2,544,013	+		OKGIIK_11810	0.71	+0.4
2,544,014	-		OKGIIK_11810	0.71	+0.4
2,544,014	-		OKGIIK_11810	0.71	-0.5
2,544,014	-		OKGIIK_11810	0.71	-1.1
2,544,014	-		OKGIIK_11810	0.71	-0.3
2,544,014	-		OKGIIK_11810	0.71	-0.5
2,544,014	-		OKGIIK_11810	0.71	-0.5
2,544,014	-		OKGIIK_11810	0.71	+0.6
2,544,014	-		OKGIIK_11810	0.71	-0.4
2,544,014	-		OKGIIK_11810	0.71	-0.0
2,544,014	-		OKGIIK_11810	0.71	+0.3
2,544,049	+		OKGIIK_11810	0.77	-1.9
2,544,050	-		OKGIIK_11810	0.77	+2.6
2,544,230	+		OKGIIK_11815	0.11	-0.1
2,544,230	+		OKGIIK_11815	0.11	+0.9
2,544,230	+		OKGIIK_11815	0.11	+1.6
2,544,231	-		OKGIIK_11815	0.11	+0.1
2,544,231	-		OKGIIK_11815	0.11	+2.6
2,544,231	-		OKGIIK_11815	0.11	+1.0
2,544,260	+		OKGIIK_11815	0.22	+1.3
2,544,468	-				-0.5
2,544,468	-				+1.2
2,544,536	+				-0.0
2,544,755	+				-1.4
2,544,755	+				-0.8
2,544,755	+				+0.7
2,544,755	+				-1.8
2,544,755	+				-0.8
2,544,755	+				-0.5
2,544,755	+				-0.0
2,544,756	-				-1.0
2,544,756	-				+1.3
2,544,756	-				-0.8
2,544,756	-				+0.6
2,544,847	-				+1.2
2,545,030	+	ppc	OKGIIK_11820	0.15	+0.1
2,545,030	+	ppc	OKGIIK_11820	0.15	-1.5
2,545,030	+	ppc	OKGIIK_11820	0.15	+2.3
2,545,030	+	ppc	OKGIIK_11820	0.15	-1.3
2,545,031	-	ppc	OKGIIK_11820	0.15	+1.0
2,545,031	-	ppc	OKGIIK_11820	0.15	+1.2
2,545,031	-	ppc	OKGIIK_11820	0.15	+0.7
2,545,031	-	ppc	OKGIIK_11820	0.15	-0.8
2,545,031	-	ppc	OKGIIK_11820	0.15	-0.8
2,545,031	-	ppc	OKGIIK_11820	0.15	-0.8
2,545,031	-	ppc	OKGIIK_11820	0.15	+2.8
2,545,062	-	ppc	OKGIIK_11820	0.16	+0.2
2,545,214	+	ppc	OKGIIK_11820	0.22	-0.8
2,545,215	-	ppc	OKGIIK_11820	0.22	-0.1
2,545,248	+	ppc	OKGIIK_11820	0.23	-0.2
2,545,250	+	ppc	OKGIIK_11820	0.23	+0.9
2,545,250	+	ppc	OKGIIK_11820	0.23	+0.3
2,545,250	+	ppc	OKGIIK_11820	0.23	-0.4
2,545,398	-	ppc	OKGIIK_11820	0.29	-0.8
2,545,398	-	ppc	OKGIIK_11820	0.29	-0.0