Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11800

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,539,924	+				+0.2
2,539,924	+				-2.2
2,539,924	+				-3.0
2,539,953	+				-0.9
2,539,954	-				-1.4
2,539,962	-				-0.8
2,539,967	+				+0.0
2,539,968	-				-0.7
2,539,968	-				-1.7
2,539,968	-				-0.7
2,540,001	+				-1.1
2,540,002	-				-0.4
2,540,002	-				-0.7
2,540,040	+				-1.3
2,540,041	-				-0.7
2,540,041	-				-1.4
2,540,041	-				-0.6
2,540,041	-				-0.7
2,540,120	+				-1.1
2,540,120	+				-0.3
2,540,120	+				-1.9
2,540,120	+				-0.9
2,540,120	+				-0.4
2,540,120	+				-1.0
2,540,120	+				-1.9
2,540,120	+				-2.0
2,540,120	+				-1.0
2,540,120	+				-1.0
2,540,121	+				-1.9
2,540,121	-				-1.4
2,540,121	-				-0.6
2,540,175	+				-2.5
2,540,176	-				-1.2
2,540,176	-				-2.1
2,540,217	+				-2.1
2,540,217	+				-1.8
2,540,218	-				-0.4
2,540,222	+				-1.0
2,540,222	+				-1.0
2,540,222	+				-0.7
2,540,223	-				-0.7
2,540,223	-				-2.3
2,540,223	-				-1.9
2,540,223	-				+0.6
2,540,273	+		OKGIIK_11795	0.16	+0.0
2,540,273	+		OKGIIK_11795	0.16	-1.4
2,540,273	+		OKGIIK_11795	0.16	+0.6
2,540,273	+		OKGIIK_11795	0.16	-0.7
2,540,273	+		OKGIIK_11795	0.16	-1.7
2,540,274	-		OKGIIK_11795	0.16	+1.0
2,540,274	-		OKGIIK_11795	0.16	-0.7
2,540,274	-		OKGIIK_11795	0.16	-0.4
2,540,274	-		OKGIIK_11795	0.16	-1.7
2,540,274	-		OKGIIK_11795	0.16	-1.2
2,540,393	+		OKGIIK_11795	0.37	-0.4
2,540,393	+		OKGIIK_11795	0.37	-1.7
2,540,393	+		OKGIIK_11795	0.37	-2.0
2,540,393	+		OKGIIK_11795	0.37	-1.0
2,540,393	+		OKGIIK_11795	0.37	-1.9
2,540,393	+		OKGIIK_11795	0.37	-1.2
2,540,393	+		OKGIIK_11795	0.37	-1.0
2,540,393	+		OKGIIK_11795	0.37	+0.9
2,540,393	+		OKGIIK_11795	0.37	-0.6
2,540,393	+		OKGIIK_11795	0.37	-1.0
2,540,393	+		OKGIIK_11795	0.37	+0.2
2,540,394	-		OKGIIK_11795	0.37	-0.6
2,540,394	-		OKGIIK_11795	0.37	-2.8
2,540,394	-		OKGIIK_11795	0.37	-0.9
2,540,394	-		OKGIIK_11795	0.37	+0.8
2,540,394	-		OKGIIK_11795	0.37	-0.1
2,540,394	-		OKGIIK_11795	0.37	-0.4
2,540,394	-		OKGIIK_11795	0.37	-2.2
2,540,499	+		OKGIIK_11795	0.55	-1.6
2,540,499	+		OKGIIK_11795	0.55	-0.7
2,540,499	+		OKGIIK_11795	0.55	-0.9
2,540,499	+		OKGIIK_11795	0.55	-0.7
2,540,499	+		OKGIIK_11795	0.55	-0.7
2,540,499	+		OKGIIK_11795	0.55	-0.4
2,540,499	+		OKGIIK_11795	0.55	+0.0
2,540,499	+		OKGIIK_11795	0.55	+0.1
2,540,499	+		OKGIIK_11795	0.55	-0.4
2,540,499	+		OKGIIK_11795	0.55	-1.7
2,540,499	+		OKGIIK_11795	0.55	-0.8
2,540,499	+		OKGIIK_11795	0.55	-1.3
2,540,500	-		OKGIIK_11795	0.56	-1.0
2,540,500	-		OKGIIK_11795	0.56	-2.0
2,540,500	-		OKGIIK_11795	0.56	-1.4
2,540,500	-		OKGIIK_11795	0.56	-1.0
2,540,500	-		OKGIIK_11795	0.56	-1.8
2,540,500	-		OKGIIK_11795	0.56	-0.7
2,540,500	-		OKGIIK_11795	0.56	-1.4
2,540,500	-		OKGIIK_11795	0.56	-0.3
2,540,500	-		OKGIIK_11795	0.56	-1.1
2,540,500	-		OKGIIK_11795	0.56	-1.1
2,540,500	-		OKGIIK_11795	0.56	+1.3
2,540,500	-		OKGIIK_11795	0.56	-0.7
2,540,500	-		OKGIIK_11795	0.56	-0.6
2,540,500	-		OKGIIK_11795	0.56	-1.7
2,540,500	-		OKGIIK_11795	0.56	-0.6
2,540,500	-		OKGIIK_11795	0.56	-2.4
2,540,500	-		OKGIIK_11795	0.56	+0.4
2,540,500	-		OKGIIK_11795	0.56	-0.4
2,540,500	-		OKGIIK_11795	0.56	-1.4
2,540,503	+		OKGIIK_11795	0.56	-1.4
2,540,503	+		OKGIIK_11795	0.56	-0.4
2,540,503	+		OKGIIK_11795	0.56	-2.1
2,540,503	+		OKGIIK_11795	0.56	-1.0
2,540,503	+		OKGIIK_11795	0.56	-1.4
2,540,503	+		OKGIIK_11795	0.56	-2.0
2,540,503	+		OKGIIK_11795	0.56	-1.9
2,540,503	+		OKGIIK_11795	0.56	-0.7
2,540,503	+		OKGIIK_11795	0.56	-2.1
2,540,504	-		OKGIIK_11795	0.56	+0.6
2,540,504	-		OKGIIK_11795	0.56	-0.8
2,540,504	-		OKGIIK_11795	0.56	+1.0
2,540,504	-		OKGIIK_11795	0.56	-0.7
2,540,504	-		OKGIIK_11795	0.56	-1.0
2,540,514	+		OKGIIK_11795	0.58	+1.2
2,540,630	+		OKGIIK_11795	0.78	-0.1
2,540,630	+		OKGIIK_11795	0.78	-0.7
2,540,631	-		OKGIIK_11795	0.79	+0.0
2,540,631	-		OKGIIK_11795	0.79	-0.7
2,540,688	-		OKGIIK_11795	0.89	-0.1
2,540,688	-		OKGIIK_11795	0.89	-0.9
2,540,696	-				-0.7
2,540,696	-				-1.1
2,540,698	-				-0.5
2,540,698	-				-0.1
2,540,748	+				-1.5
2,540,748	+				-0.4
2,540,748	+				-1.5
2,540,748	+				+0.0
2,540,748	+				-1.9
2,540,748	+				+0.0
2,540,748	+				-0.6
2,540,748	+				-0.7
2,540,748	+				-1.3
2,540,749	-				-0.4
2,540,749	-				-2.0
2,540,749	-				-0.4
2,540,749	-				-0.7
2,540,749	-				+0.3
2,540,749	-				-2.1
2,540,750	+				-0.7
2,540,750	+				-0.4
2,540,750	+				-2.2
2,540,750	+				+1.6
2,540,750	+				-1.4
2,540,750	+				-1.0
2,540,751	-				-0.7
2,540,751	-				-1.5
2,540,751	-				-1.7
2,540,751	-				-0.3
2,540,751	-				-1.0
2,540,751	-				+1.0
2,540,763	+				+0.6
2,541,057	+		OKGIIK_11800	0.26	-0.7
2,541,057	+		OKGIIK_11800	0.26	-1.0
2,541,057	+		OKGIIK_11800	0.26	-1.4
2,541,058	-		OKGIIK_11800	0.26	-0.4
2,541,058	-		OKGIIK_11800	0.26	-1.4
2,541,122	-		OKGIIK_11800	0.38	-0.2
2,541,122	-		OKGIIK_11800	0.38	+0.6
2,541,122	-		OKGIIK_11800	0.38	-0.5
2,541,122	-		OKGIIK_11800	0.38	-2.7
2,541,122	-		OKGIIK_11800	0.38	-1.0
2,541,274	+		OKGIIK_11800	0.66	-0.2
2,541,274	+		OKGIIK_11800	0.66	-1.5
2,541,274	+		OKGIIK_11800	0.66	-0.4
2,541,274	+		OKGIIK_11800	0.66	-0.7
2,541,275	-		OKGIIK_11800	0.66	-0.4
2,541,275	-		OKGIIK_11800	0.66	-2.6
2,541,531	+				-2.1
2,541,531	+				-1.0
2,541,531	+				-1.3
2,541,531	+				-0.7
2,541,531	+				-1.3
2,541,531	+				-1.0
2,541,531	+				-1.0
2,541,532	-				+0.3
2,541,532	-				-0.7
2,541,532	-				-2.5
2,541,532	-				+0.6
2,541,532	-				-0.2
2,541,532	-				-0.4
2,541,552	-				-0.7
2,541,552	-				+0.4
2,541,552	-				-0.4
2,541,844	-	ccmA	OKGIIK_11805	0.16	+0.0
2,542,233	+	ccmA	OKGIIK_11805	0.37	-0.4
2,542,234	-	ccmA	OKGIIK_11805	0.37	-0.9
2,542,234	-	ccmA	OKGIIK_11805	0.37	-1.4
2,542,234	-	ccmA	OKGIIK_11805	0.37	-1.5
2,542,242	+	ccmA	OKGIIK_11805	0.38	+0.4
2,542,242	+	ccmA	OKGIIK_11805	0.38	-0.6
2,542,242	+	ccmA	OKGIIK_11805	0.38	-2.5
2,542,242	+	ccmA	OKGIIK_11805	0.38	+0.0
2,542,242	+	ccmA	OKGIIK_11805	0.38	-0.4
2,542,242	+	ccmA	OKGIIK_11805	0.38	-0.4
2,542,242	+	ccmA	OKGIIK_11805	0.38	-2.0
2,542,242	+	ccmA	OKGIIK_11805	0.38	-0.8
2,542,242	+	ccmA	OKGIIK_11805	0.38	+1.6
2,542,242	+	ccmA	OKGIIK_11805	0.38	+0.1
2,542,242	+	ccmA	OKGIIK_11805	0.38	+1.2
2,542,242	+	ccmA	OKGIIK_11805	0.38	+0.6
2,542,242	+	ccmA	OKGIIK_11805	0.38	-1.6
2,542,243	-	ccmA	OKGIIK_11805	0.38	-1.4
2,542,243	-	ccmA	OKGIIK_11805	0.38	-1.8
2,542,243	-	ccmA	OKGIIK_11805	0.38	-0.7
2,542,243	-	ccmA	OKGIIK_11805	0.38	-0.4
2,542,243	-	ccmA	OKGIIK_11805	0.38	-0.7
2,542,243	-	ccmA	OKGIIK_11805	0.38	-1.2
2,542,243	-	ccmA	OKGIIK_11805	0.38	-0.2
2,542,243	-	ccmA	OKGIIK_11805	0.38	-0.0
2,542,243	-	ccmA	OKGIIK_11805	0.38	+1.6
2,542,243	-	ccmA	OKGIIK_11805	0.38	-0.4
2,542,243	-	ccmA	OKGIIK_11805	0.38	-0.7
2,542,243	-	ccmA	OKGIIK_11805	0.38	-1.9
2,542,243	-	ccmA	OKGIIK_11805	0.38	-0.4
2,542,243	-	ccmA	OKGIIK_11805	0.38	-0.7
2,542,243	-	ccmA	OKGIIK_11805	0.38	-1.6
2,542,243	-	ccmA	OKGIIK_11805	0.38	-0.4
2,542,243	-	ccmA	OKGIIK_11805	0.38	-0.1
2,542,243	-	ccmA	OKGIIK_11805	0.38	-2.1
2,542,286	+	ccmA	OKGIIK_11805	0.40	-1.2
2,542,286	+	ccmA	OKGIIK_11805	0.40	-0.9
2,542,287	-	ccmA	OKGIIK_11805	0.40	-0.7
2,542,287	-	ccmA	OKGIIK_11805	0.40	-0.3
2,542,287	-	ccmA	OKGIIK_11805	0.40	-0.4
2,542,287	-	ccmA	OKGIIK_11805	0.40	+0.6
2,542,287	-	ccmA	OKGIIK_11805	0.40	-0.4