Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11235

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,407,768	+				-1.1
2,407,768	+				-1.4
2,407,768	+				-0.5
2,407,768	+				-0.0
2,407,768	+				-1.5
2,407,768	+				+0.3
2,407,768	+				-1.0
2,407,768	+				+1.0
2,407,768	+				-0.5
2,407,768	+				-0.1
2,407,768	+				+0.2
2,407,768	+				-1.3
2,407,768	+				-0.9
2,407,768	+				-0.3
2,407,768	+				+0.5
2,407,768	+				+0.9
2,407,769	-				-0.6
2,407,769	-				+1.2
2,407,769	-				-0.7
2,407,769	-				-0.7
2,407,769	-				+1.1
2,407,769	-				-0.9
2,407,769	-				-0.3
2,407,769	-				-1.7
2,407,769	-				-2.4
2,407,769	-				-0.9
2,407,769	-				-1.1
2,407,769	-				+0.6
2,407,769	-				+0.9
2,407,769	-				-0.1
2,407,769	-				+0.3
2,407,834	-	rimI	OKGIIK_11225	0.13	+0.7
2,407,834	-	rimI	OKGIIK_11225	0.13	-0.5
2,407,834	-	rimI	OKGIIK_11225	0.13	-0.7
2,407,834	-	rimI	OKGIIK_11225	0.13	-0.1
2,407,836	+	rimI	OKGIIK_11225	0.14	-0.7
2,407,836	+	rimI	OKGIIK_11225	0.14	-1.5
2,407,836	+	rimI	OKGIIK_11225	0.14	-0.0
2,407,837	-	rimI	OKGIIK_11225	0.14	-0.5
2,407,837	-	rimI	OKGIIK_11225	0.14	+0.0
2,407,837	-	rimI	OKGIIK_11225	0.14	-0.7
2,407,837	-	rimI	OKGIIK_11225	0.14	-0.3
2,407,878	+	rimI	OKGIIK_11225	0.23	+0.3
2,407,878	+	rimI	OKGIIK_11225	0.23	-0.4
2,407,878	+	rimI	OKGIIK_11225	0.23	-0.7
2,407,878	+	rimI	OKGIIK_11225	0.23	-0.5
2,407,879	-	rimI	OKGIIK_11225	0.23	-1.4
2,408,154	+	rimI	OKGIIK_11225	0.81	+1.3
2,408,154	+	rimI	OKGIIK_11225	0.81	+2.6
2,408,154	+	rimI	OKGIIK_11225	0.81	-1.9
2,408,154	+	rimI	OKGIIK_11225	0.81	-1.4
2,408,154	+	rimI	OKGIIK_11225	0.81	+0.2
2,408,155	-	rimI	OKGIIK_11225	0.81	-0.1
2,408,155	-	rimI	OKGIIK_11225	0.81	-1.1
2,408,155	-	rimI	OKGIIK_11225	0.81	-0.6
2,408,155	-	rimI	OKGIIK_11225	0.81	+0.3
2,408,182	+	rimI	OKGIIK_11225	0.87	+0.7
2,408,183	-	rimI	OKGIIK_11225	0.87	-0.0
2,408,795	+				-0.0
2,408,795	+				-1.1
2,408,795	+				+2.1
2,408,796	-				-0.1
2,409,222	-	pssA	OKGIIK_11235	0.64	+0.2
2,409,222	-	pssA	OKGIIK_11235	0.64	+1.2
2,409,222	-	pssA	OKGIIK_11235	0.64	+0.9
2,409,276	-	pssA	OKGIIK_11235	0.71	+1.8
2,409,456	-				-1.0
2,409,456	-				+1.2
2,409,533	+				-0.3
2,409,533	+				-0.0
2,409,534	-				-0.1
2,409,534	-				-0.4
2,409,534	-				+1.0
2,409,534	-				-0.7
2,409,534	-				+1.3
2,409,534	-				+1.0
2,409,534	-				-0.3
2,409,534	-				+0.3
2,409,571	+				-1.4
2,409,571	+				-0.5
2,409,571	+				+0.5
2,409,572	-				+0.3
2,409,579	+				-0.3
2,409,579	+				+1.7
2,409,579	+				+0.5
2,409,579	+				-0.5
2,409,579	+				-1.0
2,409,580	-				+0.9
2,409,675	+		OKGIIK_11240	0.15	-0.5
2,409,675	+		OKGIIK_11240	0.15	+1.7
2,409,675	+		OKGIIK_11240	0.15	-1.7
2,409,675	+		OKGIIK_11240	0.15	-0.9
2,409,675	+		OKGIIK_11240	0.15	+0.3
2,409,676	-		OKGIIK_11240	0.15	+1.1
2,409,676	-		OKGIIK_11240	0.15	+1.1
2,409,676	-		OKGIIK_11240	0.15	+0.6
2,409,676	-		OKGIIK_11240	0.15	-2.3
2,409,676	-		OKGIIK_11240	0.15	-1.4
2,409,708	+		OKGIIK_11240	0.23	-0.3
2,409,708	+		OKGIIK_11240	0.23	-1.0
2,410,005	+				-0.3
2,410,006	-				-1.9
2,410,006	-				-1.0
2,410,006	-				+2.0
2,410,014	+				-0.9
2,410,014	+				-1.2
2,410,014	+				-0.9
2,410,014	+				+0.7
2,410,015	-				-0.5
2,410,015	-				-0.7
2,410,015	-				-0.6
2,410,105	+				+1.0
2,410,105	+				-0.0
2,410,106	-				+1.5
2,410,106	-				-2.5
2,410,110	+				-1.5
2,410,110	+				-0.0