Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11130

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,389,860	+	pilU	OKGIIK_11125	0.57	+1.7
2,389,860	+	pilU	OKGIIK_11125	0.57	-2.3
2,389,860	+	pilU	OKGIIK_11125	0.57	+0.3
2,389,860	+	pilU	OKGIIK_11125	0.57	-1.0
2,389,860	+	pilU	OKGIIK_11125	0.57	-0.8
2,389,860	+	pilU	OKGIIK_11125	0.57	+0.0
2,389,861	-	pilU	OKGIIK_11125	0.57	-0.3
2,389,861	-	pilU	OKGIIK_11125	0.57	-1.0
2,389,861	-	pilU	OKGIIK_11125	0.57	+0.2
2,389,861	-	pilU	OKGIIK_11125	0.57	-0.7
2,389,861	-	pilU	OKGIIK_11125	0.57	-0.5
2,389,861	-	pilU	OKGIIK_11125	0.57	-0.7
2,390,091	+	pilU	OKGIIK_11125	0.77	+0.2
2,390,091	+	pilU	OKGIIK_11125	0.77	-0.7
2,390,091	+	pilU	OKGIIK_11125	0.77	-1.5
2,390,091	+	pilU	OKGIIK_11125	0.77	+1.2
2,390,091	+	pilU	OKGIIK_11125	0.77	-0.3
2,390,091	+	pilU	OKGIIK_11125	0.77	+0.3
2,390,091	+	pilU	OKGIIK_11125	0.77	+0.2
2,390,092	-	pilU	OKGIIK_11125	0.77	+0.7
2,390,365	+				-0.3
2,390,365	+				+0.4
2,390,365	+				-1.4
2,390,365	+				-0.4
2,390,365	+				+0.3
2,390,365	+				+0.7
2,390,366	-				-0.5
2,390,366	-				-0.7
2,390,366	-				+0.2
2,390,366	-				+0.0
2,390,579	+				+1.3
2,390,580	-				+0.5
2,390,580	-				+1.9
2,390,580	-				+0.3
2,390,580	-				+0.3
2,390,684	+	pilT	OKGIIK_11130	0.13	+0.1
2,390,684	+	pilT	OKGIIK_11130	0.13	-0.3
2,390,684	+	pilT	OKGIIK_11130	0.13	+0.8
2,390,684	+	pilT	OKGIIK_11130	0.13	+0.4
2,390,684	+	pilT	OKGIIK_11130	0.13	-0.9
2,390,684	+	pilT	OKGIIK_11130	0.13	+1.7
2,390,684	+	pilT	OKGIIK_11130	0.13	+1.7
2,390,684	+	pilT	OKGIIK_11130	0.13	-0.8
2,390,684	+	pilT	OKGIIK_11130	0.13	+2.9
2,390,684	+	pilT	OKGIIK_11130	0.13	+1.0
2,390,684	+	pilT	OKGIIK_11130	0.13	-0.8
2,390,684	+	pilT	OKGIIK_11130	0.13	-0.1
2,390,684	+	pilT	OKGIIK_11130	0.13	+0.1
2,390,684	+	pilT	OKGIIK_11130	0.13	+0.2
2,390,684	+	pilT	OKGIIK_11130	0.13	+0.3
2,390,684	+	pilT	OKGIIK_11130	0.13	-1.3
2,390,684	+	pilT	OKGIIK_11130	0.13	+0.7
2,390,684	+	pilT	OKGIIK_11130	0.13	+1.3
2,390,684	+	pilT	OKGIIK_11130	0.13	+1.3
2,390,685	-	pilT	OKGIIK_11130	0.13	+0.5
2,390,685	-	pilT	OKGIIK_11130	0.13	+1.8
2,390,685	-	pilT	OKGIIK_11130	0.13	+1.5
2,390,685	-	pilT	OKGIIK_11130	0.13	-0.1
2,390,685	-	pilT	OKGIIK_11130	0.13	+1.5
2,390,685	-	pilT	OKGIIK_11130	0.13	+0.5
2,390,685	-	pilT	OKGIIK_11130	0.13	-0.3
2,390,685	-	pilT	OKGIIK_11130	0.13	+1.3
2,390,685	-	pilT	OKGIIK_11130	0.13	+0.1
2,390,685	-	pilT	OKGIIK_11130	0.13	-1.0
2,390,685	-	pilT	OKGIIK_11130	0.13	+0.9
2,390,685	-	pilT	OKGIIK_11130	0.13	+0.7
2,390,685	-	pilT	OKGIIK_11130	0.13	+0.5
2,390,685	-	pilT	OKGIIK_11130	0.13	+1.4
2,390,685	-	pilT	OKGIIK_11130	0.13	+0.3
2,390,685	-	pilT	OKGIIK_11130	0.13	-0.8
2,390,685	-	pilT	OKGIIK_11130	0.13	+0.2
2,390,685	-	pilT	OKGIIK_11130	0.13	+1.8
2,390,685	-	pilT	OKGIIK_11130	0.13	-1.0
2,390,917	+	pilT	OKGIIK_11130	0.35	+0.0
2,390,917	+	pilT	OKGIIK_11130	0.35	+1.0
2,390,918	-	pilT	OKGIIK_11130	0.35	+0.7
2,390,918	-	pilT	OKGIIK_11130	0.35	-1.1
2,390,918	-	pilT	OKGIIK_11130	0.35	+0.2
2,390,918	-	pilT	OKGIIK_11130	0.35	-0.1
2,391,134	+	pilT	OKGIIK_11130	0.56	+1.3
2,391,135	-	pilT	OKGIIK_11130	0.56	+0.8
2,391,183	+	pilT	OKGIIK_11130	0.61	+1.3
2,391,184	-	pilT	OKGIIK_11130	0.61	+0.7
2,391,401	+	pilT	OKGIIK_11130	0.82	+2.6
2,391,401	+	pilT	OKGIIK_11130	0.82	+0.9
2,391,401	+	pilT	OKGIIK_11130	0.82	+2.3
2,391,434	+	pilT	OKGIIK_11130	0.85	+0.4
2,391,434	+	pilT	OKGIIK_11130	0.85	+0.5
2,391,434	+	pilT	OKGIIK_11130	0.85	+1.1
2,391,434	+	pilT	OKGIIK_11130	0.85	+1.9
2,391,435	-	pilT	OKGIIK_11130	0.85	-0.8
2,391,435	-	pilT	OKGIIK_11130	0.85	+0.2
2,391,435	-	pilT	OKGIIK_11130	0.85	+1.5
2,391,624	+				-0.3
2,391,624	+				-1.0
2,391,624	+				-0.6
2,391,734	+				-0.3
2,391,734	+				-0.3
2,391,746	+				+0.5
2,391,746	+				+0.0
2,391,746	+				-1.3
2,391,746	+				-1.1
2,391,747	-				+1.3
2,391,750	-				-0.5
2,391,750	-				-0.4
2,391,750	-				-1.1
2,391,750	-				-2.4
2,391,750	-				+0.3
2,391,899	+				+0.3
2,391,904	+				-2.0
2,391,904	+				+0.2
2,391,904	+				+1.3
2,391,904	+				+0.5
2,391,904	+				-0.7
2,391,904	+				-0.4
2,391,905	-				+1.3
2,391,905	-				-0.9
2,391,905	-				-0.9
2,391,905	-				-0.2
2,391,944	+				+0.9
2,391,944	+				+0.0
2,391,945	-				+0.0
2,391,945	-				+0.0
2,392,087	+	proC	OKGIIK_11135	0.19	-0.3
2,392,087	+	proC	OKGIIK_11135	0.19	+0.2
2,392,088	-	proC	OKGIIK_11135	0.19	-0.8
2,392,465	+	proC	OKGIIK_11135	0.64	+0.1
2,392,465	+	proC	OKGIIK_11135	0.64	+0.0
2,392,465	+	proC	OKGIIK_11135	0.64	-0.4
2,392,466	-	proC	OKGIIK_11135	0.64	-0.3
2,392,466	-	proC	OKGIIK_11135	0.64	-0.3
2,392,466	-	proC	OKGIIK_11135	0.64	+0.5
2,392,466	-	proC	OKGIIK_11135	0.64	-0.7