Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_10945

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,343,415	+		OKGIIK_10940	0.31	-0.5
2,343,415	+		OKGIIK_10940	0.31	+1.0
2,343,415	+		OKGIIK_10940	0.31	-0.1
2,343,415	+		OKGIIK_10940	0.31	-0.8
2,343,415	+		OKGIIK_10940	0.31	+1.5
2,343,415	+		OKGIIK_10940	0.31	-1.4
2,343,415	+		OKGIIK_10940	0.31	-0.8
2,343,415	+		OKGIIK_10940	0.31	-2.7
2,343,415	+		OKGIIK_10940	0.31	+0.3
2,343,415	+		OKGIIK_10940	0.31	-2.2
2,343,415	+		OKGIIK_10940	0.31	-2.8
2,343,415	+		OKGIIK_10940	0.31	-0.5
2,343,415	+		OKGIIK_10940	0.31	-0.8
2,343,415	+		OKGIIK_10940	0.31	+0.0
2,343,415	+		OKGIIK_10940	0.31	-1.9
2,343,416	-		OKGIIK_10940	0.31	+0.6
2,343,416	-		OKGIIK_10940	0.31	+0.1
2,343,416	-		OKGIIK_10940	0.31	+1.3
2,343,416	-		OKGIIK_10940	0.31	+0.2
2,343,416	-		OKGIIK_10940	0.31	-1.0
2,343,416	-		OKGIIK_10940	0.31	-2.1
2,343,416	-		OKGIIK_10940	0.31	+0.9
2,343,416	-		OKGIIK_10940	0.31	-0.7
2,343,416	-		OKGIIK_10940	0.31	+1.3
2,343,416	-		OKGIIK_10940	0.31	+1.0
2,343,416	-		OKGIIK_10940	0.31	-1.4
2,343,619	+		OKGIIK_10940	0.46	+1.0
2,343,619	+		OKGIIK_10940	0.46	+0.0
2,343,619	+		OKGIIK_10940	0.46	-0.7
2,343,620	-		OKGIIK_10940	0.46	-0.7
2,343,620	-		OKGIIK_10940	0.46	-1.7
2,343,620	-		OKGIIK_10940	0.46	-0.3
2,343,620	-		OKGIIK_10940	0.46	-1.0
2,343,620	-		OKGIIK_10940	0.46	+0.4
2,343,620	-		OKGIIK_10940	0.46	+1.3
2,343,620	-		OKGIIK_10940	0.46	+2.7
2,343,620	-		OKGIIK_10940	0.46	+0.4
2,343,620	-		OKGIIK_10940	0.46	-0.5
2,343,620	-		OKGIIK_10940	0.46	+0.0
2,343,620	-		OKGIIK_10940	0.46	-0.4
2,343,620	-		OKGIIK_10940	0.46	+0.3
2,343,620	-		OKGIIK_10940	0.46	-0.8
2,343,620	-		OKGIIK_10940	0.46	+0.3
2,343,620	-		OKGIIK_10940	0.46	-0.7
2,343,620	-		OKGIIK_10940	0.46	-0.7
2,343,620	-		OKGIIK_10940	0.46	-0.8
2,343,620	-		OKGIIK_10940	0.46	+0.0
2,343,649	+		OKGIIK_10940	0.48	-1.0
2,343,649	+		OKGIIK_10940	0.48	-0.8
2,343,650	-		OKGIIK_10940	0.48	+0.3
2,343,650	-		OKGIIK_10940	0.48	-1.0
2,343,650	-		OKGIIK_10940	0.48	+1.2
2,343,650	-		OKGIIK_10940	0.48	+0.3
2,343,760	+		OKGIIK_10940	0.57	-0.1
2,343,760	+		OKGIIK_10940	0.57	+1.3
2,343,760	+		OKGIIK_10940	0.57	+0.3
2,343,760	+		OKGIIK_10940	0.57	+0.1
2,343,760	+		OKGIIK_10940	0.57	+1.8
2,343,761	-		OKGIIK_10940	0.57	-0.2
2,343,761	-		OKGIIK_10940	0.57	-0.9
2,343,761	-		OKGIIK_10940	0.57	+0.0
2,343,761	-		OKGIIK_10940	0.57	+0.6
2,343,802	+		OKGIIK_10940	0.60	+0.2
2,343,802	+		OKGIIK_10940	0.60	+1.0
2,343,802	+		OKGIIK_10940	0.60	+0.3
2,343,802	+		OKGIIK_10940	0.60	+0.5
2,343,802	+		OKGIIK_10940	0.60	-0.3
2,343,802	+		OKGIIK_10940	0.60	+1.3
2,343,802	+		OKGIIK_10940	0.60	+0.3
2,343,802	+		OKGIIK_10940	0.60	+1.3
2,343,802	+		OKGIIK_10940	0.60	+1.5
2,343,803	-		OKGIIK_10940	0.60	+0.0
2,343,803	-		OKGIIK_10940	0.60	-0.4
2,343,803	-		OKGIIK_10940	0.60	-2.0
2,343,803	-		OKGIIK_10940	0.60	-1.7
2,343,803	-		OKGIIK_10940	0.60	-0.2
2,344,277	+				+2.3
2,344,388	+				-0.5
2,344,388	+				+0.7
2,344,389	-				-2.0
2,344,389	-				+2.0
2,344,829	+		OKGIIK_10945	0.43	+0.2
2,344,829	+		OKGIIK_10945	0.43	+1.1
2,344,829	+		OKGIIK_10945	0.43	+1.3
2,344,829	+		OKGIIK_10945	0.43	-0.2
2,344,829	+		OKGIIK_10945	0.43	+1.2
2,344,829	+		OKGIIK_10945	0.43	+1.3
2,344,829	+		OKGIIK_10945	0.43	+1.3
2,344,829	+		OKGIIK_10945	0.43	+1.9
2,344,829	+		OKGIIK_10945	0.43	-0.7
2,344,830	-		OKGIIK_10945	0.43	-0.6
2,344,830	-		OKGIIK_10945	0.43	+1.3
2,344,830	-		OKGIIK_10945	0.43	+0.4
2,344,830	-		OKGIIK_10945	0.43	+0.7
2,344,830	-		OKGIIK_10945	0.43	+1.1
2,344,830	-		OKGIIK_10945	0.43	+1.3
2,344,830	-		OKGIIK_10945	0.43	+0.9
2,344,830	-		OKGIIK_10945	0.43	+1.5
2,344,830	-		OKGIIK_10945	0.43	+0.4
2,344,830	-		OKGIIK_10945	0.43	+1.0
2,344,830	-		OKGIIK_10945	0.43	+0.0
2,344,830	-		OKGIIK_10945	0.43	+2.1
2,344,830	-		OKGIIK_10945	0.43	+0.5
2,345,055	-		OKGIIK_10945	0.65	+0.9
2,345,294	+		OKGIIK_10945	0.89	+1.0
2,345,295	-		OKGIIK_10945	0.89	+1.0
2,345,295	-		OKGIIK_10945	0.89	-0.5
2,345,295	-		OKGIIK_10945	0.89	+0.6
2,345,295	-		OKGIIK_10945	0.89	-0.1
2,345,318	-				+1.5
2,345,374	+				+0.9
2,345,374	+				-0.7
2,345,374	+				+0.9
2,345,374	+				+1.3
2,345,374	+				-0.7
2,345,375	-				+0.3
2,345,375	-				+2.3
2,345,375	-				+1.3
2,345,375	-				-1.1
2,345,375	-				-0.1
2,345,375	-				+1.0
2,345,375	-				-0.4
2,345,375	-				-0.7
2,345,375	-				+0.9
2,345,375	-				-0.2
2,345,375	-				+0.9
2,345,375	-				-1.4
2,345,375	-				+0.3
2,345,375	-				+1.1
2,345,375	-				-1.0
2,345,375	-				+1.0
2,345,410	+				+0.5
2,345,410	+				+0.6
2,345,410	+				-1.2
2,345,410	+				-0.4
2,345,410	+				+0.3
2,345,410	+				-1.1
2,345,410	+				+0.8
2,345,410	+				+1.3
2,345,410	+				-0.7
2,345,410	+				-0.5
2,345,410	+				+1.2
2,345,410	+				-0.5
2,345,410	+				+0.6
2,345,410	+				+0.0
2,345,410	+				+0.1
2,345,410	+				+1.3
2,345,410	+				+0.9
2,345,410	+				+0.8
2,345,410	+				+1.9
2,345,411	-				-1.1
2,345,411	-				-0.5
2,345,411	-				+0.3
2,345,411	-				-0.9
2,345,411	-				+0.0
2,345,411	-				-1.1
2,345,411	-				+0.1
2,345,411	-				+0.6
2,345,411	-				-1.4
2,345,411	-				+2.3
2,345,411	-				-0.7
2,345,411	-				+1.8
2,345,411	-				+0.6
2,345,411	-				-0.7
2,345,411	-				+0.3
2,345,411	-				+0.3
2,345,411	-				-1.8
2,345,411	-				-0.7
2,345,504	+				-0.7
2,345,505	+				-1.2
2,345,505	+				-0.8
2,345,505	+				-0.6
2,345,505	+				-1.7
2,345,505	+				-0.2
2,345,505	+				+0.2
2,345,505	+				+1.2
2,345,505	+				-0.2
2,345,505	+				+0.0
2,345,505	+				-0.5
2,345,505	+				+0.9
2,345,505	+				-1.2
2,345,505	+				-1.6
2,345,505	+				+1.0
2,345,505	+				-2.1
2,345,505	+				+0.5
2,345,505	+				-0.7
2,345,505	+				+1.2
2,345,505	+				+0.5
2,345,505	+				-1.6
2,345,505	+				+2.0
2,345,505	+				+0.4
2,345,505	+				+1.3
2,345,505	+				-1.0
2,345,505	+				-2.4
2,345,506	-				-0.6
2,345,506	-				+0.0
2,345,506	-				-1.2
2,345,506	-				-1.1
2,345,506	-				-1.0
2,345,506	-				+0.5
2,345,506	-				+1.3
2,345,506	-				-1.0
2,345,506	-				-0.2
2,345,506	-				-2.1
2,345,506	-				-0.5
2,345,506	-				+0.3
2,345,506	-				-0.2
2,345,506	-				-1.0
2,345,506	-				-0.2
2,345,506	-				+2.1
2,345,506	-				-0.8
2,345,506	-				+0.0
2,345,506	-				+0.5
2,345,506	-				+0.9
2,345,506	-				-0.2
2,345,506	-				-0.8
2,345,506	-				+0.3
2,345,506	-				-0.5
2,345,506	-				+0.7
2,345,509	+	ompR	OKGIIK_10950	0.10	+0.6
2,345,509	+	ompR	OKGIIK_10950	0.10	-0.2
2,345,509	+	ompR	OKGIIK_10950	0.10	+0.3
2,345,509	+	ompR	OKGIIK_10950	0.10	-0.8
2,345,509	+	ompR	OKGIIK_10950	0.10	-0.4
2,345,509	+	ompR	OKGIIK_10950	0.10	-0.5
2,345,509	+	ompR	OKGIIK_10950	0.10	-0.5
2,345,509	+	ompR	OKGIIK_10950	0.10	-0.2
2,345,509	+	ompR	OKGIIK_10950	0.10	-0.3
2,345,509	+	ompR	OKGIIK_10950	0.10	+0.0
2,345,509	+	ompR	OKGIIK_10950	0.10	-1.1
2,345,509	+	ompR	OKGIIK_10950	0.10	-2.0
2,345,510	-	ompR	OKGIIK_10950	0.10	-1.5
2,345,510	-	ompR	OKGIIK_10950	0.10	-1.7
2,345,510	-	ompR	OKGIIK_10950	0.10	+0.0
2,345,510	-	ompR	OKGIIK_10950	0.10	+0.3
2,345,510	-	ompR	OKGIIK_10950	0.10	-1.0
2,345,510	-	ompR	OKGIIK_10950	0.10	-0.1
2,345,510	-	ompR	OKGIIK_10950	0.10	-1.2
2,345,510	-	ompR	OKGIIK_10950	0.10	+0.0
2,345,510	-	ompR	OKGIIK_10950	0.10	-1.2
2,345,510	-	ompR	OKGIIK_10950	0.10	-3.1
2,345,510	-	ompR	OKGIIK_10950	0.10	+0.0
2,345,510	-	ompR	OKGIIK_10950	0.10	-0.5
2,345,510	-	ompR	OKGIIK_10950	0.10	-0.2
2,345,510	-	ompR	OKGIIK_10950	0.10	-1.5
2,345,510	-	ompR	OKGIIK_10950	0.10	-2.2
2,345,510	-	ompR	OKGIIK_10950	0.10	-0.2
2,345,510	-	ompR	OKGIIK_10950	0.10	+0.2
2,345,510	-	ompR	OKGIIK_10950	0.10	+0.0
2,345,555	+	ompR	OKGIIK_10950	0.17	+0.2
2,345,555	+	ompR	OKGIIK_10950	0.17	-0.5
2,345,555	+	ompR	OKGIIK_10950	0.17	+0.3
2,345,555	+	ompR	OKGIIK_10950	0.17	+0.0
2,345,555	+	ompR	OKGIIK_10950	0.17	-0.2
2,345,555	+	ompR	OKGIIK_10950	0.17	+1.3
2,345,555	+	ompR	OKGIIK_10950	0.17	+1.9
2,345,555	+	ompR	OKGIIK_10950	0.17	+0.9
2,345,555	+	ompR	OKGIIK_10950	0.17	-1.5
2,345,555	+	ompR	OKGIIK_10950	0.17	-1.0
2,345,555	+	ompR	OKGIIK_10950	0.17	+0.5
2,345,556	-	ompR	OKGIIK_10950	0.17	-1.1
2,345,556	-	ompR	OKGIIK_10950	0.17	+0.8
2,345,556	-	ompR	OKGIIK_10950	0.17	-0.7
2,345,556	-	ompR	OKGIIK_10950	0.17	+0.3
2,345,556	-	ompR	OKGIIK_10950	0.17	-1.1
2,345,556	-	ompR	OKGIIK_10950	0.17	-0.6
2,345,556	-	ompR	OKGIIK_10950	0.17	+1.9
2,345,556	-	ompR	OKGIIK_10950	0.17	-0.5
2,345,556	-	ompR	OKGIIK_10950	0.17	-1.2
2,345,556	-	ompR	OKGIIK_10950	0.17	-0.7
2,345,556	-	ompR	OKGIIK_10950	0.17	+0.0
2,345,556	-	ompR	OKGIIK_10950	0.17	+0.0
2,345,556	-	ompR	OKGIIK_10950	0.17	-1.8
2,345,556	-	ompR	OKGIIK_10950	0.17	+1.0
2,345,556	-	ompR	OKGIIK_10950	0.17	-0.5
2,345,592	+	ompR	OKGIIK_10950	0.22	-1.4
2,345,593	-	ompR	OKGIIK_10950	0.22	-1.4
2,345,593	-	ompR	OKGIIK_10950	0.22	-0.5
2,345,846	+	ompR	OKGIIK_10950	0.56	+0.3
2,345,846	+	ompR	OKGIIK_10950	0.56	-1.1
2,345,846	+	ompR	OKGIIK_10950	0.56	+0.2
2,345,846	+	ompR	OKGIIK_10950	0.56	-0.6
2,345,846	+	ompR	OKGIIK_10950	0.56	-1.4
2,345,847	-	ompR	OKGIIK_10950	0.56	-0.8
2,345,847	-	ompR	OKGIIK_10950	0.56	+1.0
2,345,847	-	ompR	OKGIIK_10950	0.56	-1.2
2,345,911	+	ompR	OKGIIK_10950	0.65	-0.1
2,345,911	+	ompR	OKGIIK_10950	0.65	-0.7
2,345,911	+	ompR	OKGIIK_10950	0.65	+0.0
2,345,911	+	ompR	OKGIIK_10950	0.65	-2.1
2,345,912	-	ompR	OKGIIK_10950	0.65	-1.7
2,345,912	-	ompR	OKGIIK_10950	0.65	-1.0
2,346,008	+	ompR	OKGIIK_10950	0.78	+1.3
2,346,008	+	ompR	OKGIIK_10950	0.78	-1.5
2,346,008	+	ompR	OKGIIK_10950	0.78	+2.1
2,346,008	+	ompR	OKGIIK_10950	0.78	-2.1
2,346,008	+	ompR	OKGIIK_10950	0.78	-0.4
2,346,008	+	ompR	OKGIIK_10950	0.78	-1.0
2,346,008	+	ompR	OKGIIK_10950	0.78	+0.3
2,346,009	-	ompR	OKGIIK_10950	0.79	-1.8
2,346,009	-	ompR	OKGIIK_10950	0.79	-1.1
2,346,009	-	ompR	OKGIIK_10950	0.79	+0.3
2,346,009	-	ompR	OKGIIK_10950	0.79	+1.0
2,346,009	-	ompR	OKGIIK_10950	0.79	-1.6
2,346,009	-	ompR	OKGIIK_10950	0.79	-0.8
2,346,009	-	ompR	OKGIIK_10950	0.79	-1.5
2,346,056	+	ompR	OKGIIK_10950	0.85	+0.3
2,346,056	+	ompR	OKGIIK_10950	0.85	-0.8
2,346,056	+	ompR	OKGIIK_10950	0.85	+1.3
2,346,057	-	ompR	OKGIIK_10950	0.85	-0.6
2,346,057	-	ompR	OKGIIK_10950	0.85	-0.9
2,346,057	-	ompR	OKGIIK_10950	0.85	+2.1
2,346,057	-	ompR	OKGIIK_10950	0.85	-1.6
2,346,057	-	ompR	OKGIIK_10950	0.85	+0.0
2,346,068	+	ompR	OKGIIK_10950	0.87	+0.5
2,346,157	+				+0.0
2,346,157	+				-1.1
2,346,157	+				-2.2
2,346,157	+				+0.3
2,346,157	+				+0.6
2,346,157	+				-1.1
2,346,157	+				-0.7
2,346,157	+				-1.0
2,346,157	+				+0.3
2,346,157	+				+0.3
2,346,157	+				+0.3
2,346,157	+				+0.3
2,346,157	+				-3.3
2,346,158	-				-0.4
2,346,158	-				-1.4
2,346,158	-				-0.2
2,346,158	-				-0.2
2,346,158	-				+0.1
2,346,158	-				+0.1
2,346,158	-				-0.5
2,346,158	-				-0.2
2,346,158	-				-2.8
2,346,158	-				-0.5
2,346,158	-				-1.5
2,346,158	-				-1.0
2,346,158	-				+1.0
2,346,158	-				-0.8
2,346,158	-				+1.0
2,346,158	-				-0.7
2,346,158	-				+0.3
2,346,158	-				+0.5
2,346,158	-				-0.5
2,346,158	-				+0.3
2,346,158	-				-0.8
2,346,158	-				+0.0
2,346,158	-				-1.2
2,346,158	-				-0.7
2,346,158	-				-0.8
2,346,158	-				+1.3
2,346,172	+				+0.5
2,346,172	+				-1.2
2,346,172	+				-1.4
2,346,172	+				-0.5
2,346,172	+				+0.5
2,346,173	-				+2.1
2,346,173	-				-0.8
2,346,190	+				+0.3
2,346,190	+				-1.0
2,346,190	+				-0.3
2,346,190	+				-1.5
2,346,190	+				+1.1
2,346,190	+				+0.0
2,346,190	+				+0.8
2,346,190	+				-1.4
2,346,190	+				-0.4
2,346,191	-				+0.0
2,346,191	-				+0.1
2,346,191	-				-1.4
2,346,191	-				-0.2
2,346,191	-				+0.0
2,346,191	-				-0.2
2,346,191	-				+0.9
2,346,191	-				+0.0
2,346,191	-				-0.7
2,346,191	-				+0.0
2,346,191	-				-2.1
2,346,191	-				-0.2
2,346,191	-				+1.2
2,346,191	-				+1.0
2,346,191	-				-0.5
2,346,191	-				+0.9
2,346,191	-				-0.2
2,346,191	-				-1.8
2,346,203	-				+0.3
2,346,203	-				+0.8
2,346,203	-				+0.1
2,346,211	+				-0.7
2,346,211	+				+1.9
2,346,211	+				+1.1
2,346,212	-				+0.0
2,346,212	-				-1.2
2,346,212	-				-0.1
2,346,267	-				+1.0
2,346,267	-				+1.3
2,346,267	-				-0.2
2,346,295	+				-0.2
2,346,296	-				-0.8
2,346,296	-				+1.8