Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_10845

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,322,892	+				+0.3
2,322,896	+				+1.1
2,322,896	+				-1.2
2,322,896	+				+0.1
2,322,896	+				+0.6
2,322,897	-				+0.0
2,322,897	-				+1.1
2,322,897	-				-0.2
2,322,897	-				+1.0
2,322,897	-				+0.0
2,322,897	-				+0.0
2,322,920	-				-0.3
2,322,920	-				+0.8
2,322,960	+				-0.5
2,322,960	+				-0.2
2,322,960	+				+0.2
2,322,960	+				-0.4
2,322,960	+				+0.7
2,322,960	+				+0.1
2,322,960	+				-0.5
2,322,960	+				+0.8
2,322,961	-				-1.0
2,322,961	-				-0.2
2,322,961	-				-1.5
2,322,961	-				+0.2
2,322,961	-				-0.3
2,322,961	-				+0.0
2,322,961	-				-1.0
2,322,961	-				-0.0
2,322,961	-				+0.9
2,322,961	-				+1.6
2,322,992	+				-0.7
2,322,992	+				-0.8
2,322,992	+				-0.3
2,322,992	+				-1.2
2,322,992	+				-1.1
2,322,993	-				-0.4
2,322,993	-				+0.9
2,322,993	-				-1.2
2,322,993	-				-0.4
2,322,993	-				-2.1
2,322,993	-				+0.0
2,322,993	-				+1.3
2,322,993	-				-1.0
2,322,993	-				-0.5
2,323,007	+				+0.0
2,323,007	+				-1.0
2,323,007	+				-1.5
2,323,007	+				-1.1
2,323,007	+				-0.9
2,323,007	+				-0.8
2,323,007	+				+0.9
2,323,007	+				+0.6
2,323,008	-				+0.2
2,323,008	-				+1.1
2,323,008	-				+0.6
2,323,008	-				+0.8
2,323,028	+				+1.5
2,323,028	+				-0.7
2,323,029	-				-1.0
2,323,029	-				-1.0
2,323,039	+				-0.4
2,323,039	+				+0.2
2,323,039	+				+1.3
2,323,040	-				-1.0
2,323,040	-				+0.9
2,323,074	-				+0.3
2,323,125	+				+0.2
2,323,125	+				-0.9
2,323,125	+				+0.6
2,323,125	+				-0.2
2,323,125	+				-1.4
2,323,125	+				-0.3
2,323,125	+				+0.4
2,323,125	+				+0.2
2,323,125	+				-1.4
2,323,125	+				-1.4
2,323,125	+				-0.8
2,323,125	+				+2.0
2,323,125	+				-0.1
2,323,125	+				-0.5
2,323,125	+				-1.2
2,323,125	+				-1.4
2,323,126	-				+1.6
2,323,126	-				+2.3
2,323,126	-				-0.7
2,323,126	-				-1.0
2,323,126	-				+0.8
2,323,126	-				-0.2
2,323,126	-				+0.1
2,323,126	-				-1.5
2,323,126	-				-0.7
2,323,126	-				-0.2
2,323,126	-				-0.2
2,323,126	-				-0.0
2,323,126	-				-0.5
2,323,126	-				+0.2
2,323,126	-				-0.2
2,323,126	-				-0.8
2,323,126	-				+0.2
2,323,126	-				+2.1
2,323,126	-				+2.0
2,323,126	-				-1.7
2,323,155	+				+0.0
2,323,155	+				-1.2
2,323,155	+				-0.7
2,323,155	+				-0.2
2,323,155	+				+0.5
2,323,155	+				+0.3
2,323,156	-				+0.3
2,323,156	-				-0.7
2,323,156	-				-0.5
2,323,243	+				-1.7
2,323,243	+				+0.0
2,323,243	+				+0.6
2,323,244	-				-0.2
2,323,244	-				+1.0
2,323,244	-				-0.3
2,323,255	+				-1.1
2,323,255	+				+0.5
2,323,255	+				-0.7
2,323,255	+				+0.3
2,323,255	+				-1.2
2,323,255	+				+0.2
2,323,255	+				+0.0
2,323,256	-				+0.3
2,323,256	-				-0.2
2,323,256	-				+0.3
2,323,256	-				-1.1
2,323,256	-				-0.2
2,323,256	-				+0.5
2,323,256	-				-1.1
2,323,256	-				+0.5
2,323,370	+		OKGIIK_10840	0.25	-0.2
2,323,370	+		OKGIIK_10840	0.25	-1.4
2,323,377	+		OKGIIK_10840	0.26	+0.2
2,323,488	+		OKGIIK_10840	0.57	+0.5
2,323,488	+		OKGIIK_10840	0.57	-0.9
2,323,488	+		OKGIIK_10840	0.57	+0.3
2,323,488	+		OKGIIK_10840	0.57	-0.9
2,323,488	+		OKGIIK_10840	0.57	-1.4
2,323,488	+		OKGIIK_10840	0.57	+2.3
2,323,488	+		OKGIIK_10840	0.57	-1.3
2,323,489	-		OKGIIK_10840	0.57	-0.5
2,323,489	-		OKGIIK_10840	0.57	+1.3
2,323,489	-		OKGIIK_10840	0.57	+0.5
2,323,489	-		OKGIIK_10840	0.57	-0.2
2,323,489	-		OKGIIK_10840	0.57	+0.8
2,323,489	-		OKGIIK_10840	0.57	-0.5
2,323,489	-		OKGIIK_10840	0.57	-0.1
2,323,489	-		OKGIIK_10840	0.57	-0.5
2,323,497	+		OKGIIK_10840	0.60	-0.2
2,323,497	+		OKGIIK_10840	0.60	-0.5
2,323,497	+		OKGIIK_10840	0.60	-1.6
2,323,497	+		OKGIIK_10840	0.60	+3.2
2,323,497	+		OKGIIK_10840	0.60	-0.7
2,323,497	+		OKGIIK_10840	0.60	+0.1
2,323,497	+		OKGIIK_10840	0.60	+1.6
2,323,497	+		OKGIIK_10840	0.60	+0.3
2,323,498	-		OKGIIK_10840	0.60	+0.3
2,323,498	-		OKGIIK_10840	0.60	-0.3
2,323,498	-		OKGIIK_10840	0.60	-0.2
2,323,498	-		OKGIIK_10840	0.60	+0.3
2,323,498	-		OKGIIK_10840	0.60	+0.2
2,323,498	-		OKGIIK_10840	0.60	+0.3
2,323,498	-		OKGIIK_10840	0.60	-0.7
2,323,498	-		OKGIIK_10840	0.60	+0.1
2,323,498	-		OKGIIK_10840	0.60	+0.1
2,323,518	+		OKGIIK_10840	0.65	-0.7
2,323,518	+		OKGIIK_10840	0.65	+0.5
2,323,519	-		OKGIIK_10840	0.66	-0.0
2,323,519	-		OKGIIK_10840	0.66	+1.0
2,323,519	-		OKGIIK_10840	0.66	+0.5
2,323,519	-		OKGIIK_10840	0.66	+1.0
2,323,545	+		OKGIIK_10840	0.73	+0.8
2,323,546	-		OKGIIK_10840	0.73	+0.3
2,323,581	+		OKGIIK_10840	0.83	-1.6
2,323,581	+		OKGIIK_10840	0.83	-0.8
2,323,581	+		OKGIIK_10840	0.83	-1.9
2,323,581	+		OKGIIK_10840	0.83	+0.9
2,323,581	+		OKGIIK_10840	0.83	-0.5
2,323,581	+		OKGIIK_10840	0.83	+0.2
2,323,581	-		OKGIIK_10840	0.83	-0.6
2,323,582	-		OKGIIK_10840	0.83	+0.3
2,323,582	-		OKGIIK_10840	0.83	-1.7
2,323,582	-		OKGIIK_10840	0.83	-1.7
2,323,582	-		OKGIIK_10840	0.83	+0.3
2,323,582	-		OKGIIK_10840	0.83	-1.0
2,323,582	-		OKGIIK_10840	0.83	+1.3
2,323,582	-		OKGIIK_10840	0.83	+0.5
2,323,582	-		OKGIIK_10840	0.83	-1.7
2,323,582	-		OKGIIK_10840	0.83	+0.8
2,323,582	-		OKGIIK_10840	0.83	-1.0
2,323,673	+				+2.1
2,323,673	+				-0.7
2,323,673	+				-0.8
2,323,674	-				+0.0
2,323,674	-				-1.4
2,323,674	-				-0.5
2,323,821	+				-0.8
2,323,821	+				-0.9
2,323,821	+				-0.5
2,323,821	+				-1.1
2,323,821	+				+1.2
2,323,822	-				+0.5
2,323,822	-				-1.7
2,324,252	+		OKGIIK_10845	0.54	-0.5
2,324,252	+		OKGIIK_10845	0.54	+0.3
2,324,252	+		OKGIIK_10845	0.54	+0.8
2,324,253	-		OKGIIK_10845	0.54	-0.0
2,324,253	-		OKGIIK_10845	0.54	-1.2
2,324,253	-		OKGIIK_10845	0.54	+0.0
2,324,253	-		OKGIIK_10845	0.54	-0.2
2,324,253	-		OKGIIK_10845	0.54	+1.7
2,324,253	-		OKGIIK_10845	0.54	-0.1
2,325,172	-				-0.8
2,325,248	-				-0.5
2,325,250	+				-0.1
2,325,250	+				-1.7
2,325,250	+				-1.5
2,325,250	+				+0.3
2,325,251	-				+1.9
2,325,251	-				+0.8
2,325,251	-				+0.1
2,325,284	+				+0.0
2,325,284	+				-1.1
2,325,284	+				+1.3
2,325,284	+				+0.0
2,325,284	+				+1.9
2,325,284	+				-1.1
2,325,284	+				-2.5
2,325,284	+				+0.3
2,325,284	+				-2.7
2,325,284	+				+0.0
2,325,284	+				-0.0
2,325,285	-				-1.2
2,325,285	-				-0.7
2,325,285	-				-0.2