Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_10670

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,287,916	+				+0.0
2,287,917	-				-0.2
2,287,921	+				-0.1
2,287,921	+				+1.2
2,287,921	+				+1.0
2,287,921	+				+0.8
2,287,921	+				-0.7
2,287,921	+				+1.2
2,287,921	+				+0.8
2,287,921	+				+0.3
2,287,921	+				+0.0
2,287,922	-				-0.5
2,287,922	-				-1.9
2,287,922	-				+0.3
2,287,922	-				+0.0
2,287,922	-				-0.2
2,287,922	-				-0.2
2,287,922	-				-0.2
2,287,946	+				-0.2
2,287,946	+				-0.9
2,287,946	+				+0.0
2,287,946	+				-0.4
2,287,946	+				+0.9
2,287,946	+				-0.2
2,287,946	+				-1.8
2,287,946	+				-0.2
2,287,947	-				+0.0
2,287,947	-				+0.8
2,287,947	-				-0.6
2,287,947	-				+0.4
2,287,947	-				-1.5
2,287,947	-				+0.3
2,287,947	-				+1.1
2,287,947	-				-2.0
2,287,947	-				-0.5
2,287,947	-				-1.4
2,287,947	-				+0.2
2,287,959	+				+0.3
2,287,959	+				+0.0
2,287,959	+				-0.2
2,287,959	+				-0.8
2,287,959	+				+1.6
2,288,024	+				-0.4
2,288,025	-				+0.9
2,288,075	+				+0.9
2,288,075	+				+1.1
2,288,075	+				-2.0
2,288,076	-				-2.1
2,288,076	-				-1.1
2,288,076	-				-1.1
2,288,076	-				+1.5
2,288,694	+				+1.9
2,288,694	+				-0.8
2,288,694	+				+0.8
2,288,694	+				-1.1
2,288,694	+				+0.3
2,288,695	-				+1.5
2,288,695	-				+0.0
2,288,695	-				-0.8
2,288,695	-				+0.1
2,288,695	-				+1.6
2,288,695	-				+1.5
2,288,695	-				-0.5
2,288,695	-				+0.5
2,288,732	+				-0.5
2,288,732	+				+1.9
2,288,733	-				-1.5
2,288,733	-				+0.0
2,288,733	-				-1.0
2,288,733	-				+1.6
2,288,733	-				-1.5
2,288,733	-				-0.4
2,288,733	-				-0.7
2,288,733	-				-0.5
2,288,733	-				+0.8
2,288,733	-				-2.5
2,288,736	-				-0.4
2,288,736	-				-0.1
2,288,736	-				+0.2
2,288,736	-				+0.2
2,288,736	-				-1.5
2,288,830	+				+0.0
2,288,830	+				-0.1
2,288,830	+				-1.2
2,288,830	+				+1.6
2,288,830	+				-0.5
2,288,830	+				-0.5
2,288,830	+				+0.5
2,288,831	-				+0.3
2,288,831	-				-0.7
2,288,831	-				+0.8
2,288,831	-				+0.0
2,288,831	-				+0.3
2,288,831	-				-0.2
2,288,911	+				+0.0
2,288,911	+				+0.1
2,288,911	+				+1.5
2,288,911	+				-1.5
2,288,911	+				+1.6
2,288,912	-				+0.0
2,288,912	-				-0.5
2,288,912	-				+0.5
2,288,912	-				-1.2
2,288,916	+				+1.9
2,288,917	-				+0.1
2,288,917	-				+0.5
2,288,917	-				+0.6
2,288,996	+		OKGIIK_10670	0.23	+1.0
2,288,996	+		OKGIIK_10670	0.23	-0.2
2,288,996	+		OKGIIK_10670	0.23	-1.4
2,288,997	-		OKGIIK_10670	0.23	+1.9
2,288,997	-		OKGIIK_10670	0.23	+0.3
2,288,997	-		OKGIIK_10670	0.23	+0.9
2,288,997	-		OKGIIK_10670	0.23	+0.3
2,288,997	-		OKGIIK_10670	0.23	+1.0
2,288,997	-		OKGIIK_10670	0.23	-0.1
2,289,131	+		OKGIIK_10670	0.54	-0.1
2,289,131	+		OKGIIK_10670	0.54	-0.2
2,289,131	+		OKGIIK_10670	0.54	+0.1
2,289,131	+		OKGIIK_10670	0.54	+1.4
2,289,131	+		OKGIIK_10670	0.54	-0.5
2,289,131	+		OKGIIK_10670	0.54	+0.9
2,289,131	+		OKGIIK_10670	0.54	+0.0
2,289,488	+				+1.2
2,289,568	+				-0.7
2,289,569	-				+1.1
2,289,569	-				-1.0
2,289,592	+				+1.2
2,289,592	+				+1.7
2,289,592	+				+1.2
2,289,592	+				-0.4
2,289,592	+				+0.7
2,289,593	-				-0.4
2,289,593	-				+0.5
2,289,593	-				+1.2
2,289,593	-				+0.2
2,289,593	-				+1.1
2,289,691	+	pntB	OKGIIK_10675	0.13	-1.7
2,289,691	+	pntB	OKGIIK_10675	0.13	+0.6
2,289,691	+	pntB	OKGIIK_10675	0.13	+1.3
2,289,691	+	pntB	OKGIIK_10675	0.13	+0.6
2,289,691	+	pntB	OKGIIK_10675	0.13	+0.0
2,289,691	+	pntB	OKGIIK_10675	0.13	+0.3
2,289,692	-	pntB	OKGIIK_10675	0.13	+1.1
2,289,692	-	pntB	OKGIIK_10675	0.13	+1.9
2,289,692	-	pntB	OKGIIK_10675	0.13	-0.8
2,289,692	-	pntB	OKGIIK_10675	0.13	-1.6
2,289,692	-	pntB	OKGIIK_10675	0.13	-1.7
2,289,692	-	pntB	OKGIIK_10675	0.13	+0.0
2,289,814	+	pntB	OKGIIK_10675	0.21	+0.2
2,289,814	+	pntB	OKGIIK_10675	0.21	-0.5
2,289,815	-	pntB	OKGIIK_10675	0.21	+0.0
2,289,815	-	pntB	OKGIIK_10675	0.21	-0.6
2,289,997	+	pntB	OKGIIK_10675	0.34	-1.1
2,290,107	-	pntB	OKGIIK_10675	0.41	-0.2
2,290,243	+	pntB	OKGIIK_10675	0.50	+0.0
2,290,243	+	pntB	OKGIIK_10675	0.50	+0.2
2,290,243	+	pntB	OKGIIK_10675	0.50	-0.5
2,290,243	+	pntB	OKGIIK_10675	0.50	+1.9
2,290,243	+	pntB	OKGIIK_10675	0.50	+1.3
2,290,243	+	pntB	OKGIIK_10675	0.50	-2.0
2,290,243	+	pntB	OKGIIK_10675	0.50	+0.0
2,290,243	+	pntB	OKGIIK_10675	0.50	-2.1
2,290,243	+	pntB	OKGIIK_10675	0.50	+0.2
2,290,243	+	pntB	OKGIIK_10675	0.50	-0.6
2,290,243	+	pntB	OKGIIK_10675	0.50	+0.1
2,290,244	-	pntB	OKGIIK_10675	0.51	+0.8
2,290,244	-	pntB	OKGIIK_10675	0.51	-0.5
2,290,244	-	pntB	OKGIIK_10675	0.51	-0.8
2,290,244	-	pntB	OKGIIK_10675	0.51	-0.5
2,290,244	-	pntB	OKGIIK_10675	0.51	+0.3
2,290,244	-	pntB	OKGIIK_10675	0.51	+0.3
2,290,244	-	pntB	OKGIIK_10675	0.51	+1.0