Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_10615

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,277,982	-				+0.0
2,278,285	+	ppk2	OKGIIK_10615	0.29	+1.0
2,278,285	+	ppk2	OKGIIK_10615	0.29	+0.3
2,278,285	+	ppk2	OKGIIK_10615	0.29	+0.0
2,278,285	+	ppk2	OKGIIK_10615	0.29	+0.0
2,278,285	+	ppk2	OKGIIK_10615	0.29	+0.8
2,278,285	+	ppk2	OKGIIK_10615	0.29	-0.2
2,278,286	-	ppk2	OKGIIK_10615	0.29	+0.8
2,278,286	-	ppk2	OKGIIK_10615	0.29	-0.7
2,278,297	+	ppk2	OKGIIK_10615	0.31	-0.5
2,278,297	+	ppk2	OKGIIK_10615	0.31	+0.3
2,278,297	+	ppk2	OKGIIK_10615	0.31	+0.9
2,278,297	+	ppk2	OKGIIK_10615	0.31	+1.0
2,278,297	+	ppk2	OKGIIK_10615	0.31	+2.7
2,278,298	-	ppk2	OKGIIK_10615	0.31	-1.2
2,278,298	-	ppk2	OKGIIK_10615	0.31	-0.5
2,278,351	+	ppk2	OKGIIK_10615	0.38	-1.1
2,278,351	+	ppk2	OKGIIK_10615	0.38	-0.8
2,278,351	+	ppk2	OKGIIK_10615	0.38	+0.2
2,278,352	-	ppk2	OKGIIK_10615	0.38	+0.3
2,278,352	-	ppk2	OKGIIK_10615	0.38	-0.5
2,278,352	-	ppk2	OKGIIK_10615	0.38	+1.1
2,278,403	-	ppk2	OKGIIK_10615	0.44	-1.0
2,278,474	+	ppk2	OKGIIK_10615	0.54	-0.2
2,278,474	+	ppk2	OKGIIK_10615	0.54	+0.1
2,278,474	+	ppk2	OKGIIK_10615	0.54	+0.3
2,278,474	+	ppk2	OKGIIK_10615	0.54	+0.0
2,278,474	+	ppk2	OKGIIK_10615	0.54	+0.5
2,278,474	+	ppk2	OKGIIK_10615	0.54	+0.3
2,278,474	+	ppk2	OKGIIK_10615	0.54	+0.3
2,278,474	+	ppk2	OKGIIK_10615	0.54	+0.2
2,278,474	+	ppk2	OKGIIK_10615	0.54	+0.3
2,278,474	+	ppk2	OKGIIK_10615	0.54	+1.0
2,278,475	-	ppk2	OKGIIK_10615	0.54	+2.3
2,278,475	-	ppk2	OKGIIK_10615	0.54	-0.7
2,278,475	-	ppk2	OKGIIK_10615	0.54	+0.3
2,278,475	-	ppk2	OKGIIK_10615	0.54	+1.9
2,278,475	-	ppk2	OKGIIK_10615	0.54	-0.5
2,278,475	-	ppk2	OKGIIK_10615	0.54	+0.0
2,278,475	-	ppk2	OKGIIK_10615	0.54	-1.3
2,278,475	-	ppk2	OKGIIK_10615	0.54	-0.2
2,278,543	+	ppk2	OKGIIK_10615	0.63	+0.5
2,278,543	+	ppk2	OKGIIK_10615	0.63	-0.6
2,278,543	+	ppk2	OKGIIK_10615	0.63	+7.3
2,278,543	+	ppk2	OKGIIK_10615	0.63	-1.7
2,278,585	+	ppk2	OKGIIK_10615	0.68	-1.2
2,278,585	+	ppk2	OKGIIK_10615	0.68	+1.5
2,278,585	+	ppk2	OKGIIK_10615	0.68	+0.3
2,278,586	-	ppk2	OKGIIK_10615	0.68	-0.2
2,278,586	-	ppk2	OKGIIK_10615	0.68	-0.9
2,278,586	-	ppk2	OKGIIK_10615	0.68	+1.3
2,278,748	+	ppk2	OKGIIK_10615	0.90	-0.8
2,278,749	-	ppk2	OKGIIK_10615	0.90	-0.1
2,278,818	+				-0.5
2,278,818	+				-0.2
2,278,818	+				-0.8
2,278,818	+				-0.7
2,278,819	-				+0.2
2,278,819	-				-0.7
2,278,826	-				-1.6
2,279,041	+		OKGIIK_10620	0.81	+0.0
2,279,042	-		OKGIIK_10620	0.82	+0.3
2,279,098	+				-0.2
2,279,098	+				+0.3
2,279,099	-				+0.6
2,279,099	-				-1.1
2,279,099	-				+0.1
2,279,099	-				+6.0
2,279,157	+		OKGIIK_10625	0.11	-0.5
2,279,157	+		OKGIIK_10625	0.11	-1.2
2,279,157	+		OKGIIK_10625	0.11	-0.8
2,279,157	+		OKGIIK_10625	0.11	-0.8
2,279,157	+		OKGIIK_10625	0.11	-1.0
2,279,157	+		OKGIIK_10625	0.11	-1.0
2,279,157	+		OKGIIK_10625	0.11	-0.2
2,279,157	+		OKGIIK_10625	0.11	+1.0
2,279,158	-		OKGIIK_10625	0.11	+0.3
2,279,158	-		OKGIIK_10625	0.11	-1.5
2,279,158	-		OKGIIK_10625	0.11	+0.3
2,279,158	-		OKGIIK_10625	0.11	-0.8
2,279,158	-		OKGIIK_10625	0.11	-0.7
2,279,158	-		OKGIIK_10625	0.11	-0.2
2,279,158	-		OKGIIK_10625	0.11	+2.0
2,279,158	-		OKGIIK_10625	0.11	-1.8
2,279,158	-		OKGIIK_10625	0.11	-1.2
2,279,158	-		OKGIIK_10625	0.11	-2.5
2,279,158	-		OKGIIK_10625	0.11	-0.2
2,279,158	-		OKGIIK_10625	0.11	-2.0
2,279,192	+		OKGIIK_10625	0.18	-0.5
2,279,192	+		OKGIIK_10625	0.18	-0.8
2,279,192	+		OKGIIK_10625	0.18	-1.1
2,279,192	+		OKGIIK_10625	0.18	+0.1
2,279,192	+		OKGIIK_10625	0.18	-1.6
2,279,192	+		OKGIIK_10625	0.18	-0.2
2,279,192	+		OKGIIK_10625	0.18	+2.3
2,279,193	-		OKGIIK_10625	0.18	-1.1
2,279,193	-		OKGIIK_10625	0.18	-1.7
2,279,193	-		OKGIIK_10625	0.18	+0.3
2,279,193	-		OKGIIK_10625	0.18	-1.7
2,279,193	-		OKGIIK_10625	0.18	+0.3
2,279,193	-		OKGIIK_10625	0.18	+0.3
2,279,193	-		OKGIIK_10625	0.18	-0.2
2,279,193	-		OKGIIK_10625	0.18	-0.5
2,279,321	+		OKGIIK_10625	0.45	+0.3
2,279,321	+		OKGIIK_10625	0.45	-0.2
2,279,417	+		OKGIIK_10625	0.64	-1.0
2,279,417	+		OKGIIK_10625	0.64	+0.0
2,279,417	+		OKGIIK_10625	0.64	-2.1
2,279,417	+		OKGIIK_10625	0.64	+0.3
2,279,417	+		OKGIIK_10625	0.64	-1.2
2,279,417	+		OKGIIK_10625	0.64	-1.2
2,279,417	+		OKGIIK_10625	0.64	+0.8
2,279,418	-		OKGIIK_10625	0.65	-0.4
2,279,418	-		OKGIIK_10625	0.65	-1.8
2,279,418	-		OKGIIK_10625	0.65	-1.7
2,279,418	-		OKGIIK_10625	0.65	+0.3
2,279,418	-		OKGIIK_10625	0.65	+1.1
2,279,635	+				+0.3
2,279,635	+				-1.7
2,279,635	+				+0.3
2,279,635	+				-0.2
2,279,635	+				-0.2
2,279,636	-				-0.4
2,279,636	-				+0.0
2,279,636	-				-0.4
2,279,782	+		OKGIIK_10630	0.15	+0.0
2,279,782	+		OKGIIK_10630	0.15	+0.0
2,279,782	+		OKGIIK_10630	0.15	-0.8