Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_10540

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,265,335	-				-0.4
2,265,335	-				-2.1
2,265,335	-				-0.4
2,265,335	-				-0.6
2,265,335	-				-1.2
2,265,399	-				-2.4
2,265,399	-				+0.8
2,265,399	-				-1.4
2,265,399	-				+0.3
2,265,399	-				+0.4
2,265,468	-				-0.6
2,265,468	-				-1.8
2,265,468	-				+0.6
2,265,468	-				+1.0
2,265,468	-				-1.0
2,265,468	-				+0.4
2,265,468	-				-1.2
2,265,468	-				-0.1
2,265,468	-				+0.0
2,265,468	-				-1.4
2,265,468	-				-0.4
2,265,468	-				-1.7
2,265,468	-				-1.4
2,265,468	-				-1.2
2,265,468	-				+0.9
2,265,468	-				-0.7
2,265,468	-				-0.5
2,265,468	-				-1.8
2,265,468	-				-1.0
2,265,468	-				-1.6
2,265,468	-				-1.4
2,265,468	-				-0.7
2,265,468	-				-0.4
2,265,468	-				-0.4
2,265,468	-				+0.6
2,265,468	-				-1.5
2,265,468	-				-0.7
2,265,468	-				-2.1
2,265,468	-				-1.0
2,265,468	-				-0.4
2,265,657	-	tuf	OKGIIK_10540	0.16	-1.7
2,265,657	-	tuf	OKGIIK_10540	0.16	-1.4
2,265,657	-	tuf	OKGIIK_10540	0.16	-0.7
2,265,657	-	tuf	OKGIIK_10540	0.16	-0.4
2,265,691	-	tuf	OKGIIK_10540	0.19	+0.4
2,265,691	-	tuf	OKGIIK_10540	0.19	-1.8
2,265,691	-	tuf	OKGIIK_10540	0.19	-1.6
2,265,691	-	tuf	OKGIIK_10540	0.19	-1.7
2,265,691	-	tuf	OKGIIK_10540	0.19	-0.7
2,266,814	-				+0.8
2,266,814	-				-0.4
2,266,814	-				-1.5
2,266,814	-				+0.4
2,266,814	-				-2.4
2,266,814	-				-2.1
2,266,814	-				-0.4
2,266,814	-				-0.5
2,266,814	-				-1.0
2,266,814	-				-1.7
2,266,814	-				-1.7
2,266,814	-				-1.6
2,266,814	-				-1.7
2,266,939	-				-0.3
2,266,939	-				-1.0
2,266,939	-				-0.4
2,266,939	-				-0.7
2,266,939	-				-0.7
2,266,939	-				-1.5
2,266,939	-				-0.4
2,266,939	-				+0.0
2,267,293	-	yciA	OKGIIK_10560	0.16	-0.7
2,267,293	-	yciA	OKGIIK_10560	0.16	-0.4
2,267,293	-	yciA	OKGIIK_10560	0.16	-1.7
2,267,293	-	yciA	OKGIIK_10560	0.16	+0.8
2,267,293	-	yciA	OKGIIK_10560	0.16	-1.0
2,267,293	-	yciA	OKGIIK_10560	0.16	-0.2
2,267,293	-	yciA	OKGIIK_10560	0.16	+0.3
2,267,293	-	yciA	OKGIIK_10560	0.16	-0.5
2,267,293	-	yciA	OKGIIK_10560	0.16	+1.0
2,267,293	-	yciA	OKGIIK_10560	0.16	-3.0
2,267,560	+	yciA	OKGIIK_10560	0.70	-0.4
2,267,560	+	yciA	OKGIIK_10560	0.70	-0.1
2,267,560	+	yciA	OKGIIK_10560	0.70	+0.3
2,267,560	+	yciA	OKGIIK_10560	0.70	-0.2
2,267,560	+	yciA	OKGIIK_10560	0.70	-1.8
2,267,560	+	yciA	OKGIIK_10560	0.70	-1.0
2,267,560	+	yciA	OKGIIK_10560	0.70	-1.0
2,267,560	+	yciA	OKGIIK_10560	0.70	-1.0
2,267,561	-	yciA	OKGIIK_10560	0.70	+1.3
2,267,561	-	yciA	OKGIIK_10560	0.70	-1.2
2,267,561	-	yciA	OKGIIK_10560	0.70	-1.0
2,267,561	-	yciA	OKGIIK_10560	0.70	-1.8
2,267,561	-	yciA	OKGIIK_10560	0.70	+0.0
2,267,561	-	yciA	OKGIIK_10560	0.70	-0.4
2,267,561	-	yciA	OKGIIK_10560	0.70	+0.9
2,267,561	-	yciA	OKGIIK_10560	0.70	-1.5