Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_09975

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,152,101	+	iscR	OKGIIK_09970	0.74	-0.4
2,152,101	+	iscR	OKGIIK_09970	0.74	-0.7
2,152,102	-	iscR	OKGIIK_09970	0.74	-0.4
2,152,102	-	iscR	OKGIIK_09970	0.74	-1.6
2,152,102	-	iscR	OKGIIK_09970	0.74	-3.3
2,152,102	-	iscR	OKGIIK_09970	0.74	-1.4
2,152,102	-	iscR	OKGIIK_09970	0.74	-0.2
2,152,102	-	iscR	OKGIIK_09970	0.74	-2.4
2,152,102	-	iscR	OKGIIK_09970	0.74	-1.8
2,152,102	-	iscR	OKGIIK_09970	0.74	-1.4
2,152,102	-	iscR	OKGIIK_09970	0.74	+0.9
2,152,102	-	iscR	OKGIIK_09970	0.74	-0.7
2,152,199	-				-1.1
2,152,247	+				-1.2
2,152,248	-				-2.5
2,152,248	-				-1.2
2,152,248	-				-0.9
2,152,248	-				+0.4
2,152,248	-				-0.7
2,152,248	-				-1.7
2,152,248	-				-1.6
2,152,338	+				-2.3
2,152,338	+				-1.7
2,152,338	+				-0.3
2,152,338	+				-1.4
2,152,339	-				-1.3
2,152,339	-				-1.7
2,152,339	-				+0.2
2,152,339	-				-0.9
2,152,482	+		OKGIIK_09975	0.11	-2.0
2,152,482	+		OKGIIK_09975	0.11	+0.0
2,152,482	+		OKGIIK_09975	0.11	+1.2
2,152,483	-		OKGIIK_09975	0.11	+0.4
2,152,483	-		OKGIIK_09975	0.11	-1.4
2,152,483	-		OKGIIK_09975	0.11	-1.0
2,152,483	-		OKGIIK_09975	0.11	-1.2
2,152,668	+		OKGIIK_09975	0.29	-3.5
2,152,669	-		OKGIIK_09975	0.29	-2.2
2,152,669	-		OKGIIK_09975	0.29	-1.2
2,152,669	-		OKGIIK_09975	0.29	-1.2
2,152,669	-		OKGIIK_09975	0.29	-0.7
2,152,669	-		OKGIIK_09975	0.29	+1.9
2,152,707	+		OKGIIK_09975	0.33	-0.7
2,152,707	+		OKGIIK_09975	0.33	-1.0
2,152,707	+		OKGIIK_09975	0.33	-0.4
2,152,708	-		OKGIIK_09975	0.33	+0.3
2,152,773	+		OKGIIK_09975	0.40	+2.1
2,152,774	-		OKGIIK_09975	0.40	-1.2
2,152,774	-		OKGIIK_09975	0.40	-0.4
2,152,774	-		OKGIIK_09975	0.40	-0.4
2,152,774	-		OKGIIK_09975	0.40	-1.2
2,152,941	+		OKGIIK_09975	0.56	-0.7
2,152,941	+		OKGIIK_09975	0.56	-1.2
2,152,941	+		OKGIIK_09975	0.56	-1.4
2,152,942	-		OKGIIK_09975	0.56	-2.6
2,152,942	-		OKGIIK_09975	0.56	-0.4
2,152,942	-		OKGIIK_09975	0.56	-0.7
2,152,942	-		OKGIIK_09975	0.56	-1.4
2,153,025	+		OKGIIK_09975	0.64	-2.3
2,153,025	+		OKGIIK_09975	0.64	-2.2
2,153,025	+		OKGIIK_09975	0.64	-1.4
2,153,025	+		OKGIIK_09975	0.64	-1.6
2,153,025	+		OKGIIK_09975	0.64	-0.8
2,153,025	+		OKGIIK_09975	0.64	-0.4
2,153,026	-		OKGIIK_09975	0.65	-1.0
2,153,026	-		OKGIIK_09975	0.65	-2.9
2,153,026	-		OKGIIK_09975	0.65	-0.4
2,153,026	-		OKGIIK_09975	0.65	-1.4
2,153,055	+		OKGIIK_09975	0.67	-0.9
2,153,055	+		OKGIIK_09975	0.67	-0.4
2,153,055	+		OKGIIK_09975	0.67	-2.2
2,153,055	+		OKGIIK_09975	0.67	-3.1
2,153,055	+		OKGIIK_09975	0.67	-0.7
2,153,055	+		OKGIIK_09975	0.67	-2.5
2,153,055	+		OKGIIK_09975	0.67	-0.6
2,153,055	+		OKGIIK_09975	0.67	+0.3
2,153,055	+		OKGIIK_09975	0.67	-0.4
2,153,055	+		OKGIIK_09975	0.67	+1.3
2,153,055	+		OKGIIK_09975	0.67	-1.7
2,153,055	+		OKGIIK_09975	0.67	-1.0
2,153,055	+		OKGIIK_09975	0.67	-0.4
2,153,056	-		OKGIIK_09975	0.68	-1.1
2,153,056	-		OKGIIK_09975	0.68	-1.6
2,153,056	-		OKGIIK_09975	0.68	+1.2
2,153,056	-		OKGIIK_09975	0.68	-0.4
2,153,056	-		OKGIIK_09975	0.68	-1.9
2,153,056	-		OKGIIK_09975	0.68	-1.6
2,153,056	-		OKGIIK_09975	0.68	+0.0
2,153,056	-		OKGIIK_09975	0.68	-1.6
2,153,056	-		OKGIIK_09975	0.68	-0.7
2,153,056	-		OKGIIK_09975	0.68	-0.4
2,153,100	+		OKGIIK_09975	0.72	-1.4
2,153,226	+		OKGIIK_09975	0.84	-1.6
2,153,226	+		OKGIIK_09975	0.84	-0.4
2,153,226	+		OKGIIK_09975	0.84	+0.0
2,153,226	+		OKGIIK_09975	0.84	-0.7
2,153,226	+		OKGIIK_09975	0.84	-1.2
2,153,226	+		OKGIIK_09975	0.84	-2.0
2,153,226	+		OKGIIK_09975	0.84	-0.4
2,153,226	+		OKGIIK_09975	0.84	-0.7
2,153,226	+		OKGIIK_09975	0.84	-1.3
2,153,227	-		OKGIIK_09975	0.84	-0.4
2,153,227	-		OKGIIK_09975	0.84	-0.7
2,153,230	-		OKGIIK_09975	0.85	-0.5
2,153,250	+		OKGIIK_09975	0.87	-1.4
2,153,274	+		OKGIIK_09975	0.89	+0.3
2,153,274	+		OKGIIK_09975	0.89	-1.2
2,153,274	+		OKGIIK_09975	0.89	-0.4
2,153,275	-		OKGIIK_09975	0.89	-1.3
2,153,275	-		OKGIIK_09975	0.89	-0.7
2,153,275	-		OKGIIK_09975	0.89	-2.9
2,153,275	-		OKGIIK_09975	0.89	-0.4
2,153,280	+		OKGIIK_09975	0.90	-2.1
2,153,280	+		OKGIIK_09975	0.90	-2.0
2,153,280	+		OKGIIK_09975	0.90	-0.7
2,153,280	+		OKGIIK_09975	0.90	-1.3
2,153,280	+		OKGIIK_09975	0.90	-2.0
2,153,281	-		OKGIIK_09975	0.90	-2.0
2,153,281	-		OKGIIK_09975	0.90	+0.0
2,153,281	-		OKGIIK_09975	0.90	-1.5
2,153,525	+				-0.4
2,153,525	+				-1.0
2,153,525	+				-0.4
2,153,525	+				-1.0
2,153,525	+				-0.7
2,153,525	+				-0.2
2,153,525	+				-0.7
2,153,525	+				-0.7
2,153,526	-				-0.7
2,153,526	-				-1.2
2,153,526	-				-0.6
2,153,526	-				+0.0
2,153,526	-				-1.4
2,153,526	-				-0.7
2,153,526	-				-1.6
2,153,526	-				-0.7
2,153,526	-				-0.4
2,153,609	+				-1.0
2,153,615	+				-0.4
2,153,615	+				-0.7
2,153,615	+				-1.0
2,153,615	+				-1.6
2,153,616	-				+1.6
2,153,726	+				-2.2
2,153,861	+				-1.0
2,153,861	+				+0.3
2,153,861	+				+0.6
2,153,861	+				-0.4
2,153,862	-				-1.0
2,153,862	-				-0.4
2,154,176	+		OKGIIK_09980	0.24	+0.8
2,154,176	+		OKGIIK_09980	0.24	-0.4
2,154,176	+		OKGIIK_09980	0.24	-0.6
2,154,176	+		OKGIIK_09980	0.24	-1.0
2,154,176	+		OKGIIK_09980	0.24	-1.0
2,154,176	+		OKGIIK_09980	0.24	-0.4
2,154,176	+		OKGIIK_09980	0.24	-0.4
2,154,176	+		OKGIIK_09980	0.24	-0.4
2,154,176	+		OKGIIK_09980	0.24	-0.4
2,154,176	+		OKGIIK_09980	0.24	-1.9
2,154,176	+		OKGIIK_09980	0.24	-0.5
2,154,176	+		OKGIIK_09980	0.24	-0.4
2,154,176	+		OKGIIK_09980	0.24	+1.2
2,154,176	+		OKGIIK_09980	0.24	-1.0
2,154,176	+		OKGIIK_09980	0.24	-0.4
2,154,176	+		OKGIIK_09980	0.24	-1.6
2,154,176	+		OKGIIK_09980	0.24	-1.3
2,154,176	+		OKGIIK_09980	0.24	+1.2
2,154,176	+		OKGIIK_09980	0.24	-1.0
2,154,176	+		OKGIIK_09980	0.24	-0.0
2,154,176	+		OKGIIK_09980	0.24	+0.3
2,154,177	-		OKGIIK_09980	0.24	-2.1
2,154,177	-		OKGIIK_09980	0.24	-1.6
2,154,177	-		OKGIIK_09980	0.24	-2.3
2,154,177	-		OKGIIK_09980	0.24	-0.4
2,154,177	-		OKGIIK_09980	0.24	-1.9
2,154,177	-		OKGIIK_09980	0.24	+0.0
2,154,177	-		OKGIIK_09980	0.24	-2.3
2,154,177	-		OKGIIK_09980	0.24	-0.2
2,154,177	-		OKGIIK_09980	0.24	-1.5
2,154,177	-		OKGIIK_09980	0.24	-0.7
2,154,177	-		OKGIIK_09980	0.24	-1.0
2,154,177	-		OKGIIK_09980	0.24	-1.4
2,154,177	-		OKGIIK_09980	0.24	-1.0
2,154,177	-		OKGIIK_09980	0.24	-1.2
2,154,177	-		OKGIIK_09980	0.24	-3.2
2,154,177	-		OKGIIK_09980	0.24	+1.0
2,154,177	-		OKGIIK_09980	0.24	-2.0
2,154,177	-		OKGIIK_09980	0.24	-0.7
2,154,177	-		OKGIIK_09980	0.24	-1.9
2,154,177	-		OKGIIK_09980	0.24	-0.7
2,154,254	+		OKGIIK_09980	0.30	+0.5
2,154,254	+		OKGIIK_09980	0.30	-1.6
2,154,254	+		OKGIIK_09980	0.30	-0.7
2,154,254	+		OKGIIK_09980	0.30	-1.3
2,154,254	+		OKGIIK_09980	0.30	-1.0
2,154,254	+		OKGIIK_09980	0.30	-2.5
2,154,254	+		OKGIIK_09980	0.30	+0.7
2,154,254	+		OKGIIK_09980	0.30	-0.4
2,154,254	+		OKGIIK_09980	0.30	-2.3
2,154,254	+		OKGIIK_09980	0.30	-1.1
2,154,254	+		OKGIIK_09980	0.30	-0.7
2,154,254	+		OKGIIK_09980	0.30	-1.2
2,154,254	+		OKGIIK_09980	0.30	-0.7
2,154,254	+		OKGIIK_09980	0.30	-1.2
2,154,254	+		OKGIIK_09980	0.30	-1.4
2,154,254	+		OKGIIK_09980	0.30	-0.4
2,154,254	+		OKGIIK_09980	0.30	-0.7
2,154,254	+		OKGIIK_09980	0.30	+0.6
2,154,255	-		OKGIIK_09980	0.30	-1.9
2,154,255	-		OKGIIK_09980	0.30	-0.4
2,154,255	-		OKGIIK_09980	0.30	-0.9
2,154,255	-		OKGIIK_09980	0.30	-0.4
2,154,255	-		OKGIIK_09980	0.30	-1.2
2,154,255	-		OKGIIK_09980	0.30	-2.3
2,154,255	-		OKGIIK_09980	0.30	-0.7
2,154,255	-		OKGIIK_09980	0.30	-1.0
2,154,255	-		OKGIIK_09980	0.30	-2.2
2,154,255	-		OKGIIK_09980	0.30	-1.2
2,154,255	-		OKGIIK_09980	0.30	-1.4
2,154,255	-		OKGIIK_09980	0.30	-2.4
2,154,255	-		OKGIIK_09980	0.30	-0.7
2,154,255	-		OKGIIK_09980	0.30	+0.6
2,154,255	-		OKGIIK_09980	0.30	-2.7
2,154,255	-		OKGIIK_09980	0.30	-0.4
2,154,255	-		OKGIIK_09980	0.30	-0.4
2,154,255	-		OKGIIK_09980	0.30	-0.4
2,154,255	-		OKGIIK_09980	0.30	-1.7
2,154,255	-		OKGIIK_09980	0.30	-1.2
2,154,255	-		OKGIIK_09980	0.30	+0.0