Experiment: R2A_PIPES pH 4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_09815 and OKGIIK_09820 are separated by 104 nucleotides OKGIIK_09820 and OKGIIK_09825 overlap by 4 nucleotides
OKGIIK_09815: OKGIIK_09815 - Leucine--tRNA ligase, at 2,114,934 to 2,117,573
_09815
OKGIIK_09820: OKGIIK_09820 - ABC-trans-aux domain-containing protein, at 2,117,678 to 2,118,310
_09820
OKGIIK_09825: OKGIIK_09825 - Mammalian cell entry protein, at 2,118,307 to 2,119,995
_09825
Position (kb)
2117
2118
2119 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.892 kb on + strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2117.893 kb on - strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.213 kb on + strand, within OKGIIK_09820 at 2118.214 kb on - strand, within OKGIIK_09820 at 2118.214 kb on - strand, within OKGIIK_09820 at 2118.214 kb on - strand, within OKGIIK_09820 at 2118.214 kb on - strand, within OKGIIK_09820 at 2118.214 kb on - strand, within OKGIIK_09820 at 2118.214 kb on - strand, within OKGIIK_09820 at 2118.214 kb on - strand, within OKGIIK_09820 at 2118.214 kb on - strand, within OKGIIK_09820 at 2118.214 kb on - strand, within OKGIIK_09820 at 2118.214 kb on - strand, within OKGIIK_09820 at 2118.214 kb on - strand, within OKGIIK_09820 at 2118.216 kb on + strand, within OKGIIK_09820 at 2118.216 kb on + strand, within OKGIIK_09820 at 2118.216 kb on + strand, within OKGIIK_09820 at 2118.216 kb on + strand, within OKGIIK_09820 at 2118.216 kb on + strand, within OKGIIK_09820 at 2118.216 kb on + strand, within OKGIIK_09820 at 2118.216 kb on + strand, within OKGIIK_09820 at 2118.216 kb on + strand, within OKGIIK_09820 at 2118.217 kb on - strand, within OKGIIK_09820 at 2118.217 kb on - strand, within OKGIIK_09820 at 2118.217 kb on - strand, within OKGIIK_09820 at 2118.217 kb on - strand, within OKGIIK_09820 at 2118.217 kb on - strand, within OKGIIK_09820 at 2118.217 kb on - strand, within OKGIIK_09820 at 2118.217 kb on - strand, within OKGIIK_09820 at 2118.413 kb on + strand at 2118.414 kb on - strand at 2118.791 kb on + strand, within OKGIIK_09825 at 2118.791 kb on + strand, within OKGIIK_09825 at 2118.791 kb on + strand, within OKGIIK_09825 at 2118.791 kb on + strand, within OKGIIK_09825 at 2118.791 kb on + strand, within OKGIIK_09825 at 2118.791 kb on + strand, within OKGIIK_09825 at 2118.791 kb on + strand, within OKGIIK_09825 at 2118.791 kb on + strand, within OKGIIK_09825 at 2118.792 kb on + strand, within OKGIIK_09825 at 2118.792 kb on - strand, within OKGIIK_09825 at 2118.792 kb on - strand, within OKGIIK_09825 at 2118.792 kb on - strand, within OKGIIK_09825 at 2118.792 kb on - strand, within OKGIIK_09825 at 2118.792 kb on - strand, within OKGIIK_09825 at 2118.792 kb on - strand, within OKGIIK_09825 at 2118.792 kb on - strand, within OKGIIK_09825 at 2118.792 kb on - strand, within OKGIIK_09825 at 2118.792 kb on - strand, within OKGIIK_09825 at 2118.792 kb on - strand, within OKGIIK_09825 at 2118.792 kb on - strand, within OKGIIK_09825 at 2118.792 kb on - strand, within OKGIIK_09825 at 2118.921 kb on - strand, within OKGIIK_09825 at 2118.944 kb on + strand, within OKGIIK_09825 at 2118.944 kb on + strand, within OKGIIK_09825 at 2118.944 kb on + strand, within OKGIIK_09825 at 2118.945 kb on - strand, within OKGIIK_09825 at 2118.945 kb on - strand, within OKGIIK_09825 at 2118.992 kb on + strand, within OKGIIK_09825 at 2118.992 kb on + strand, within OKGIIK_09825 at 2118.993 kb on - strand, within OKGIIK_09825 at 2119.097 kb on + strand, within OKGIIK_09825 at 2119.097 kb on + strand, within OKGIIK_09825 at 2119.097 kb on + strand, within OKGIIK_09825 at 2119.097 kb on + strand, within OKGIIK_09825 at 2119.097 kb on + strand, within OKGIIK_09825 at 2119.097 kb on + strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.098 kb on - strand, within OKGIIK_09825 at 2119.155 kb on - strand, within OKGIIK_09825 at 2119.155 kb on - strand, within OKGIIK_09825 at 2119.155 kb on - strand, within OKGIIK_09825
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES pH 4 remove 2,117,892 + OKGIIK_09820 0.34 +1.1 2,117,892 + OKGIIK_09820 0.34 +0.5 2,117,892 + OKGIIK_09820 0.34 -0.6 2,117,892 + OKGIIK_09820 0.34 +1.4 2,117,892 + OKGIIK_09820 0.34 -0.6 2,117,892 + OKGIIK_09820 0.34 -0.2 2,117,892 + OKGIIK_09820 0.34 +0.4 2,117,892 + OKGIIK_09820 0.34 +0.6 2,117,892 + OKGIIK_09820 0.34 -1.0 2,117,892 + OKGIIK_09820 0.34 +0.4 2,117,892 + OKGIIK_09820 0.34 +0.4 2,117,892 + OKGIIK_09820 0.34 -0.6 2,117,892 + OKGIIK_09820 0.34 +1.9 2,117,892 + OKGIIK_09820 0.34 +0.8 2,117,892 + OKGIIK_09820 0.34 +1.4 2,117,892 + OKGIIK_09820 0.34 -1.2 2,117,892 + OKGIIK_09820 0.34 -0.2 2,117,892 + OKGIIK_09820 0.34 +0.5 2,117,892 + OKGIIK_09820 0.34 +0.9 2,117,892 + OKGIIK_09820 0.34 -0.2 2,117,892 + OKGIIK_09820 0.34 +0.8 2,117,892 + OKGIIK_09820 0.34 -0.4 2,117,892 + OKGIIK_09820 0.34 +1.4 2,117,893 - OKGIIK_09820 0.34 -0.6 2,117,893 - OKGIIK_09820 0.34 +0.4 2,117,893 - OKGIIK_09820 0.34 -0.0 2,117,893 - OKGIIK_09820 0.34 -0.1 2,117,893 - OKGIIK_09820 0.34 -1.2 2,117,893 - OKGIIK_09820 0.34 -0.4 2,117,893 - OKGIIK_09820 0.34 +0.2 2,117,893 - OKGIIK_09820 0.34 +2.4 2,117,893 - OKGIIK_09820 0.34 +1.4 2,117,893 - OKGIIK_09820 0.34 +1.0 2,117,893 - OKGIIK_09820 0.34 +1.0 2,117,893 - OKGIIK_09820 0.34 +2.1 2,117,893 - OKGIIK_09820 0.34 -0.1 2,117,893 - OKGIIK_09820 0.34 -0.6 2,117,893 - OKGIIK_09820 0.34 +1.0 2,117,893 - OKGIIK_09820 0.34 -0.1 2,117,893 - OKGIIK_09820 0.34 +0.4 2,117,893 - OKGIIK_09820 0.34 +0.4 2,117,893 - OKGIIK_09820 0.34 -0.1 2,117,893 - OKGIIK_09820 0.34 +0.2 2,117,893 - OKGIIK_09820 0.34 +0.2 2,117,893 - OKGIIK_09820 0.34 +1.0 2,117,893 - OKGIIK_09820 0.34 -1.3 2,117,893 - OKGIIK_09820 0.34 -0.2 2,117,893 - OKGIIK_09820 0.34 +2.7 2,117,893 - OKGIIK_09820 0.34 +0.0 2,117,893 - OKGIIK_09820 0.34 +0.9 2,117,893 - OKGIIK_09820 0.34 +1.6 2,117,893 - OKGIIK_09820 0.34 +1.5 2,117,893 - OKGIIK_09820 0.34 +1.9 2,117,893 - OKGIIK_09820 0.34 +2.4 2,118,213 + OKGIIK_09820 0.85 -1.7 2,118,213 + OKGIIK_09820 0.85 +0.4 2,118,213 + OKGIIK_09820 0.85 +0.5 2,118,213 + OKGIIK_09820 0.85 +0.9 2,118,213 + OKGIIK_09820 0.85 -0.7 2,118,213 + OKGIIK_09820 0.85 +0.0 2,118,213 + OKGIIK_09820 0.85 +1.4 2,118,213 + OKGIIK_09820 0.85 -0.8 2,118,213 + OKGIIK_09820 0.85 +0.8 2,118,213 + OKGIIK_09820 0.85 +0.8 2,118,213 + OKGIIK_09820 0.85 -2.0 2,118,213 + OKGIIK_09820 0.85 -0.6 2,118,213 + OKGIIK_09820 0.85 +0.4 2,118,213 + OKGIIK_09820 0.85 -0.2 2,118,214 - OKGIIK_09820 0.85 -0.1 2,118,214 - OKGIIK_09820 0.85 +0.4 2,118,214 - OKGIIK_09820 0.85 +0.0 2,118,214 - OKGIIK_09820 0.85 +0.4 2,118,214 - OKGIIK_09820 0.85 +0.5 2,118,214 - OKGIIK_09820 0.85 +1.0 2,118,214 - OKGIIK_09820 0.85 +1.0 2,118,214 - OKGIIK_09820 0.85 +0.1 2,118,214 - OKGIIK_09820 0.85 +0.6 2,118,214 - OKGIIK_09820 0.85 +0.9 2,118,214 - OKGIIK_09820 0.85 -0.2 2,118,216 + OKGIIK_09820 0.85 +1.8 2,118,216 + OKGIIK_09820 0.85 -1.1 2,118,216 + OKGIIK_09820 0.85 +0.1 2,118,216 + OKGIIK_09820 0.85 +0.1 2,118,216 + OKGIIK_09820 0.85 +0.6 2,118,216 + OKGIIK_09820 0.85 +1.8 2,118,216 + OKGIIK_09820 0.85 +1.1 2,118,216 + OKGIIK_09820 0.85 -1.2 2,118,217 - OKGIIK_09820 0.85 -1.6 2,118,217 - OKGIIK_09820 0.85 +0.2 2,118,217 - OKGIIK_09820 0.85 +1.6 2,118,217 - OKGIIK_09820 0.85 +0.9 2,118,217 - OKGIIK_09820 0.85 -1.4 2,118,217 - OKGIIK_09820 0.85 -1.2 2,118,217 - OKGIIK_09820 0.85 -1.0 2,118,413 + +0.6 2,118,414 - +0.7 2,118,791 + OKGIIK_09825 0.29 +0.4 2,118,791 + OKGIIK_09825 0.29 +1.0 2,118,791 + OKGIIK_09825 0.29 +0.6 2,118,791 + OKGIIK_09825 0.29 +1.5 2,118,791 + OKGIIK_09825 0.29 +1.7 2,118,791 + OKGIIK_09825 0.29 +0.3 2,118,791 + OKGIIK_09825 0.29 -1.2 2,118,791 + OKGIIK_09825 0.29 -0.1 2,118,792 + OKGIIK_09825 0.29 +0.3 2,118,792 - OKGIIK_09825 0.29 -0.4 2,118,792 - OKGIIK_09825 0.29 +0.0 2,118,792 - OKGIIK_09825 0.29 +1.3 2,118,792 - OKGIIK_09825 0.29 +0.0 2,118,792 - OKGIIK_09825 0.29 +1.4 2,118,792 - OKGIIK_09825 0.29 +0.9 2,118,792 - OKGIIK_09825 0.29 +1.2 2,118,792 - OKGIIK_09825 0.29 +1.1 2,118,792 - OKGIIK_09825 0.29 +0.0 2,118,792 - OKGIIK_09825 0.29 +0.6 2,118,792 - OKGIIK_09825 0.29 -0.2 2,118,792 - OKGIIK_09825 0.29 +0.0 2,118,921 - OKGIIK_09825 0.36 +0.7 2,118,944 + OKGIIK_09825 0.38 +1.9 2,118,944 + OKGIIK_09825 0.38 -0.2 2,118,944 + OKGIIK_09825 0.38 -0.4 2,118,945 - OKGIIK_09825 0.38 +0.9 2,118,945 - OKGIIK_09825 0.38 +0.0 2,118,992 + OKGIIK_09825 0.41 +1.4 2,118,992 + OKGIIK_09825 0.41 +0.6 2,118,993 - OKGIIK_09825 0.41 +0.2 2,119,097 + OKGIIK_09825 0.47 +0.8 2,119,097 + OKGIIK_09825 0.47 -0.6 2,119,097 + OKGIIK_09825 0.47 +0.9 2,119,097 + OKGIIK_09825 0.47 +0.6 2,119,097 + OKGIIK_09825 0.47 -2.0 2,119,097 + OKGIIK_09825 0.47 -1.1 2,119,098 - OKGIIK_09825 0.47 +1.1 2,119,098 - OKGIIK_09825 0.47 -0.5 2,119,098 - OKGIIK_09825 0.47 +0.0 2,119,098 - OKGIIK_09825 0.47 -2.1 2,119,098 - OKGIIK_09825 0.47 -0.3 2,119,098 - OKGIIK_09825 0.47 -0.9 2,119,098 - OKGIIK_09825 0.47 +1.4 2,119,098 - OKGIIK_09825 0.47 -0.8 2,119,098 - OKGIIK_09825 0.47 +0.0 2,119,098 - OKGIIK_09825 0.47 +1.9 2,119,098 - OKGIIK_09825 0.47 +1.0 2,119,098 - OKGIIK_09825 0.47 +0.6 2,119,098 - OKGIIK_09825 0.47 -0.4 2,119,098 - OKGIIK_09825 0.47 -1.5 2,119,098 - OKGIIK_09825 0.47 -1.0 2,119,098 - OKGIIK_09825 0.47 -0.8 2,119,155 - OKGIIK_09825 0.50 +0.8 2,119,155 - OKGIIK_09825 0.50 +0.6 2,119,155 - OKGIIK_09825 0.50 -1.8
Or see this region's nucleotide sequence