Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_09695

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,094,515	+	srmB	OKGIIK_09690	0.74	+2.1
2,094,515	+	srmB	OKGIIK_09690	0.74	-1.3
2,094,515	+	srmB	OKGIIK_09690	0.74	+1.6
2,094,515	+	srmB	OKGIIK_09690	0.74	+1.6
2,094,515	+	srmB	OKGIIK_09690	0.74	+1.0
2,094,515	+	srmB	OKGIIK_09690	0.74	-0.4
2,094,515	+	srmB	OKGIIK_09690	0.74	+0.6
2,094,515	+	srmB	OKGIIK_09690	0.74	-0.4
2,094,515	+	srmB	OKGIIK_09690	0.74	+1.3
2,094,515	+	srmB	OKGIIK_09690	0.74	-1.7
2,094,515	+	srmB	OKGIIK_09690	0.74	-1.5
2,094,515	+	srmB	OKGIIK_09690	0.74	-0.5
2,094,515	+	srmB	OKGIIK_09690	0.74	-1.5
2,094,515	+	srmB	OKGIIK_09690	0.74	-0.4
2,094,515	+	srmB	OKGIIK_09690	0.74	-0.2
2,094,515	+	srmB	OKGIIK_09690	0.74	+0.7
2,094,515	+	srmB	OKGIIK_09690	0.74	+0.1
2,094,515	+	srmB	OKGIIK_09690	0.74	+1.7
2,094,516	-	srmB	OKGIIK_09690	0.74	-2.3
2,094,516	-	srmB	OKGIIK_09690	0.74	+1.7
2,094,516	-	srmB	OKGIIK_09690	0.74	-2.1
2,094,516	-	srmB	OKGIIK_09690	0.74	-1.5
2,094,516	-	srmB	OKGIIK_09690	0.74	+0.4
2,094,516	-	srmB	OKGIIK_09690	0.74	-0.9
2,094,516	-	srmB	OKGIIK_09690	0.74	-1.1
2,094,516	-	srmB	OKGIIK_09690	0.74	-1.8
2,094,516	-	srmB	OKGIIK_09690	0.74	-0.5
2,094,516	-	srmB	OKGIIK_09690	0.74	+0.9
2,094,516	-	srmB	OKGIIK_09690	0.74	-0.6
2,094,516	-	srmB	OKGIIK_09690	0.74	+1.5
2,094,516	-	srmB	OKGIIK_09690	0.74	-0.2
2,094,516	-	srmB	OKGIIK_09690	0.74	-0.8
2,094,657	-	srmB	OKGIIK_09690	0.84	-2.4
2,094,657	-	srmB	OKGIIK_09690	0.84	-0.6
2,094,936	+				-0.7
2,094,936	+				+0.6
2,094,936	+				-2.0
2,094,936	+				-1.7
2,094,936	+				+1.2
2,094,936	+				+0.8
2,094,937	-				+1.0
2,094,937	-				+0.6
2,094,965	+				+2.0
2,094,965	+				+1.1
2,094,965	+				+1.1
2,094,966	-				+0.4
2,094,987	+				+0.4
2,094,987	+				-1.2
2,094,987	+				-1.1
2,094,987	+				-0.8
2,094,987	+				-0.2
2,094,987	+				-3.0
2,094,987	+				-0.2
2,094,987	+				+0.6
2,094,987	+				-1.2
2,094,987	+				+0.4
2,094,987	+				-0.1
2,094,987	+				+0.1
2,094,987	+				+0.1
2,094,987	+				-0.2
2,094,988	-				-0.1
2,095,053	+				+1.4
2,095,053	+				+1.8
2,095,053	+				+2.0
2,095,053	+				-0.9
2,095,053	+				-0.2
2,095,053	+				-0.2
2,095,053	+				+1.0
2,095,053	+				-0.9
2,095,053	+				+1.2
2,095,053	+				+0.2
2,095,053	+				-0.8
2,095,054	-				-0.2
2,095,054	-				-1.2
2,095,054	-				+0.9
2,095,054	-				+0.1
2,095,054	-				-0.8
2,095,054	-				-0.2
2,095,054	-				+0.9
2,095,065	+				-0.2
2,095,065	+				+1.1
2,095,065	+				+1.1
2,095,065	+				+2.6
2,095,066	-				-0.9
2,095,228	-	fghA	OKGIIK_09695	0.29	-0.9
2,095,260	+	fghA	OKGIIK_09695	0.32	-0.1
2,095,261	-	fghA	OKGIIK_09695	0.32	-0.3
2,095,261	-	fghA	OKGIIK_09695	0.32	-0.2
2,095,261	-	fghA	OKGIIK_09695	0.32	-2.4
2,095,261	-	fghA	OKGIIK_09695	0.32	-0.8
2,095,261	-	fghA	OKGIIK_09695	0.32	+0.3
2,095,261	-	fghA	OKGIIK_09695	0.32	-1.1
2,095,464	+	fghA	OKGIIK_09695	0.56	-0.7
2,095,464	+	fghA	OKGIIK_09695	0.56	+1.3
2,095,464	+	fghA	OKGIIK_09695	0.56	+1.4
2,095,464	+	fghA	OKGIIK_09695	0.56	+0.1
2,095,464	+	fghA	OKGIIK_09695	0.56	-0.6
2,095,464	+	fghA	OKGIIK_09695	0.56	-0.8
2,095,464	+	fghA	OKGIIK_09695	0.56	+0.2
2,095,464	+	fghA	OKGIIK_09695	0.56	+1.2
2,095,464	+	fghA	OKGIIK_09695	0.56	-2.3
2,095,464	+	fghA	OKGIIK_09695	0.56	+0.1
2,095,464	+	fghA	OKGIIK_09695	0.56	+0.4
2,095,464	+	fghA	OKGIIK_09695	0.56	+0.1
2,095,464	+	fghA	OKGIIK_09695	0.56	+1.5
2,095,464	+	fghA	OKGIIK_09695	0.56	-1.5
2,095,464	+	fghA	OKGIIK_09695	0.56	+0.8
2,095,464	+	fghA	OKGIIK_09695	0.56	-2.7
2,095,464	+	fghA	OKGIIK_09695	0.56	+1.1
2,095,464	+	fghA	OKGIIK_09695	0.56	-0.7
2,095,465	-	fghA	OKGIIK_09695	0.56	+0.6
2,095,465	-	fghA	OKGIIK_09695	0.56	+0.8
2,095,465	-	fghA	OKGIIK_09695	0.56	+0.1
2,095,465	-	fghA	OKGIIK_09695	0.56	+1.7
2,095,465	-	fghA	OKGIIK_09695	0.56	+1.1
2,095,465	-	fghA	OKGIIK_09695	0.56	+0.4
2,095,465	-	fghA	OKGIIK_09695	0.56	-1.6
2,095,465	-	fghA	OKGIIK_09695	0.56	-1.2
2,095,465	-	fghA	OKGIIK_09695	0.56	-1.9
2,095,465	-	fghA	OKGIIK_09695	0.56	-1.2
2,095,465	-	fghA	OKGIIK_09695	0.56	-0.7
2,095,465	-	fghA	OKGIIK_09695	0.56	-0.8
2,095,465	-	fghA	OKGIIK_09695	0.56	+0.1
2,095,465	-	fghA	OKGIIK_09695	0.56	+0.7
2,095,465	-	fghA	OKGIIK_09695	0.56	-0.7
2,095,465	-	fghA	OKGIIK_09695	0.56	+0.2
2,095,465	-	fghA	OKGIIK_09695	0.56	-0.0
2,095,465	-	fghA	OKGIIK_09695	0.56	+0.4
2,095,465	-	fghA	OKGIIK_09695	0.56	+1.0
2,095,465	-	fghA	OKGIIK_09695	0.56	+1.8
2,095,465	-	fghA	OKGIIK_09695	0.56	-0.2
2,095,465	-	fghA	OKGIIK_09695	0.56	-1.5
2,095,465	-	fghA	OKGIIK_09695	0.56	-0.7
2,095,465	-	fghA	OKGIIK_09695	0.56	+1.1
2,095,465	-	fghA	OKGIIK_09695	0.56	+1.4
2,095,465	-	fghA	OKGIIK_09695	0.56	+0.1
2,095,465	-	fghA	OKGIIK_09695	0.56	-1.1
2,095,515	+	fghA	OKGIIK_09695	0.62	+0.3
2,095,515	+	fghA	OKGIIK_09695	0.62	+0.6
2,095,515	+	fghA	OKGIIK_09695	0.62	-0.6
2,095,516	-	fghA	OKGIIK_09695	0.62	+1.1
2,095,516	-	fghA	OKGIIK_09695	0.62	+0.4
2,095,516	-	fghA	OKGIIK_09695	0.62	-2.7
2,095,516	-	fghA	OKGIIK_09695	0.62	-0.9
2,095,564	+	fghA	OKGIIK_09695	0.68	+0.1
2,095,683	+	fghA	OKGIIK_09695	0.82	+1.4
2,095,683	+	fghA	OKGIIK_09695	0.82	+2.9
2,095,683	+	fghA	OKGIIK_09695	0.82	+0.4
2,095,683	+	fghA	OKGIIK_09695	0.82	-1.3
2,095,683	+	fghA	OKGIIK_09695	0.82	+2.8
2,095,683	+	fghA	OKGIIK_09695	0.82	+0.1
2,095,683	+	fghA	OKGIIK_09695	0.82	+0.6
2,095,683	+	fghA	OKGIIK_09695	0.82	+1.1
2,095,683	+	fghA	OKGIIK_09695	0.82	+0.9
2,095,684	-	fghA	OKGIIK_09695	0.82	-0.9
2,095,684	-	fghA	OKGIIK_09695	0.82	-0.6
2,095,684	-	fghA	OKGIIK_09695	0.82	-0.5
2,095,684	-	fghA	OKGIIK_09695	0.82	+0.1
2,095,686	+	fghA	OKGIIK_09695	0.82	+3.5
2,095,686	+	fghA	OKGIIK_09695	0.82	+0.6
2,095,686	+	fghA	OKGIIK_09695	0.82	+0.3
2,095,686	+	fghA	OKGIIK_09695	0.82	+0.5
2,095,686	+	fghA	OKGIIK_09695	0.82	+1.3
2,095,686	+	fghA	OKGIIK_09695	0.82	+1.4
2,095,686	+	fghA	OKGIIK_09695	0.82	+1.5
2,095,686	+	fghA	OKGIIK_09695	0.82	+0.6
2,095,686	+	fghA	OKGIIK_09695	0.82	-0.6
2,095,686	+	fghA	OKGIIK_09695	0.82	-1.5
2,095,686	+	fghA	OKGIIK_09695	0.82	+0.4
2,095,686	+	fghA	OKGIIK_09695	0.82	+1.0
2,095,686	+	fghA	OKGIIK_09695	0.82	+2.7
2,095,686	+	fghA	OKGIIK_09695	0.82	+2.7
2,095,686	+	fghA	OKGIIK_09695	0.82	-1.4
2,095,686	+	fghA	OKGIIK_09695	0.82	+1.7
2,095,686	+	fghA	OKGIIK_09695	0.82	+0.4
2,095,686	+	fghA	OKGIIK_09695	0.82	-0.2
2,095,686	+	fghA	OKGIIK_09695	0.82	-1.1
2,095,687	-	fghA	OKGIIK_09695	0.83	+0.6
2,095,687	-	fghA	OKGIIK_09695	0.83	+1.7
2,095,687	-	fghA	OKGIIK_09695	0.83	+0.6
2,095,687	-	fghA	OKGIIK_09695	0.83	+0.4
2,095,687	-	fghA	OKGIIK_09695	0.83	-0.1
2,095,687	-	fghA	OKGIIK_09695	0.83	-0.7
2,095,687	-	fghA	OKGIIK_09695	0.83	+0.3
2,095,687	-	fghA	OKGIIK_09695	0.83	-0.2
2,095,687	-	fghA	OKGIIK_09695	0.83	+0.6
2,095,687	-	fghA	OKGIIK_09695	0.83	-0.2
2,095,687	-	fghA	OKGIIK_09695	0.83	+0.2
2,095,687	-	fghA	OKGIIK_09695	0.83	-0.0
2,095,687	-	fghA	OKGIIK_09695	0.83	-0.3
2,095,687	-	fghA	OKGIIK_09695	0.83	+1.2
2,095,687	-	fghA	OKGIIK_09695	0.83	-0.4
2,095,687	-	fghA	OKGIIK_09695	0.83	+0.4
2,095,687	-	fghA	OKGIIK_09695	0.83	-0.2
2,095,728	+	fghA	OKGIIK_09695	0.87	+2.0
2,095,728	+	fghA	OKGIIK_09695	0.87	-0.2
2,095,728	+	fghA	OKGIIK_09695	0.87	+0.2
2,095,729	-	fghA	OKGIIK_09695	0.88	+0.2
2,095,776	+				+1.0
2,095,776	+				+0.7
2,095,776	+				+0.2
2,095,777	-				-0.5
2,095,777	-				+2.4
2,095,777	-				+1.4
2,095,869	+				-0.2
2,095,869	+				+0.1
2,095,869	+				+0.6
2,095,869	+				+0.5
2,095,869	+				+0.6
2,095,869	+				-0.1
2,095,870	-				+1.1
2,095,870	-				+0.8
2,095,870	-				+1.1
2,095,948	+				+0.8
2,095,948	+				-0.0
2,095,948	+				-1.1
2,095,948	+				+0.9
2,095,948	+				-2.6
2,095,948	+				-0.2
2,095,948	+				-0.2
2,095,949	-				+0.4
2,095,949	-				+0.2
2,096,133	+		OKGIIK_09700	0.30	+0.7
2,096,134	-		OKGIIK_09700	0.30	-0.8
2,096,134	-		OKGIIK_09700	0.30	-1.1
2,096,134	-		OKGIIK_09700	0.30	+0.5
2,096,134	-		OKGIIK_09700	0.30	+0.6
2,096,370	+		OKGIIK_09700	0.62	-0.3
2,096,370	+		OKGIIK_09700	0.62	-2.4
2,096,370	+		OKGIIK_09700	0.62	+3.0
2,096,370	+		OKGIIK_09700	0.62	+1.1
2,096,370	+		OKGIIK_09700	0.62	-0.1
2,096,370	+		OKGIIK_09700	0.62	+1.1
2,096,370	+		OKGIIK_09700	0.62	+0.1
2,096,370	+		OKGIIK_09700	0.62	-0.9
2,096,371	-		OKGIIK_09700	0.62	+2.1
2,096,371	-		OKGIIK_09700	0.62	+3.0
2,096,371	-		OKGIIK_09700	0.62	-1.5
2,096,371	-		OKGIIK_09700	0.62	+0.8
2,096,371	-		OKGIIK_09700	0.62	-0.3
2,096,371	-		OKGIIK_09700	0.62	-0.2
2,096,371	-		OKGIIK_09700	0.62	-1.4
2,096,371	-		OKGIIK_09700	0.62	+0.4
2,096,371	-		OKGIIK_09700	0.62	+0.1
2,096,521	+		OKGIIK_09700	0.82	+0.4
2,096,522	-		OKGIIK_09700	0.82	+1.6
2,096,685	+				+2.3
2,096,685	+				+1.4
2,096,685	+				-0.7
2,096,685	+				+2.1
2,096,685	+				+3.0
2,096,685	+				+0.6
2,096,685	+				+0.9
2,096,686	-				+0.1
2,096,686	-				-1.5
2,096,715	+				+1.6
2,096,715	+				-0.6
2,096,715	+				-0.1
2,096,715	+				+1.2
2,096,716	-				-1.0
2,096,716	-				+0.6
2,096,716	-				-0.4
2,096,716	-				-1.1
2,096,716	-				+1.2
2,096,716	-				+1.2
2,096,716	-				-0.9
2,096,716	-				+0.2
2,096,716	-				-1.5
2,096,716	-				-0.5
2,096,720	+				-0.9
2,096,720	+				+0.7
2,096,720	+				-0.9
2,096,720	+				-2.0
2,096,721	-				-0.2
2,096,721	-				+0.4
2,096,721	-				+0.1
2,096,721	-				+1.1
2,096,721	-				+0.1