Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_09500

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,057,747	+				-0.4
2,057,747	+				+0.4
2,057,747	+				+0.8
2,057,747	+				+0.8
2,057,747	+				-0.2
2,057,747	+				-0.6
2,057,747	+				+1.3
2,057,747	+				-1.4
2,057,747	+				+0.8
2,057,747	+				-1.8
2,057,747	+				-0.2
2,057,747	+				+0.9
2,057,747	+				-0.4
2,057,747	+				+0.5
2,057,747	+				+0.3
2,057,747	+				-1.1
2,057,747	+				-0.2
2,057,747	+				-0.9
2,057,747	+				+0.8
2,057,747	+				-0.7
2,057,747	+				-0.6
2,057,747	+				-0.3
2,057,747	+				+0.1
2,057,747	+				-0.5
2,057,747	+				-1.2
2,057,747	+				+0.4
2,057,747	+				+0.4
2,057,748	-				+2.7
2,057,748	-				+0.2
2,057,748	-				+0.3
2,057,748	-				-1.0
2,057,748	-				-1.7
2,057,748	-				+2.6
2,057,748	-				+0.1
2,057,748	-				+0.9
2,057,748	-				+0.8
2,057,748	-				+0.8
2,057,748	-				+0.8
2,057,748	-				-0.3
2,057,748	-				+0.3
2,057,748	-				-1.5
2,057,748	-				+1.8
2,057,748	-				+1.6
2,057,748	-				+0.5
2,057,748	-				+0.7
2,057,748	-				-0.1
2,057,748	-				+0.4
2,057,748	-				+0.8
2,057,748	-				-0.5
2,057,790	+				-0.6
2,057,790	+				-1.8
2,057,791	-				+1.2
2,057,791	-				-0.3
2,057,793	+				-0.1
2,057,793	+				+0.6
2,057,793	+				+0.4
2,057,793	+				+0.6
2,057,793	+				-1.3
2,057,793	+				-1.7
2,057,793	+				+0.4
2,057,793	+				+0.6
2,057,793	+				-0.2
2,057,793	+				+0.7
2,057,793	+				-1.1
2,057,793	+				-1.2
2,057,794	-				-1.1
2,057,794	-				+1.0
2,057,794	-				+0.4
2,057,794	-				+0.4
2,057,794	-				+0.6
2,057,794	-				-0.9
2,057,794	-				+0.8
2,057,794	-				+1.0
2,057,794	-				+0.8
2,057,794	-				-0.2
2,058,230	-				+0.8
2,058,230	-				+0.5
2,058,230	-				-0.1
2,058,230	-				-0.2
2,058,230	-				-2.1
2,058,230	-				-0.5
2,058,997	+	dksA	OKGIIK_09500	0.54	+1.0
2,058,997	+	dksA	OKGIIK_09500	0.54	+0.1
2,058,998	-	dksA	OKGIIK_09500	0.54	+1.9
2,059,513	-				+0.9
2,059,531	-				+0.1
2,059,567	+				-0.2
2,059,568	-				-0.9
2,059,568	-				-0.5
2,059,568	-				+0.4
2,059,568	-				+1.4
2,059,568	-				-0.2
2,059,568	-				+0.9
2,059,570	-				+1.5
2,059,570	-				-1.5
2,059,570	-				-0.9
2,059,570	-				-0.6
2,059,570	-				+2.4
2,059,570	-				-0.1
2,059,570	-				-0.0
2,059,583	+				+0.4
2,059,583	+				+0.4
2,059,584	-				-0.8
2,059,584	-				-0.4
2,059,608	+				-0.9
2,059,608	+				-0.2
2,059,608	+				-0.6
2,059,608	+				-1.6
2,059,608	+				+0.8
2,059,608	+				+0.4
2,059,608	+				+0.1
2,059,608	+				-0.4
2,059,608	+				-0.8
2,059,609	-				+2.4
2,059,609	-				+0.4
2,059,609	-				-0.4
2,059,609	-				-1.9
2,059,614	+				+0.0
2,059,614	+				+0.4
2,059,614	+				+0.8
2,059,614	+				-0.8
2,059,614	+				-0.9
2,059,614	+				-0.2
2,059,614	+				+0.4
2,059,614	+				-0.4
2,059,614	+				-0.7
2,059,614	+				-1.7
2,059,615	-				+0.4
2,059,615	-				+0.9
2,059,615	-				-0.3
2,059,615	-				+0.4
2,059,615	-				+0.8
2,059,615	-				+1.1
2,059,615	-				-1.2
2,059,615	-				-1.3
2,059,615	-				+0.1
2,059,615	-				+0.3
2,059,620	+				+0.5
2,059,620	+				-1.2
2,059,620	+				-0.7
2,059,620	+				-2.3
2,059,620	+				+1.4
2,059,621	-				+1.2
2,059,621	-				-0.6
2,059,621	-				+0.7
2,059,621	-				-1.2
2,059,621	-				-0.9
2,059,668	+				-2.7
2,059,668	+				-0.4
2,059,668	+				+1.3
2,059,668	+				+0.4
2,059,668	+				+1.0
2,059,668	+				+1.7
2,059,668	+				+1.0
2,059,668	+				-0.6
2,059,668	+				+0.0
2,059,668	+				-0.7
2,059,668	+				-1.3
2,059,668	+				+0.3
2,059,669	-				-0.4
2,059,669	-				+0.4
2,059,669	-				+0.2
2,059,669	-				-1.6
2,059,688	+				-0.9
2,059,688	+				+1.3
2,059,688	+				+1.4
2,059,689	-				+1.1
2,059,689	-				+1.4
2,059,689	-				+2.0
2,059,689	-				-0.4
2,059,689	-				-0.8
2,059,738	+				-0.8
2,059,738	+				+0.1
2,059,738	+				+0.1
2,059,738	+				-0.6
2,059,738	+				+1.1
2,059,738	+				+0.9
2,059,738	+				+1.4
2,059,738	+				-1.4
2,059,738	+				-1.2
2,059,738	+				+0.3
2,059,739	-				-0.8
2,059,739	-				-1.7
2,059,739	-				-2.9
2,059,739	-				-0.9
2,059,739	-				-0.6
2,059,752	-				+0.2
2,059,752	-				-0.3
2,059,818	+				+0.3
2,059,818	+				+0.5
2,059,818	+				+0.5
2,059,818	+				+0.8
2,059,818	+				+0.4
2,059,819	-				-0.3
2,059,819	-				-2.2
2,059,819	-				-1.2
2,059,819	-				+0.4
2,059,819	-				-0.9
2,059,896	+				-1.2
2,059,896	+				+0.1
2,059,896	+				+0.4
2,059,896	+				+1.7
2,059,896	+				-0.6
2,059,896	+				-0.9
2,059,896	+				+1.0
2,059,896	+				-2.0
2,059,896	+				-2.0
2,059,896	+				+2.1
2,059,896	+				-0.2
2,059,896	+				+0.2
2,059,896	+				-0.9
2,059,897	-				+1.5
2,059,897	-				-0.4
2,059,897	-				+0.7
2,059,897	-				+2.1
2,059,897	-				-0.5
2,059,897	-				+0.6
2,059,897	-				+1.4
2,059,897	-				+0.7
2,059,897	-				-0.7
2,059,897	-				+0.1
2,059,980	+				-1.1
2,059,980	+				-0.6
2,059,980	+				+0.4
2,059,980	+				+0.1
2,059,980	+				+0.2
2,059,980	+				-0.9
2,059,980	+				-0.4
2,059,980	+				+1.1
2,059,980	+				+0.6
2,059,980	+				-0.2
2,059,980	+				-2.4
2,059,981	-				-0.8
2,059,981	-				+1.2
2,059,981	-				-0.9
2,059,981	-				-0.3
2,059,981	-				-0.5
2,059,981	-				-0.2
2,060,092	-				-0.2
2,060,092	-				+0.8
2,060,092	-				+1.0
2,060,092	-				-0.9
2,060,106	+				+2.0
2,060,106	+				-0.2
2,060,106	+				-0.1
2,060,106	+				+0.3
2,060,106	+				-0.2
2,060,106	+				+1.1
2,060,106	+				-0.9
2,060,106	+				+0.8
2,060,106	+				+1.1
2,060,106	+				-1.1
2,060,106	+				+0.3
2,060,106	+				-0.9
2,060,107	-				-0.4
2,060,107	-				-0.2
2,060,107	-				-0.0
2,060,151	+				+1.2
2,060,151	+				+0.1
2,060,152	-				+0.2
2,060,152	-				-0.6
2,060,152	-				+1.4
2,060,152	-				+0.6
2,060,152	-				+0.1
2,060,152	-				-0.2
2,060,152	-				-2.6
2,060,152	-				+0.7
2,060,172	-				-0.9