Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_09440

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,047,051	+				+1.5
2,047,051	+				+0.5
2,047,051	+				+0.7
2,047,051	+				-0.7
2,047,051	+				-0.4
2,047,052	-				+0.4
2,047,052	-				+0.4
2,047,230	+	argC	OKGIIK_09435	0.21	+0.5
2,047,231	-	argC	OKGIIK_09435	0.21	+0.1
2,047,255	+	argC	OKGIIK_09435	0.24	-1.4
2,047,255	+	argC	OKGIIK_09435	0.24	-0.2
2,047,255	+	argC	OKGIIK_09435	0.24	+1.6
2,047,255	+	argC	OKGIIK_09435	0.24	+1.3
2,047,255	+	argC	OKGIIK_09435	0.24	+0.8
2,047,256	-	argC	OKGIIK_09435	0.24	-0.4
2,047,309	+	argC	OKGIIK_09435	0.29	+0.4
2,047,309	+	argC	OKGIIK_09435	0.29	-0.3
2,047,309	+	argC	OKGIIK_09435	0.29	+0.6
2,047,309	+	argC	OKGIIK_09435	0.29	-0.4
2,047,309	+	argC	OKGIIK_09435	0.29	+0.5
2,047,309	+	argC	OKGIIK_09435	0.29	-0.2
2,047,309	+	argC	OKGIIK_09435	0.29	-1.3
2,047,309	+	argC	OKGIIK_09435	0.29	+0.2
2,047,309	+	argC	OKGIIK_09435	0.29	-0.4
2,047,310	-	argC	OKGIIK_09435	0.30	-1.4
2,047,310	-	argC	OKGIIK_09435	0.30	-0.2
2,047,310	-	argC	OKGIIK_09435	0.30	+0.4
2,047,576	+	argC	OKGIIK_09435	0.57	+1.8
2,047,577	-	argC	OKGIIK_09435	0.57	+2.2
2,047,577	-	argC	OKGIIK_09435	0.57	-1.1
2,047,577	-	argC	OKGIIK_09435	0.57	-1.1
2,047,577	-	argC	OKGIIK_09435	0.57	+0.1
2,047,642	+	argC	OKGIIK_09435	0.64	-1.7
2,047,643	-	argC	OKGIIK_09435	0.64	+0.4
2,047,643	-	argC	OKGIIK_09435	0.64	+0.8
2,047,645	+	argC	OKGIIK_09435	0.64	-0.2
2,047,645	+	argC	OKGIIK_09435	0.64	+0.4
2,047,645	+	argC	OKGIIK_09435	0.64	-1.8
2,047,646	-	argC	OKGIIK_09435	0.65	+0.5
2,047,646	-	argC	OKGIIK_09435	0.65	+0.4
2,047,646	-	argC	OKGIIK_09435	0.65	+0.1
2,047,646	-	argC	OKGIIK_09435	0.65	+0.8
2,047,646	-	argC	OKGIIK_09435	0.65	-0.2
2,047,646	-	argC	OKGIIK_09435	0.65	+0.1
2,047,646	-	argC	OKGIIK_09435	0.65	+0.7
2,047,666	+	argC	OKGIIK_09435	0.67	-1.1
2,048,025	+				-1.5
2,048,025	+				-1.2
2,048,025	+				-0.6
2,048,025	+				-0.6
2,048,026	-				-1.4
2,048,026	-				+1.0
2,048,177	+				+1.0
2,048,177	+				+1.1
2,048,177	+				-0.2
2,048,177	+				-0.6
2,048,177	+				-0.6
2,048,177	+				-1.5
2,048,178	-				+0.1
2,048,178	-				-1.9
2,048,178	-				-0.7
2,048,178	-				+1.0
2,048,180	+				-1.1
2,048,180	+				+0.7
2,048,180	+				+1.3
2,048,181	-	argB	OKGIIK_09440	0.10	-0.2
2,048,181	-	argB	OKGIIK_09440	0.10	-1.3
2,048,181	-	argB	OKGIIK_09440	0.10	+1.3
2,048,181	-	argB	OKGIIK_09440	0.10	+1.0
2,048,312	+	argB	OKGIIK_09440	0.20	+2.1
2,048,312	+	argB	OKGIIK_09440	0.20	-0.9
2,048,312	+	argB	OKGIIK_09440	0.20	+1.1
2,048,313	-	argB	OKGIIK_09440	0.20	+1.4
2,048,369	+	argB	OKGIIK_09440	0.24	-0.7
2,048,369	+	argB	OKGIIK_09440	0.24	+0.1
2,048,370	-	argB	OKGIIK_09440	0.24	-2.5
2,048,370	-	argB	OKGIIK_09440	0.24	-0.2
2,048,370	-	argB	OKGIIK_09440	0.24	-0.3
2,048,370	-	argB	OKGIIK_09440	0.24	+0.2
2,048,384	+	argB	OKGIIK_09440	0.25	-2.2
2,048,384	+	argB	OKGIIK_09440	0.25	+0.1
2,048,384	+	argB	OKGIIK_09440	0.25	-0.4
2,048,384	+	argB	OKGIIK_09440	0.25	-2.3
2,048,384	+	argB	OKGIIK_09440	0.25	+1.4
2,048,384	+	argB	OKGIIK_09440	0.25	-0.4
2,048,384	+	argB	OKGIIK_09440	0.25	-0.6
2,048,385	-	argB	OKGIIK_09440	0.25	+0.8
2,048,385	-	argB	OKGIIK_09440	0.25	+0.4
2,048,414	+	argB	OKGIIK_09440	0.27	+1.4
2,048,414	+	argB	OKGIIK_09440	0.27	+0.4
2,048,415	-	argB	OKGIIK_09440	0.28	+0.4
2,048,415	-	argB	OKGIIK_09440	0.28	+1.3
2,048,771	+	argB	OKGIIK_09440	0.54	-0.2
2,048,771	+	argB	OKGIIK_09440	0.54	+1.2
2,048,771	+	argB	OKGIIK_09440	0.54	-0.2
2,048,771	+	argB	OKGIIK_09440	0.54	+0.1
2,048,772	-	argB	OKGIIK_09440	0.54	+1.2
2,048,772	-	argB	OKGIIK_09440	0.54	+1.2
2,048,772	-	argB	OKGIIK_09440	0.54	+2.6
2,048,957	+	argB	OKGIIK_09440	0.68	+1.4
2,048,958	-	argB	OKGIIK_09440	0.68	-0.1
2,048,958	-	argB	OKGIIK_09440	0.68	+0.4
2,048,958	-	argB	OKGIIK_09440	0.68	+0.4
2,048,958	-	argB	OKGIIK_09440	0.68	-1.6
2,048,958	-	argB	OKGIIK_09440	0.68	-0.5
2,048,958	-	argB	OKGIIK_09440	0.68	+0.7
2,048,958	-	argB	OKGIIK_09440	0.68	+0.4
2,048,958	-	argB	OKGIIK_09440	0.68	-1.2
2,048,958	-	argB	OKGIIK_09440	0.68	-0.1
2,049,302	+				-0.2
2,049,302	+				+0.1
2,049,302	+				-2.0
2,049,303	-				-0.8
2,049,303	-				+1.4
2,049,303	-				+0.1
2,049,303	-				-0.8
2,049,303	-				+0.4
2,049,303	-				-3.1
2,049,303	-				+1.0
2,049,303	-				+0.1
2,049,385	+				+1.4
2,049,385	+				-0.6
2,049,385	+				+1.0
2,049,385	+				-0.4
2,049,386	-				-0.4
2,049,386	-				+1.4
2,049,386	-				-1.2
2,049,478	+				-0.1
2,049,479	-				+1.1
2,049,479	-				+2.0
2,049,548	-		OKGIIK_09445	0.13	-0.2
2,050,096	+		OKGIIK_09445	0.61	-1.1
2,050,096	+		OKGIIK_09445	0.61	-0.6
2,050,096	+		OKGIIK_09445	0.61	+0.4
2,050,097	-		OKGIIK_09445	0.61	-1.1
2,050,097	-		OKGIIK_09445	0.61	-1.7
2,050,097	-		OKGIIK_09445	0.61	-0.4
2,050,097	-		OKGIIK_09445	0.61	-0.4
2,050,097	-		OKGIIK_09445	0.61	+0.1
2,050,097	-		OKGIIK_09445	0.61	-0.4
2,050,097	-		OKGIIK_09445	0.61	-1.5