Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_09365

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,031,611	+		OKGIIK_09355	0.81	+0.5
2,031,611	+		OKGIIK_09355	0.81	-2.3
2,031,611	+		OKGIIK_09355	0.81	+0.4
2,031,611	+		OKGIIK_09355	0.81	-1.7
2,031,611	+		OKGIIK_09355	0.81	+0.4
2,031,611	+		OKGIIK_09355	0.81	-0.2
2,031,611	+		OKGIIK_09355	0.81	-0.5
2,031,611	+		OKGIIK_09355	0.81	-1.3
2,031,611	+		OKGIIK_09355	0.81	-0.7
2,031,612	-		OKGIIK_09355	0.81	-1.3
2,031,612	-		OKGIIK_09355	0.81	+0.3
2,031,612	-		OKGIIK_09355	0.81	+2.1
2,031,612	-		OKGIIK_09355	0.81	-1.1
2,031,713	+				+0.9
2,031,713	+				-0.9
2,031,713	+				-0.8
2,031,713	+				+0.6
2,031,713	+				-0.5
2,031,714	-				-0.5
2,031,714	-				-1.9
2,031,714	-				-0.7
2,031,786	+				-0.6
2,031,786	+				+0.1
2,031,786	+				+0.6
2,031,786	+				+0.2
2,031,787	-				-1.1
2,031,787	-				-0.8
2,031,787	-				+1.7
2,031,787	-				-1.6
2,031,924	+	mnaT	OKGIIK_09360	0.33	+0.9
2,031,924	+	mnaT	OKGIIK_09360	0.33	+1.0
2,031,924	+	mnaT	OKGIIK_09360	0.33	+0.1
2,031,924	+	mnaT	OKGIIK_09360	0.33	+0.6
2,031,924	+	mnaT	OKGIIK_09360	0.33	+0.1
2,031,924	+	mnaT	OKGIIK_09360	0.33	-0.2
2,031,925	-	mnaT	OKGIIK_09360	0.33	-0.2
2,031,930	+	mnaT	OKGIIK_09360	0.34	+0.1
2,031,930	+	mnaT	OKGIIK_09360	0.34	+1.0
2,031,930	+	mnaT	OKGIIK_09360	0.34	+0.5
2,031,960	+	mnaT	OKGIIK_09360	0.39	-0.6
2,031,960	+	mnaT	OKGIIK_09360	0.39	-0.8
2,031,987	+	mnaT	OKGIIK_09360	0.44	+0.3
2,031,987	+	mnaT	OKGIIK_09360	0.44	-1.6
2,031,987	+	mnaT	OKGIIK_09360	0.44	-0.2
2,031,987	+	mnaT	OKGIIK_09360	0.44	-0.6
2,031,987	+	mnaT	OKGIIK_09360	0.44	-0.7
2,031,987	+	mnaT	OKGIIK_09360	0.44	+1.1
2,031,987	+	mnaT	OKGIIK_09360	0.44	+0.5
2,031,987	+	mnaT	OKGIIK_09360	0.44	-0.1
2,031,988	-	mnaT	OKGIIK_09360	0.44	+1.4
2,031,988	-	mnaT	OKGIIK_09360	0.44	+0.1
2,031,988	-	mnaT	OKGIIK_09360	0.44	-0.2
2,031,988	-	mnaT	OKGIIK_09360	0.44	-0.4
2,031,988	-	mnaT	OKGIIK_09360	0.44	-1.7
2,031,988	-	mnaT	OKGIIK_09360	0.44	-0.8
2,031,988	-	mnaT	OKGIIK_09360	0.44	+0.2
2,031,988	-	mnaT	OKGIIK_09360	0.44	+0.4
2,031,988	-	mnaT	OKGIIK_09360	0.44	-0.2
2,032,032	+	mnaT	OKGIIK_09360	0.52	+0.3
2,032,033	-	mnaT	OKGIIK_09360	0.52	-1.2
2,032,033	-	mnaT	OKGIIK_09360	0.52	-1.4
2,032,033	-	mnaT	OKGIIK_09360	0.52	-0.8
2,032,170	+	mnaT	OKGIIK_09360	0.77	-0.6
2,032,170	+	mnaT	OKGIIK_09360	0.77	-0.9
2,032,170	+	mnaT	OKGIIK_09360	0.77	-0.2
2,032,170	+	mnaT	OKGIIK_09360	0.77	-0.5
2,032,170	+	mnaT	OKGIIK_09360	0.77	+1.2
2,032,171	-	mnaT	OKGIIK_09360	0.77	-1.1
2,032,171	-	mnaT	OKGIIK_09360	0.77	-0.6
2,032,171	-	mnaT	OKGIIK_09360	0.77	+1.8
2,032,171	-	mnaT	OKGIIK_09360	0.77	-0.6
2,032,171	-	mnaT	OKGIIK_09360	0.77	-0.6
2,032,171	-	mnaT	OKGIIK_09360	0.77	-2.9
2,032,171	-	mnaT	OKGIIK_09360	0.77	-0.2
2,032,272	-				+1.4
2,032,377	+				+1.3
2,032,377	+				+2.1
2,032,378	-				+0.5
2,032,431	+		OKGIIK_09365	0.11	+3.3
2,032,432	-		OKGIIK_09365	0.11	+5.1
2,032,432	-		OKGIIK_09365	0.11	+4.8
2,032,488	+		OKGIIK_09365	0.22	+5.1
2,032,488	+		OKGIIK_09365	0.22	+6.0
2,032,488	+		OKGIIK_09365	0.22	+5.3
2,032,488	+		OKGIIK_09365	0.22	+5.7
2,032,488	+		OKGIIK_09365	0.22	+4.4
2,032,488	+		OKGIIK_09365	0.22	+3.7
2,032,488	+		OKGIIK_09365	0.22	+5.2
2,032,488	+		OKGIIK_09365	0.22	+4.7
2,032,489	-		OKGIIK_09365	0.23	+5.1
2,032,489	-		OKGIIK_09365	0.23	+5.5
2,032,489	-		OKGIIK_09365	0.23	+6.2
2,032,489	-		OKGIIK_09365	0.23	+5.2
2,032,489	-		OKGIIK_09365	0.23	+5.7
2,032,489	-		OKGIIK_09365	0.23	+6.2
2,032,512	+		OKGIIK_09365	0.27	+5.2
2,032,512	+		OKGIIK_09365	0.27	+5.7
2,032,513	-		OKGIIK_09365	0.27	+5.9
2,032,513	-		OKGIIK_09365	0.27	+6.5
2,032,513	-		OKGIIK_09365	0.27	+4.7
2,032,513	-		OKGIIK_09365	0.27	+5.9
2,032,513	-		OKGIIK_09365	0.27	+6.3
2,032,527	+		OKGIIK_09365	0.30	+4.8
2,032,527	+		OKGIIK_09365	0.30	+5.7
2,032,527	+		OKGIIK_09365	0.30	+6.4
2,032,528	-		OKGIIK_09365	0.30	+6.5
2,032,528	-		OKGIIK_09365	0.30	+6.1
2,032,542	+		OKGIIK_09365	0.33	+6.2
2,032,543	-		OKGIIK_09365	0.33	+5.0
2,032,543	-		OKGIIK_09365	0.33	+5.8
2,032,557	+		OKGIIK_09365	0.36	+5.4
2,032,557	+		OKGIIK_09365	0.36	+6.0
2,032,557	+		OKGIIK_09365	0.36	+5.9
2,032,557	+		OKGIIK_09365	0.36	+6.6
2,032,557	+		OKGIIK_09365	0.36	+6.3
2,032,557	+		OKGIIK_09365	0.36	+4.5
2,032,557	+		OKGIIK_09365	0.36	+5.6
2,032,557	+		OKGIIK_09365	0.36	+6.9
2,032,557	+		OKGIIK_09365	0.36	+5.7
2,032,557	+		OKGIIK_09365	0.36	+6.3
2,032,557	+		OKGIIK_09365	0.36	+6.6
2,032,557	+		OKGIIK_09365	0.36	+5.7
2,032,557	+		OKGIIK_09365	0.36	+4.8
2,032,557	+		OKGIIK_09365	0.36	+5.8
2,032,557	+		OKGIIK_09365	0.36	+6.0
2,032,557	+		OKGIIK_09365	0.36	+4.3
2,032,557	+		OKGIIK_09365	0.36	+5.3
2,032,557	+		OKGIIK_09365	0.36	+6.0
2,032,558	-		OKGIIK_09365	0.36	+6.1
2,032,558	-		OKGIIK_09365	0.36	+5.9
2,032,558	-		OKGIIK_09365	0.36	+6.9
2,032,558	-		OKGIIK_09365	0.36	+6.8
2,032,558	-		OKGIIK_09365	0.36	+5.3
2,032,558	-		OKGIIK_09365	0.36	+7.0
2,032,558	-		OKGIIK_09365	0.36	+5.5
2,032,558	-		OKGIIK_09365	0.36	+6.0
2,032,558	-		OKGIIK_09365	0.36	+4.4
2,032,558	-		OKGIIK_09365	0.36	+5.8
2,032,558	-		OKGIIK_09365	0.36	+4.7
2,032,558	-		OKGIIK_09365	0.36	+6.3
2,032,558	-		OKGIIK_09365	0.36	+4.3
2,032,558	-		OKGIIK_09365	0.36	+6.1
2,032,558	-		OKGIIK_09365	0.36	+5.7
2,032,558	-		OKGIIK_09365	0.36	+6.2
2,032,558	-		OKGIIK_09365	0.36	+6.4
2,032,558	-		OKGIIK_09365	0.36	+5.1
2,032,558	-		OKGIIK_09365	0.36	+5.6
2,032,558	-		OKGIIK_09365	0.36	+6.4
2,032,558	-		OKGIIK_09365	0.36	+3.9
2,032,558	-		OKGIIK_09365	0.36	+6.1
2,032,558	-		OKGIIK_09365	0.36	+5.6
2,032,558	-		OKGIIK_09365	0.36	+5.5
2,032,558	-		OKGIIK_09365	0.36	+6.0
2,032,558	-		OKGIIK_09365	0.36	+5.6
2,032,558	-		OKGIIK_09365	0.36	+5.5
2,032,596	+		OKGIIK_09365	0.44	+4.6
2,032,596	+		OKGIIK_09365	0.44	+4.8
2,032,596	+		OKGIIK_09365	0.44	+7.0
2,032,596	+		OKGIIK_09365	0.44	+4.7
2,032,596	+		OKGIIK_09365	0.44	+6.1
2,032,596	+		OKGIIK_09365	0.44	+6.0
2,032,596	+		OKGIIK_09365	0.44	+6.6
2,032,596	+		OKGIIK_09365	0.44	+5.9
2,032,596	+		OKGIIK_09365	0.44	+5.4
2,032,596	+		OKGIIK_09365	0.44	+5.6
2,032,597	-		OKGIIK_09365	0.44	+6.4
2,032,597	-		OKGIIK_09365	0.44	+5.3
2,032,597	-		OKGIIK_09365	0.44	+4.9
2,032,597	-		OKGIIK_09365	0.44	+5.4
2,032,597	-		OKGIIK_09365	0.44	+6.1
2,032,597	-		OKGIIK_09365	0.44	+6.1
2,032,597	-		OKGIIK_09365	0.44	+6.0
2,032,597	-		OKGIIK_09365	0.44	+6.6
2,032,597	-		OKGIIK_09365	0.44	+5.6
2,032,597	-		OKGIIK_09365	0.44	+6.1
2,032,597	-		OKGIIK_09365	0.44	+6.4
2,032,597	-		OKGIIK_09365	0.44	+6.6
2,032,597	-		OKGIIK_09365	0.44	+4.9
2,032,597	-		OKGIIK_09365	0.44	+5.8
2,032,597	-		OKGIIK_09365	0.44	+6.5
2,032,597	-		OKGIIK_09365	0.44	+6.4
2,032,597	-		OKGIIK_09365	0.44	+5.7
2,032,597	-		OKGIIK_09365	0.44	+5.7
2,032,597	-		OKGIIK_09365	0.44	+7.1
2,032,597	-		OKGIIK_09365	0.44	+4.9
2,032,605	+		OKGIIK_09365	0.46	+7.0
2,032,605	+		OKGIIK_09365	0.46	+4.7
2,032,605	+		OKGIIK_09365	0.46	+5.5
2,032,605	+		OKGIIK_09365	0.46	+5.0
2,032,605	+		OKGIIK_09365	0.46	+4.5
2,032,606	-		OKGIIK_09365	0.46	+5.7
2,032,606	-		OKGIIK_09365	0.46	+6.3
2,032,606	-		OKGIIK_09365	0.46	+6.8
2,032,662	+		OKGIIK_09365	0.57	+6.1
2,032,662	+		OKGIIK_09365	0.57	+4.9
2,032,662	+		OKGIIK_09365	0.57	+6.6
2,032,663	-		OKGIIK_09365	0.57	+6.5
2,032,663	-		OKGIIK_09365	0.57	+5.8
2,032,663	-		OKGIIK_09365	0.57	+5.2
2,032,663	-		OKGIIK_09365	0.57	+5.4
2,032,705	-		OKGIIK_09365	0.66	+6.5
2,032,752	+		OKGIIK_09365	0.75	+6.2
2,032,752	+		OKGIIK_09365	0.75	+5.1
2,032,753	-		OKGIIK_09365	0.75	+7.3
2,032,753	-		OKGIIK_09365	0.75	+5.7
2,032,753	-		OKGIIK_09365	0.75	+5.7
2,032,753	-		OKGIIK_09365	0.75	+3.7
2,032,753	-		OKGIIK_09365	0.75	+6.3
2,032,753	-		OKGIIK_09365	0.75	+2.6
2,032,865	+				+5.9
2,032,865	+				+6.6
2,032,865	+				+6.3
2,032,865	+				+5.8
2,032,865	+				+6.5
2,032,865	+				+5.4
2,032,865	+				+4.4
2,032,865	+				+6.5
2,032,865	+				+5.8
2,032,865	+				+7.0
2,032,866	-				+5.9
2,032,866	-				+5.1
2,032,866	-				+1.6
2,032,866	-				+3.4
2,032,866	-				+5.6
2,032,866	-				+5.4
2,032,866	-				+6.0
2,032,866	-				+6.1
2,032,866	-				+5.4
2,032,866	-				+6.6
2,032,866	-				+5.4
2,032,866	-				+5.4
2,033,061	-				+0.3
2,033,074	+				+0.0
2,033,075	-				-0.2
2,033,075	-				-1.0
2,033,528	+	fabG	OKGIIK_09370	0.59	-1.2
2,033,528	+	fabG	OKGIIK_09370	0.59	-0.6
2,033,529	-	fabG	OKGIIK_09370	0.59	-1.0
2,033,529	-	fabG	OKGIIK_09370	0.59	+0.1
2,033,555	+	fabG	OKGIIK_09370	0.62	-0.8
2,033,555	+	fabG	OKGIIK_09370	0.62	+1.2
2,033,555	+	fabG	OKGIIK_09370	0.62	-0.5
2,033,555	+	fabG	OKGIIK_09370	0.62	-0.9
2,033,556	-	fabG	OKGIIK_09370	0.63	+0.3
2,033,786	+				+0.4
2,033,786	+				+1.4
2,033,787	-				-0.6
2,033,787	-				-0.9
2,033,787	-				+0.4
2,033,787	-				-1.9
2,033,840	+				-0.2
2,033,840	+				-0.9
2,033,840	+				+0.1
2,033,840	+				+0.1
2,033,840	+				-0.4
2,033,840	+				+0.2
2,033,840	+				+0.4
2,033,840	+				-0.7
2,033,840	+				+1.6
2,033,840	+				-0.3
2,033,840	+				+1.2
2,033,841	-				+1.7
2,033,841	-				+1.5
2,033,841	-				+0.5
2,033,841	-				+0.1
2,033,841	-				-2.0
2,033,841	-				-0.4
2,033,841	-				+1.0
2,033,841	-				-0.6
2,033,841	-				+2.0
2,033,841	-				+0.4
2,033,841	-				-0.5
2,033,841	-				-0.9