Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_08765

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,905,845	+		OKGIIK_08750	0.67	-0.4
1,905,845	+		OKGIIK_08750	0.67	-0.4
1,905,845	+		OKGIIK_08750	0.67	-2.2
1,905,845	+		OKGIIK_08750	0.67	-1.8
1,905,846	-		OKGIIK_08750	0.68	-1.2
1,905,897	+		OKGIIK_08750	0.78	-0.5
1,905,897	+		OKGIIK_08750	0.78	+0.0
1,905,897	+		OKGIIK_08750	0.78	-0.1
1,905,898	-		OKGIIK_08750	0.78	+0.6
1,905,898	-		OKGIIK_08750	0.78	-1.5
1,905,898	-		OKGIIK_08750	0.78	+0.6
1,905,942	+		OKGIIK_08750	0.88	+0.4
1,905,942	+		OKGIIK_08750	0.88	-2.0
1,905,942	+		OKGIIK_08750	0.88	+0.6
1,905,943	-		OKGIIK_08750	0.88	+0.6
1,905,945	+		OKGIIK_08750	0.88	-0.4
1,905,945	+		OKGIIK_08750	0.88	-0.4
1,905,945	+		OKGIIK_08750	0.88	+0.5
1,905,945	+		OKGIIK_08750	0.88	-2.4
1,905,945	+		OKGIIK_08750	0.88	+0.5
1,905,945	+		OKGIIK_08750	0.88	-1.1
1,905,945	+		OKGIIK_08750	0.88	-0.1
1,905,945	+		OKGIIK_08750	0.88	-1.7
1,905,946	-		OKGIIK_08750	0.88	-1.3
1,905,946	-		OKGIIK_08750	0.88	-1.9
1,905,946	-		OKGIIK_08750	0.88	-0.5
1,905,946	-		OKGIIK_08750	0.88	-1.2
1,905,946	-		OKGIIK_08750	0.88	-0.5
1,905,946	-		OKGIIK_08750	0.88	-1.0
1,905,967	+				-0.7
1,905,976	+				-0.8
1,906,033	+		OKGIIK_08755	0.16	+1.6
1,906,033	+		OKGIIK_08755	0.16	-2.4
1,906,033	+		OKGIIK_08755	0.16	+1.2
1,906,137	+		OKGIIK_08755	0.65	-0.7
1,906,137	+		OKGIIK_08755	0.65	+1.3
1,906,137	+		OKGIIK_08755	0.65	-0.2
1,906,137	+		OKGIIK_08755	0.65	-0.4
1,906,137	+		OKGIIK_08755	0.65	-2.2
1,906,137	+		OKGIIK_08755	0.65	-1.5
1,906,137	+		OKGIIK_08755	0.65	-2.1
1,906,138	-		OKGIIK_08755	0.66	-1.2
1,906,138	-		OKGIIK_08755	0.66	-1.8
1,906,268	+				-0.7
1,906,269	-				-1.2
1,906,583	+		OKGIIK_08760	0.59	-1.4
1,906,583	+		OKGIIK_08760	0.59	-1.2
1,906,583	+		OKGIIK_08760	0.59	+0.0
1,906,583	+		OKGIIK_08760	0.59	-1.7
1,906,583	+		OKGIIK_08760	0.59	-1.7
1,906,583	+		OKGIIK_08760	0.59	-1.0
1,906,583	+		OKGIIK_08760	0.59	-1.4
1,906,583	+		OKGIIK_08760	0.59	-2.1
1,906,584	-		OKGIIK_08760	0.59	-0.4
1,906,584	-		OKGIIK_08760	0.59	-0.5
1,906,584	-		OKGIIK_08760	0.59	-0.6
1,906,584	-		OKGIIK_08760	0.59	-0.6
1,906,584	-		OKGIIK_08760	0.59	+2.1
1,906,584	-		OKGIIK_08760	0.59	-1.0
1,906,584	-		OKGIIK_08760	0.59	-3.4
1,906,584	-		OKGIIK_08760	0.59	+0.4
1,906,584	-		OKGIIK_08760	0.59	-0.3
1,906,584	-		OKGIIK_08760	0.59	-2.4
1,906,584	-		OKGIIK_08760	0.59	-0.4
1,906,587	+		OKGIIK_08760	0.59	-2.2
1,906,587	+		OKGIIK_08760	0.59	-0.4
1,906,587	+		OKGIIK_08760	0.59	-2.4
1,906,587	+		OKGIIK_08760	0.59	+0.8
1,906,588	-		OKGIIK_08760	0.59	-1.4
1,906,588	-		OKGIIK_08760	0.59	-1.0
1,906,588	-		OKGIIK_08760	0.59	-1.8
1,906,588	-		OKGIIK_08760	0.59	+0.0
1,906,588	-		OKGIIK_08760	0.59	-0.4
1,906,679	+		OKGIIK_08760	0.74	-1.2
1,906,679	+		OKGIIK_08760	0.74	-1.4
1,906,679	+		OKGIIK_08760	0.74	-1.5
1,906,679	+		OKGIIK_08760	0.74	-0.7
1,906,680	-		OKGIIK_08760	0.74	+0.0
1,906,701	+		OKGIIK_08760	0.77	-0.7
1,906,701	+		OKGIIK_08760	0.77	+0.6
1,906,701	+		OKGIIK_08760	0.77	-0.4
1,906,701	+		OKGIIK_08760	0.77	-1.5
1,906,701	+		OKGIIK_08760	0.77	-0.9
1,906,701	+		OKGIIK_08760	0.77	-1.1
1,906,701	+		OKGIIK_08760	0.77	+0.0
1,906,701	+		OKGIIK_08760	0.77	-1.7
1,906,701	+		OKGIIK_08760	0.77	-2.2
1,906,701	+		OKGIIK_08760	0.77	-1.3
1,906,702	-		OKGIIK_08760	0.77	-1.2
1,906,702	-		OKGIIK_08760	0.77	-0.2
1,906,702	-		OKGIIK_08760	0.77	-0.6
1,906,702	-		OKGIIK_08760	0.77	-1.0
1,906,702	-		OKGIIK_08760	0.77	-0.4
1,906,752	+		OKGIIK_08760	0.85	-0.2
1,906,752	+		OKGIIK_08760	0.85	+0.4
1,906,752	+		OKGIIK_08760	0.85	+0.6
1,906,752	+		OKGIIK_08760	0.85	+0.8
1,906,752	+		OKGIIK_08760	0.85	-0.4
1,906,752	+		OKGIIK_08760	0.85	-1.0
1,906,753	-		OKGIIK_08760	0.85	-1.5
1,906,753	-		OKGIIK_08760	0.85	+0.0
1,906,808	+				-1.2
1,906,808	+				+0.6
1,906,808	+				-0.4
1,906,885	+		OKGIIK_08765	0.14	-0.7
1,906,886	-		OKGIIK_08765	0.14	-1.7
1,906,886	-		OKGIIK_08765	0.14	-1.2
1,906,886	-		OKGIIK_08765	0.14	-0.2
1,907,032	+		OKGIIK_08765	0.64	+0.0
1,907,032	+		OKGIIK_08765	0.64	-1.0
1,907,032	+		OKGIIK_08765	0.64	-1.1
1,907,033	-		OKGIIK_08765	0.65	-3.4
1,907,033	-		OKGIIK_08765	0.65	-1.2
1,907,033	-		OKGIIK_08765	0.65	+0.3
1,907,033	-		OKGIIK_08765	0.65	+0.9
1,907,033	-		OKGIIK_08765	0.65	-2.5
1,907,033	-		OKGIIK_08765	0.65	-1.5
1,907,033	-		OKGIIK_08765	0.65	+0.0
1,907,038	+		OKGIIK_08765	0.66	-0.7
1,907,039	-		OKGIIK_08765	0.67	-1.8
1,907,039	-		OKGIIK_08765	0.67	-1.7
1,907,156	+				-2.8
1,907,177	+				-0.7
1,907,217	-				+1.3
1,907,218	+				-1.3
1,907,218	+				-1.0
1,907,219	-				-1.0
1,907,255	+				-1.2
1,907,255	+				-0.4
1,907,255	+				-1.0
1,907,255	+				+0.3
1,907,255	+				-0.7
1,907,255	+				+0.4
1,907,255	+				-0.4
1,907,255	+				-2.4
1,907,255	+				-2.6
1,907,255	+				+0.0
1,907,256	-				-0.7
1,907,256	-				-2.4
1,907,256	-				-1.4
1,907,369	+		OKGIIK_08770	0.46	-0.4
1,907,369	+		OKGIIK_08770	0.46	-0.6
1,907,405	+		OKGIIK_08770	0.62	-1.1
1,907,405	+		OKGIIK_08770	0.62	-0.4
1,907,405	+		OKGIIK_08770	0.62	-0.7
1,907,405	+		OKGIIK_08770	0.62	-0.4
1,907,405	+		OKGIIK_08770	0.62	-1.4
1,907,405	+		OKGIIK_08770	0.62	-0.5
1,907,405	+		OKGIIK_08770	0.62	-1.3
1,907,486	+				-0.5
1,907,486	+				-2.2
1,907,486	+				-0.7
1,907,486	+				-0.4
1,907,487	-				-1.3
1,907,487	-				-1.5
1,907,524	+		OKGIIK_08775	0.25	-1.0
1,907,524	+		OKGIIK_08775	0.25	-0.7
1,907,524	+		OKGIIK_08775	0.25	-1.2
1,907,524	+		OKGIIK_08775	0.25	-0.8
1,907,524	+		OKGIIK_08775	0.25	-2.3
1,907,524	+		OKGIIK_08775	0.25	-1.8
1,907,650	+		OKGIIK_08775	0.79	-0.4
1,907,662	+		OKGIIK_08775	0.84	-1.7
1,907,662	+		OKGIIK_08775	0.84	-0.4
1,907,662	+		OKGIIK_08775	0.84	-1.2
1,907,695	+				+0.6
1,907,695	+				-1.5
1,907,696	-				-1.8
1,907,942	+		OKGIIK_08780	0.52	-1.4
1,907,942	+		OKGIIK_08780	0.52	-1.8
1,907,942	+		OKGIIK_08780	0.52	-3.0
1,907,942	+		OKGIIK_08780	0.52	-0.5
1,907,942	+		OKGIIK_08780	0.52	-1.0
1,907,942	+		OKGIIK_08780	0.52	-1.1
1,907,942	+		OKGIIK_08780	0.52	-0.7
1,907,942	+		OKGIIK_08780	0.52	+0.9
1,907,942	+		OKGIIK_08780	0.52	-0.3
1,907,942	+		OKGIIK_08780	0.52	-1.0
1,907,942	+		OKGIIK_08780	0.52	-1.4
1,907,943	-		OKGIIK_08780	0.52	-0.8
1,907,943	-		OKGIIK_08780	0.52	-1.8
1,907,943	-		OKGIIK_08780	0.52	-0.7
1,907,943	-		OKGIIK_08780	0.52	-3.5
1,907,943	-		OKGIIK_08780	0.52	-1.2
1,907,943	-		OKGIIK_08780	0.52	-0.4
1,908,023	+		OKGIIK_08780	0.68	-0.4
1,908,087	-		OKGIIK_08780	0.82	-1.0