Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_08500

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,861,442	-		OKGIIK_08495	0.53	-0.8
1,861,833	+				+0.4
1,861,833	+				-0.8
1,861,833	+				-0.1
1,861,833	+				-0.2
1,861,834	-				+0.4
1,861,943	-				+0.0
1,861,943	-				+0.5
1,861,943	-				+0.5
1,862,003	-				-1.8
1,862,003	-				+0.4
1,862,003	-				-0.2
1,862,003	-				-1.0
1,862,273	+				-0.5
1,862,273	+				+0.4
1,862,273	+				-1.2
1,862,273	+				-0.5
1,862,273	+				+1.8
1,862,273	+				+0.4
1,862,273	+				+2.4
1,862,274	-				-0.3
1,862,274	-				-0.2
1,862,274	-				-1.1
1,862,274	-				-0.2
1,862,274	-				+1.6
1,862,274	-				-0.4
1,862,345	+				+1.4
1,862,345	+				+1.7
1,862,346	-				-1.2
1,862,346	-				-0.4
1,862,346	-				-0.9
1,862,346	-				+2.4
1,862,346	-				-0.9
1,862,346	-				-0.6
1,862,449	+		OKGIIK_08500	0.19	-1.7
1,862,449	+		OKGIIK_08500	0.19	+0.9
1,862,913	+				-2.1
1,862,913	+				-0.1
1,862,923	+				-1.7
1,862,923	+				+0.1
1,863,277	+		OKGIIK_08505	0.78	+0.9
1,863,289	+		OKGIIK_08505	0.80	-1.1
1,863,289	+		OKGIIK_08505	0.80	+0.1
1,863,290	-		OKGIIK_08505	0.80	+2.1
1,863,290	-		OKGIIK_08505	0.80	-0.0
1,863,290	-		OKGIIK_08505	0.80	+1.2
1,863,290	-		OKGIIK_08505	0.80	+0.6
1,863,290	-		OKGIIK_08505	0.80	+0.4
1,863,290	-		OKGIIK_08505	0.80	+1.1
1,863,512	+		OKGIIK_08510	0.16	+0.4
1,863,512	+		OKGIIK_08510	0.16	+1.6
1,863,513	-		OKGIIK_08510	0.16	+1.4
1,863,513	-		OKGIIK_08510	0.16	-1.9
1,863,513	-		OKGIIK_08510	0.16	+2.2
1,863,513	-		OKGIIK_08510	0.16	+0.1
1,863,513	-		OKGIIK_08510	0.16	-0.8
1,863,513	-		OKGIIK_08510	0.16	-1.8
1,863,513	-		OKGIIK_08510	0.16	-0.2
1,863,513	-		OKGIIK_08510	0.16	-0.1
1,863,513	-		OKGIIK_08510	0.16	-0.2
1,863,518	+		OKGIIK_08510	0.17	+1.5
1,863,519	-		OKGIIK_08510	0.17	-1.1
1,863,530	+		OKGIIK_08510	0.19	+0.4
1,863,531	-		OKGIIK_08510	0.19	+0.4