Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_08335

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,829,072	+				+5.6
1,829,107	+				-0.8
1,829,107	+				-0.8
1,829,107	+				+0.4
1,829,107	+				-0.1
1,829,107	+				-0.6
1,829,107	+				+0.4
1,829,107	+				+2.0
1,829,107	+				-0.2
1,829,107	+				-0.1
1,829,107	+				-1.7
1,829,107	+				+0.7
1,829,108	-				-1.8
1,829,108	-				+1.7
1,829,108	-				-1.1
1,829,108	-				+0.2
1,829,108	-				-1.1
1,829,108	-				+0.6
1,829,108	-				+1.7
1,829,108	-				+0.5
1,829,108	-				-0.2
1,829,165	+				-0.4
1,829,165	+				-1.7
1,829,165	+				-0.8
1,829,165	+				+0.1
1,829,166	-				-0.9
1,829,176	+				-1.4
1,829,176	+				+1.7
1,829,224	+				+0.7
1,829,225	-				+0.2
1,829,225	-				+1.4
1,829,386	+				-0.4
1,829,387	-				+1.4
1,829,387	-				-0.6
1,829,387	-				-1.6
1,829,387	-				-0.0
1,829,757	-		OKGIIK_08335	0.54	+1.1
1,829,757	-		OKGIIK_08335	0.54	+0.1
1,829,766	-		OKGIIK_08335	0.56	-0.2
1,829,843	+		OKGIIK_08335	0.68	-1.9
1,829,843	+		OKGIIK_08335	0.68	+0.6
1,829,843	+		OKGIIK_08335	0.68	-0.8
1,829,843	+		OKGIIK_08335	0.68	+1.1
1,829,843	+		OKGIIK_08335	0.68	+6.7
1,829,844	-		OKGIIK_08335	0.68	-0.1
1,829,844	-		OKGIIK_08335	0.68	+0.1
1,829,844	-		OKGIIK_08335	0.68	+0.4
1,829,876	+		OKGIIK_08335	0.73	-0.4
1,829,876	+		OKGIIK_08335	0.73	+0.1
1,829,876	+		OKGIIK_08335	0.73	+0.6
1,829,876	+		OKGIIK_08335	0.73	+0.8
1,829,876	+		OKGIIK_08335	0.73	+1.2
1,829,877	-		OKGIIK_08335	0.74	+0.8
1,829,877	-		OKGIIK_08335	0.74	-0.9
1,829,912	+		OKGIIK_08335	0.79	+0.6
1,829,912	+		OKGIIK_08335	0.79	-1.2
1,829,987	+				+0.4
1,830,125	+				+1.1
1,830,125	+				+0.6
1,830,125	+				+0.2
1,830,125	+				+0.6
1,830,126	-				-0.4
1,830,126	-				+1.1
1,830,126	-				-0.2
1,830,343	+				+1.7
1,830,343	+				-0.4
1,830,343	+				+2.0
1,830,343	+				-0.3
1,830,343	+				-0.9
1,830,343	+				-1.4
1,830,344	-				+0.1
1,830,344	-				+0.5
1,830,344	-				+0.4
1,830,344	-				-0.4
1,830,401	-				-0.4
1,830,477	+				-0.6
1,830,477	+				-1.2
1,830,477	+				-1.3
1,830,477	+				+1.1
1,830,477	+				+1.1
1,830,477	+				-1.1
1,830,477	+				-1.5
1,830,477	+				-0.4
1,830,477	+				-1.2
1,830,477	+				-0.2
1,830,477	+				-2.0
1,830,478	-				-0.4
1,830,478	-				-1.7
1,830,478	-				+2.4
1,830,478	-				+0.8
1,830,478	-				-0.6
1,830,495	+				+1.0
1,830,495	+				-0.6
1,830,495	+				+0.4
1,830,495	+				+0.6
1,830,496	-				-0.6
1,830,496	-				+1.1
1,830,496	-				-0.3
1,830,496	-				+1.7
1,830,496	-				+0.2
1,830,504	+				-1.2
1,830,505	-				-0.9
1,830,528	+				-0.7
1,830,528	+				+0.5
1,830,529	-				-1.1
1,830,529	-				+1.5
1,830,529	-				+0.1
1,830,597	+		OKGIIK_08340	0.33	+1.1
1,830,597	+		OKGIIK_08340	0.33	-0.0
1,830,597	+		OKGIIK_08340	0.33	-0.4
1,830,597	+		OKGIIK_08340	0.33	-0.4
1,830,598	-		OKGIIK_08340	0.33	-0.0
1,830,636	+		OKGIIK_08340	0.47	-0.7
1,830,637	-		OKGIIK_08340	0.47	-0.4
1,830,734	+		OKGIIK_08340	0.81	-1.2
1,830,735	-		OKGIIK_08340	0.81	+1.2
1,830,735	-		OKGIIK_08340	0.81	-0.2
1,830,778	+				-2.6
1,830,780	+				+0.2
1,830,780	+				+0.7
1,830,780	+				-0.9
1,830,780	+				+0.4
1,830,780	+				+0.4
1,830,780	+				-1.4
1,830,780	+				-1.7
1,830,780	+				+0.5
1,830,780	+				-1.0
1,830,781	-				+2.4
1,830,781	-				-0.2
1,830,781	-				+0.2
1,830,781	-				+1.4
1,830,781	-				-1.1
1,830,781	-				-0.5
1,830,781	-				-1.3
1,830,781	-				+0.1
1,830,781	-				+0.4
1,830,781	-				-0.9
1,830,781	-				-1.2
1,830,781	-				-0.6
1,830,781	-				-0.8
1,830,781	-				+1.1
1,830,781	-				+0.4
1,830,781	-				+0.1
1,830,781	-				-0.4