Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_08250

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,815,163	+		OKGIIK_08245	0.56	+0.8
1,815,164	-		OKGIIK_08245	0.56	+0.9
1,815,287	-		OKGIIK_08245	0.62	+0.3
1,815,287	-		OKGIIK_08245	0.62	+0.2
1,815,325	+		OKGIIK_08245	0.64	-0.1
1,815,326	-		OKGIIK_08245	0.64	+1.1
1,815,334	+		OKGIIK_08245	0.64	+0.4
1,815,334	+		OKGIIK_08245	0.64	-0.9
1,815,334	+		OKGIIK_08245	0.64	+0.1
1,815,334	+		OKGIIK_08245	0.64	-0.6
1,815,334	+		OKGIIK_08245	0.64	-2.0
1,815,334	+		OKGIIK_08245	0.64	+0.4
1,815,334	+		OKGIIK_08245	0.64	+0.8
1,815,334	+		OKGIIK_08245	0.64	-0.2
1,815,334	+		OKGIIK_08245	0.64	+0.1
1,815,334	+		OKGIIK_08245	0.64	-1.2
1,815,335	-		OKGIIK_08245	0.64	+0.4
1,815,335	-		OKGIIK_08245	0.64	-0.6
1,815,335	-		OKGIIK_08245	0.64	+1.2
1,815,335	-		OKGIIK_08245	0.64	+0.1
1,815,335	-		OKGIIK_08245	0.64	-0.6
1,815,335	-		OKGIIK_08245	0.64	+0.8
1,815,335	-		OKGIIK_08245	0.64	+2.9
1,815,335	-		OKGIIK_08245	0.64	+1.2
1,815,335	-		OKGIIK_08245	0.64	+1.5
1,815,335	-		OKGIIK_08245	0.64	+0.1
1,815,443	+		OKGIIK_08245	0.69	-0.0
1,815,443	+		OKGIIK_08245	0.69	-0.4
1,815,443	+		OKGIIK_08245	0.69	-1.6
1,815,444	-		OKGIIK_08245	0.69	-0.4
1,815,444	-		OKGIIK_08245	0.69	-2.1
1,815,444	-		OKGIIK_08245	0.69	+0.0
1,815,487	+		OKGIIK_08245	0.71	+1.1
1,815,487	+		OKGIIK_08245	0.71	+1.7
1,815,488	-		OKGIIK_08245	0.71	+0.2
1,815,488	-		OKGIIK_08245	0.71	+1.8
1,815,563	-		OKGIIK_08245	0.74	+0.4
1,815,667	+		OKGIIK_08245	0.79	-1.2
1,815,668	-		OKGIIK_08245	0.79	-0.2
1,815,668	-		OKGIIK_08245	0.79	+0.1
1,815,668	-		OKGIIK_08245	0.79	-0.8
1,815,668	-		OKGIIK_08245	0.79	+0.3
1,815,673	+		OKGIIK_08245	0.79	+0.9
1,815,673	+		OKGIIK_08245	0.79	+0.4
1,815,673	+		OKGIIK_08245	0.79	-0.0
1,815,673	+		OKGIIK_08245	0.79	-0.1
1,815,673	+		OKGIIK_08245	0.79	-0.9
1,815,673	+		OKGIIK_08245	0.79	+0.5
1,815,673	+		OKGIIK_08245	0.79	-1.0
1,815,674	-		OKGIIK_08245	0.79	+0.6
1,815,674	-		OKGIIK_08245	0.79	-0.2
1,815,674	-		OKGIIK_08245	0.79	-1.9
1,815,674	-		OKGIIK_08245	0.79	-0.7
1,815,674	-		OKGIIK_08245	0.79	+0.6
1,815,674	-		OKGIIK_08245	0.79	+0.5
1,815,674	-		OKGIIK_08245	0.79	-0.2
1,815,674	-		OKGIIK_08245	0.79	+0.2
1,815,674	-		OKGIIK_08245	0.79	+0.1
1,815,674	-		OKGIIK_08245	0.79	-0.5
1,815,674	-		OKGIIK_08245	0.79	-0.2
1,815,674	-		OKGIIK_08245	0.79	-1.2
1,815,674	-		OKGIIK_08245	0.79	-0.1
1,815,674	-		OKGIIK_08245	0.79	-0.2
1,815,919	+				+0.1
1,815,919	+				-0.9
1,815,919	+				+0.4
1,815,919	+				-0.4
1,815,919	+				-0.0
1,815,920	-				+0.4
1,815,922	+				+0.4
1,815,922	+				+0.6
1,815,922	+				+0.4
1,815,922	+				-0.9
1,815,922	+				+0.6
1,815,923	-				-0.4
1,815,923	-				-0.8
1,815,923	-				+0.4
1,815,923	-				+0.1
1,815,923	-				-0.2
1,815,923	-				-1.1
1,815,923	-				+1.4
1,816,051	+				+0.3
1,816,052	-				-0.0
1,816,052	-				-1.1
1,816,052	-				-1.6
1,816,052	-				+0.1
1,816,078	+				-0.4
1,816,078	+				+0.2
1,816,078	+				-0.2
1,816,078	+				-0.7
1,816,078	+				-1.0
1,816,079	-				+0.1
1,816,079	-				-0.1
1,816,079	-				-0.6
1,816,079	-				-0.8
1,816,079	-				+0.8
1,816,079	-				-0.9
1,816,079	-				-1.3
1,816,120	+				-0.4
1,816,120	+				-0.4
1,816,120	+				+0.1
1,816,120	+				-0.1
1,816,121	-				+2.6
1,816,288	+		OKGIIK_08250	0.19	-0.2
1,816,288	+		OKGIIK_08250	0.19	-0.9
1,816,289	-		OKGIIK_08250	0.20	+4.6
1,816,289	-		OKGIIK_08250	0.20	+1.2
1,816,289	-		OKGIIK_08250	0.20	+0.4
1,816,289	-		OKGIIK_08250	0.20	-0.4
1,816,289	-		OKGIIK_08250	0.20	+0.8
1,816,289	-		OKGIIK_08250	0.20	-1.1
1,816,289	-		OKGIIK_08250	0.20	-0.4
1,816,532	+		OKGIIK_08250	0.53	+1.0
1,816,532	+		OKGIIK_08250	0.53	+0.9
1,816,533	-		OKGIIK_08250	0.53	-0.3
1,816,533	-		OKGIIK_08250	0.53	+0.9
1,816,533	-		OKGIIK_08250	0.53	-1.2
1,816,533	-		OKGIIK_08250	0.53	-0.2
1,816,636	+		OKGIIK_08250	0.67	+0.7
1,816,636	+		OKGIIK_08250	0.67	+0.4
1,816,636	+		OKGIIK_08250	0.67	-1.1
1,816,636	+		OKGIIK_08250	0.67	+0.7
1,816,636	+		OKGIIK_08250	0.67	+0.1
1,816,637	-		OKGIIK_08250	0.67	+0.4
1,816,637	-		OKGIIK_08250	0.67	+0.1
1,816,640	+		OKGIIK_08250	0.68	+0.4
1,816,640	+		OKGIIK_08250	0.68	+0.8
1,816,640	+		OKGIIK_08250	0.68	-0.6
1,816,640	+		OKGIIK_08250	0.68	+0.0
1,816,640	+		OKGIIK_08250	0.68	+0.3
1,816,640	+		OKGIIK_08250	0.68	-0.2
1,816,640	+		OKGIIK_08250	0.68	+0.8
1,816,640	+		OKGIIK_08250	0.68	-0.9
1,816,640	+		OKGIIK_08250	0.68	+0.6
1,816,641	-		OKGIIK_08250	0.68	-0.2
1,816,641	-		OKGIIK_08250	0.68	-0.7
1,816,641	-		OKGIIK_08250	0.68	+0.4
1,816,641	-		OKGIIK_08250	0.68	-1.9
1,816,641	-		OKGIIK_08250	0.68	-0.4
1,816,812	+				+0.8
1,817,133	+	wcaG	OKGIIK_08255	0.19	+1.0
1,817,133	+	wcaG	OKGIIK_08255	0.19	+0.1
1,817,133	+	wcaG	OKGIIK_08255	0.19	+0.1
1,817,134	-	wcaG	OKGIIK_08255	0.19	+0.3
1,817,395	+	wcaG	OKGIIK_08255	0.44	-1.1
1,817,395	+	wcaG	OKGIIK_08255	0.44	+0.3
1,817,395	+	wcaG	OKGIIK_08255	0.44	-0.2
1,817,395	+	wcaG	OKGIIK_08255	0.44	-0.8
1,817,395	+	wcaG	OKGIIK_08255	0.44	-0.9
1,817,395	+	wcaG	OKGIIK_08255	0.44	+0.9
1,817,396	-	wcaG	OKGIIK_08255	0.44	-2.3
1,817,396	-	wcaG	OKGIIK_08255	0.44	+0.4
1,817,396	-	wcaG	OKGIIK_08255	0.44	-0.9
1,817,396	-	wcaG	OKGIIK_08255	0.44	-0.4
1,817,396	-	wcaG	OKGIIK_08255	0.44	-0.6
1,817,396	-	wcaG	OKGIIK_08255	0.44	-2.2
1,817,396	-	wcaG	OKGIIK_08255	0.44	-1.1
1,817,396	-	wcaG	OKGIIK_08255	0.44	-1.7
1,817,396	-	wcaG	OKGIIK_08255	0.44	-0.6
1,817,396	-	wcaG	OKGIIK_08255	0.44	+0.4
1,817,518	+	wcaG	OKGIIK_08255	0.55	-0.9
1,817,518	+	wcaG	OKGIIK_08255	0.55	+0.1
1,817,518	+	wcaG	OKGIIK_08255	0.55	+0.2
1,817,518	+	wcaG	OKGIIK_08255	0.55	+1.4
1,817,519	-	wcaG	OKGIIK_08255	0.55	-0.2
1,817,519	-	wcaG	OKGIIK_08255	0.55	+0.9
1,817,519	-	wcaG	OKGIIK_08255	0.55	-0.4
1,817,519	-	wcaG	OKGIIK_08255	0.55	-1.1
1,817,519	-	wcaG	OKGIIK_08255	0.55	+0.3
1,817,752	+	wcaG	OKGIIK_08255	0.78	-0.0
1,817,752	+	wcaG	OKGIIK_08255	0.78	-1.2
1,817,752	+	wcaG	OKGIIK_08255	0.78	-1.7
1,817,752	+	wcaG	OKGIIK_08255	0.78	+0.4
1,817,752	+	wcaG	OKGIIK_08255	0.78	+0.2
1,817,752	+	wcaG	OKGIIK_08255	0.78	+0.4
1,817,752	+	wcaG	OKGIIK_08255	0.78	+0.5
1,817,753	-	wcaG	OKGIIK_08255	0.78	+0.1
1,817,753	-	wcaG	OKGIIK_08255	0.78	+0.6