Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_08115

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,784,479	+	ygaA	OKGIIK_08105	0.64	-0.5
1,784,479	+	ygaA	OKGIIK_08105	0.64	-0.8
1,784,479	+	ygaA	OKGIIK_08105	0.64	-0.7
1,784,480	-	ygaA	OKGIIK_08105	0.64	+0.8
1,784,480	-	ygaA	OKGIIK_08105	0.64	+0.6
1,784,480	-	ygaA	OKGIIK_08105	0.64	+0.5
1,784,480	-	ygaA	OKGIIK_08105	0.64	+0.9
1,784,480	-	ygaA	OKGIIK_08105	0.64	+0.1
1,784,480	-	ygaA	OKGIIK_08105	0.64	+1.1
1,784,480	-	ygaA	OKGIIK_08105	0.64	-0.6
1,784,480	-	ygaA	OKGIIK_08105	0.64	-0.6
1,784,480	-	ygaA	OKGIIK_08105	0.64	-0.1
1,784,480	-	ygaA	OKGIIK_08105	0.64	+0.4
1,784,480	-	ygaA	OKGIIK_08105	0.64	+0.6
1,784,480	-	ygaA	OKGIIK_08105	0.64	+0.5
1,784,629	+	ygaA	OKGIIK_08105	0.89	-1.4
1,784,629	+	ygaA	OKGIIK_08105	0.89	-1.4
1,784,629	+	ygaA	OKGIIK_08105	0.89	-0.3
1,784,629	+	ygaA	OKGIIK_08105	0.89	-1.4
1,784,629	+	ygaA	OKGIIK_08105	0.89	-2.1
1,784,629	+	ygaA	OKGIIK_08105	0.89	-1.4
1,784,629	+	ygaA	OKGIIK_08105	0.89	-0.2
1,784,630	-	ygaA	OKGIIK_08105	0.89	+1.3
1,784,630	-	ygaA	OKGIIK_08105	0.89	+0.4
1,784,630	-	ygaA	OKGIIK_08105	0.89	+1.1
1,784,630	-	ygaA	OKGIIK_08105	0.89	-2.1
1,784,630	-	ygaA	OKGIIK_08105	0.89	+0.2
1,784,630	-	ygaA	OKGIIK_08105	0.89	+0.1
1,784,630	-	ygaA	OKGIIK_08105	0.89	+1.6
1,784,630	-	ygaA	OKGIIK_08105	0.89	+1.2
1,784,630	-	ygaA	OKGIIK_08105	0.89	-0.2
1,784,630	-	ygaA	OKGIIK_08105	0.89	-0.4
1,784,630	-	ygaA	OKGIIK_08105	0.89	-1.9
1,784,630	-	ygaA	OKGIIK_08105	0.89	+0.4
1,784,630	-	ygaA	OKGIIK_08105	0.89	+0.9
1,784,630	-	ygaA	OKGIIK_08105	0.89	-1.4
1,784,632	+	ygaA	OKGIIK_08105	0.89	-0.6
1,784,632	+	ygaA	OKGIIK_08105	0.89	+0.5
1,784,632	+	ygaA	OKGIIK_08105	0.89	+0.2
1,784,632	+	ygaA	OKGIIK_08105	0.89	-0.2
1,784,632	+	ygaA	OKGIIK_08105	0.89	-1.3
1,784,632	+	ygaA	OKGIIK_08105	0.89	-0.4
1,784,632	+	ygaA	OKGIIK_08105	0.89	-0.4
1,784,632	+	ygaA	OKGIIK_08105	0.89	+2.0
1,784,632	+	ygaA	OKGIIK_08105	0.89	+1.3
1,784,632	+	ygaA	OKGIIK_08105	0.89	-0.2
1,784,632	+	ygaA	OKGIIK_08105	0.89	-0.2
1,784,632	+	ygaA	OKGIIK_08105	0.89	+0.4
1,784,632	+	ygaA	OKGIIK_08105	0.89	+0.8
1,784,633	-	ygaA	OKGIIK_08105	0.89	-0.2
1,784,633	-	ygaA	OKGIIK_08105	0.89	-0.2
1,784,633	-	ygaA	OKGIIK_08105	0.89	+2.2
1,784,633	-	ygaA	OKGIIK_08105	0.89	+0.1
1,784,633	-	ygaA	OKGIIK_08105	0.89	-0.9
1,784,633	-	ygaA	OKGIIK_08105	0.89	-0.1
1,784,633	-	ygaA	OKGIIK_08105	0.89	+0.2
1,784,633	-	ygaA	OKGIIK_08105	0.89	-0.2
1,784,633	-	ygaA	OKGIIK_08105	0.89	-1.8
1,784,633	-	ygaA	OKGIIK_08105	0.89	-0.1
1,784,633	-	ygaA	OKGIIK_08105	0.89	+0.5
1,784,633	-	ygaA	OKGIIK_08105	0.89	-0.8
1,784,633	-	ygaA	OKGIIK_08105	0.89	+0.4
1,784,633	-	ygaA	OKGIIK_08105	0.89	+0.8
1,784,633	-	ygaA	OKGIIK_08105	0.89	-0.3
1,784,633	-	ygaA	OKGIIK_08105	0.89	+1.4
1,784,633	-	ygaA	OKGIIK_08105	0.89	+0.6
1,784,633	-	ygaA	OKGIIK_08105	0.89	+0.4
1,784,674	+				+0.7
1,784,674	+				+0.2
1,784,674	+				-0.7
1,784,675	-				-0.4
1,784,675	-				-0.9
1,784,675	-				-0.4
1,784,675	-				-1.1
1,784,675	-				+0.4
1,784,675	-				+1.2
1,784,941	-	pcm	OKGIIK_08110	0.36	+0.8
1,785,195	+	pcm	OKGIIK_08110	0.73	+2.9
1,785,366	+				+1.8
1,785,367	-				+0.9
1,785,777	+	surE	OKGIIK_08115	0.50	+0.4
1,785,777	+	surE	OKGIIK_08115	0.50	-1.4
1,785,778	-	surE	OKGIIK_08115	0.50	+2.2
1,785,778	-	surE	OKGIIK_08115	0.50	+2.0
1,785,778	-	surE	OKGIIK_08115	0.50	-1.6
1,785,778	-	surE	OKGIIK_08115	0.50	+1.0
1,785,873	+	surE	OKGIIK_08115	0.62	+2.4
1,785,873	+	surE	OKGIIK_08115	0.62	+1.7
1,785,873	+	surE	OKGIIK_08115	0.62	-0.2
1,785,873	+	surE	OKGIIK_08115	0.62	+2.6
1,785,874	-	surE	OKGIIK_08115	0.62	+1.3
1,785,997	-	surE	OKGIIK_08115	0.77	-1.4
1,785,997	-	surE	OKGIIK_08115	0.77	+1.8
1,785,997	-	surE	OKGIIK_08115	0.77	+0.7
1,786,000	-	surE	OKGIIK_08115	0.78	+1.7
1,786,000	-	surE	OKGIIK_08115	0.78	-0.9
1,786,000	-	surE	OKGIIK_08115	0.78	+1.7
1,786,250	+				+0.6
1,786,292	-				-1.2
1,786,525	+	smrA	OKGIIK_08120	0.40	-1.4
1,786,525	+	smrA	OKGIIK_08120	0.40	+1.6
1,786,525	+	smrA	OKGIIK_08120	0.40	-1.8
1,786,525	+	smrA	OKGIIK_08120	0.40	-0.2
1,786,525	+	smrA	OKGIIK_08120	0.40	-1.5
1,786,525	+	smrA	OKGIIK_08120	0.40	-0.8
1,786,525	+	smrA	OKGIIK_08120	0.40	+0.4
1,786,526	-	smrA	OKGIIK_08120	0.41	+0.1
1,786,526	-	smrA	OKGIIK_08120	0.41	-0.5
1,786,838	+				-0.8
1,786,838	+				-0.0
1,786,838	+				-0.2
1,786,839	-				-0.1
1,786,839	-				-0.8
1,786,930	+				-1.6
1,786,930	+				-0.3
1,786,930	+				+0.4
1,786,930	+				-1.8
1,786,930	+				-0.4
1,786,930	+				+0.4
1,786,930	+				+0.9
1,786,931	-				-0.1
1,786,931	-				-0.2
1,786,931	-				+0.5
1,786,931	-				-0.3
1,786,931	-				-0.1
1,786,931	-				-1.4
1,786,944	+				-0.3
1,786,945	-				+2.0
1,787,143	+		OKGIIK_08125	0.39	+1.2
1,787,143	+		OKGIIK_08125	0.39	-0.1
1,787,144	-		OKGIIK_08125	0.39	-0.4
1,787,144	-		OKGIIK_08125	0.39	+0.1
1,787,144	-		OKGIIK_08125	0.39	-0.5