Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_07430

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,639,297	+		OKGIIK_07415	0.70	-1.1
1,639,297	+		OKGIIK_07415	0.70	-0.9
1,639,298	-		OKGIIK_07415	0.70	-0.3
1,639,298	-		OKGIIK_07415	0.70	+1.1
1,639,298	-		OKGIIK_07415	0.70	+2.0
1,639,360	+		OKGIIK_07415	0.80	-0.7
1,639,360	+		OKGIIK_07415	0.80	-1.3
1,639,360	+		OKGIIK_07415	0.80	-0.3
1,639,360	+		OKGIIK_07415	0.80	+0.7
1,639,360	+		OKGIIK_07415	0.80	-0.7
1,639,361	-		OKGIIK_07415	0.80	-2.6
1,639,361	-		OKGIIK_07415	0.80	-1.2
1,639,361	-		OKGIIK_07415	0.80	-1.1
1,639,493	+				+1.2
1,639,493	+				+0.1
1,639,493	+				-1.2
1,639,493	+				-1.3
1,639,493	+				-2.9
1,639,493	+				-0.8
1,639,493	+				-0.9
1,639,493	+				-1.1
1,639,493	+				-1.5
1,639,493	+				-3.5
1,639,493	+				-0.3
1,639,493	+				-0.9
1,639,493	+				-1.6
1,639,493	+				+0.9
1,639,494	-				-2.1
1,639,494	-				-0.9
1,639,494	-				-1.8
1,639,494	-				-1.3
1,639,494	-				-1.1
1,639,494	-				-0.8
1,639,494	-				+0.3
1,639,494	-				-0.9
1,639,494	-				-1.8
1,639,494	-				-1.5
1,639,494	-				-2.7
1,639,494	-				-2.6
1,639,494	-				-0.9
1,639,494	-				-4.2
1,639,494	-				-0.8
1,639,494	-				-0.3
1,639,526	+				-0.3
1,639,526	+				-1.4
1,639,526	+				-3.9
1,639,526	+				-1.7
1,639,526	+				-0.1
1,639,526	+				-1.5
1,639,527	-				+0.2
1,639,527	-				-0.7
1,639,708	-		OKGIIK_07420	0.16	-1.1
1,639,776	+		OKGIIK_07420	0.45	-0.7
1,639,776	+		OKGIIK_07420	0.45	-1.9
1,639,790	+		OKGIIK_07420	0.51	+0.7
1,639,790	+		OKGIIK_07420	0.51	-0.7
1,639,790	+		OKGIIK_07420	0.51	-0.8
1,639,790	+		OKGIIK_07420	0.51	+1.4
1,639,790	+		OKGIIK_07420	0.51	-1.7
1,639,790	+		OKGIIK_07420	0.51	-2.2
1,639,790	+		OKGIIK_07420	0.51	-0.7
1,639,790	+		OKGIIK_07420	0.51	-0.8
1,639,790	+		OKGIIK_07420	0.51	-3.0
1,639,790	+		OKGIIK_07420	0.51	+0.2
1,639,790	+		OKGIIK_07420	0.51	-0.4
1,639,790	+		OKGIIK_07420	0.51	-0.1
1,639,790	+		OKGIIK_07420	0.51	-1.8
1,639,790	+		OKGIIK_07420	0.51	-0.9
1,639,790	+		OKGIIK_07420	0.51	-1.2
1,639,790	+		OKGIIK_07420	0.51	-1.1
1,639,790	+		OKGIIK_07420	0.51	+0.7
1,639,790	+		OKGIIK_07420	0.51	-1.3
1,639,790	+		OKGIIK_07420	0.51	-0.7
1,639,790	+		OKGIIK_07420	0.51	+0.1
1,639,790	+		OKGIIK_07420	0.51	-2.1
1,639,790	+		OKGIIK_07420	0.51	+0.2
1,639,790	+		OKGIIK_07420	0.51	-1.2
1,639,790	+		OKGIIK_07420	0.51	-0.9
1,639,791	-		OKGIIK_07420	0.51	+1.2
1,639,791	-		OKGIIK_07420	0.51	-0.0
1,639,791	-		OKGIIK_07420	0.51	+1.2
1,639,791	-		OKGIIK_07420	0.51	-1.0
1,639,791	-		OKGIIK_07420	0.51	-0.6
1,639,791	-		OKGIIK_07420	0.51	-1.3
1,639,791	-		OKGIIK_07420	0.51	-1.8
1,639,791	-		OKGIIK_07420	0.51	-1.1
1,639,791	-		OKGIIK_07420	0.51	-1.5
1,639,791	-		OKGIIK_07420	0.51	+0.2
1,639,791	-		OKGIIK_07420	0.51	+0.1
1,639,791	-		OKGIIK_07420	0.51	+1.9
1,639,791	-		OKGIIK_07420	0.51	-1.7
1,639,791	-		OKGIIK_07420	0.51	-0.7
1,639,791	-		OKGIIK_07420	0.51	-2.1
1,639,791	-		OKGIIK_07420	0.51	-0.2
1,639,791	-		OKGIIK_07420	0.51	-0.9
1,639,852	-		OKGIIK_07420	0.77	+0.7
1,639,852	-		OKGIIK_07420	0.77	-1.1
1,639,897	+				-0.9
1,639,897	+				-0.7
1,639,897	+				-0.7
1,639,897	+				-1.4
1,639,897	+				-1.1
1,639,897	+				+0.8
1,639,898	-				-0.9
1,639,898	-				-0.7
1,639,898	-				-1.2
1,639,898	-				-2.3
1,639,898	-				-1.3
1,639,898	-				-0.7
1,639,898	-				-0.2
1,639,913	+				-0.9
1,639,913	+				-1.3
1,639,913	+				-1.5
1,639,913	+				-0.8
1,639,913	+				+1.7
1,639,913	+				-0.6
1,639,914	-				-0.9
1,639,914	-				-0.6
1,639,914	-				-2.0
1,639,914	-				+0.1
1,639,914	-				-0.8
1,639,914	-				+0.7
1,639,914	-				+0.3
1,639,914	-				-0.5
1,639,914	-				-0.7
1,639,914	-				-1.1
1,639,965	+				-2.0
1,639,965	+				-2.1
1,639,965	+				+0.1
1,639,965	+				-1.1
1,639,965	+				-0.7
1,639,965	+				-0.3
1,639,965	+				-0.1
1,639,965	+				-0.2
1,639,965	+				-0.9
1,639,965	+				-1.4
1,639,965	+				-1.1
1,639,965	+				-0.3
1,639,965	+				-1.7
1,639,965	+				-0.5
1,639,965	+				+1.7
1,639,965	+				+0.4
1,639,965	+				-1.5
1,639,965	+				-0.9
1,639,965	+				-2.1
1,639,965	+				-1.9
1,639,965	+				-1.4
1,639,965	+				-1.3
1,639,965	+				-0.5
1,639,966	-				-0.3
1,639,966	-				-1.8
1,639,966	-				+0.7
1,639,966	-				-0.9
1,639,966	-				-1.3
1,639,966	-				-0.9
1,639,966	-				-1.1
1,639,966	-				+0.7
1,639,966	-				-0.3
1,639,966	-				-0.3
1,639,966	-				-0.1
1,639,966	-				-2.8
1,639,966	-				-2.0
1,639,966	-				-1.3
1,639,966	-				-1.0
1,639,966	-				-2.3
1,639,966	-				-1.3
1,639,966	-				-0.9
1,639,966	-				-0.3
1,639,966	-				+0.9
1,639,966	-				-0.7
1,639,966	-				-0.9
1,639,966	-				+0.2
1,639,966	-				-0.9
1,639,966	-				-1.9
1,639,966	-				-0.7
1,639,966	-				-0.7
1,639,966	-				-2.0
1,639,981	+				-0.7
1,639,981	+				+0.7
1,639,981	+				+0.0
1,639,981	+				-1.3
1,639,981	+				-2.4
1,639,981	+				-0.3
1,639,981	+				-0.3
1,639,981	+				-1.3
1,639,981	+				-0.3
1,639,981	+				-2.0
1,639,981	+				-3.4
1,639,981	+				-1.1
1,639,981	+				+0.7
1,639,981	+				-1.3
1,639,982	-				+0.4
1,639,982	-				-1.0
1,639,982	-				-2.1
1,639,982	-				-1.5
1,639,982	-				-0.3
1,639,982	-				-1.8
1,639,982	-				-2.6
1,639,982	-				-0.7
1,639,982	-				-3.1
1,639,982	-				+1.2
1,639,982	-				-1.3
1,639,982	-				+0.9
1,639,982	-				-0.7
1,639,982	-				-0.7
1,639,982	-				-0.4
1,640,017	+				-0.5
1,640,017	+				-0.5
1,640,455	-	secG	OKGIIK_07430	0.52	-0.7
1,640,455	-	secG	OKGIIK_07430	0.52	-0.7
1,640,455	-	secG	OKGIIK_07430	0.52	-1.2
1,640,455	-	secG	OKGIIK_07430	0.52	-0.9
1,640,455	-	secG	OKGIIK_07430	0.52	-1.9
1,640,455	-	secG	OKGIIK_07430	0.52	-0.7
1,640,455	-	secG	OKGIIK_07430	0.52	-1.8
1,640,455	-	secG	OKGIIK_07430	0.52	-1.0
1,640,455	-	secG	OKGIIK_07430	0.52	-0.7
1,640,455	-	secG	OKGIIK_07430	0.52	-0.6
1,640,455	-	secG	OKGIIK_07430	0.52	+0.1
1,640,455	-	secG	OKGIIK_07430	0.52	-0.3
1,640,455	-	secG	OKGIIK_07430	0.52	-0.9
1,640,455	-	secG	OKGIIK_07430	0.52	-2.7
1,640,455	-	secG	OKGIIK_07430	0.52	-0.9
1,640,455	-	secG	OKGIIK_07430	0.52	-2.0
1,640,455	-	secG	OKGIIK_07430	0.52	-0.3
1,640,455	-	secG	OKGIIK_07430	0.52	-0.9
1,640,455	-	secG	OKGIIK_07430	0.52	-0.7
1,640,455	-	secG	OKGIIK_07430	0.52	-1.8
1,640,455	-	secG	OKGIIK_07430	0.52	-1.3
1,640,455	-	secG	OKGIIK_07430	0.52	+0.7
1,640,455	-	secG	OKGIIK_07430	0.52	+0.3
1,640,455	-	secG	OKGIIK_07430	0.52	-0.9
1,640,455	-	secG	OKGIIK_07430	0.52	-4.3
1,640,455	-	secG	OKGIIK_07430	0.52	+1.2
1,640,455	-	secG	OKGIIK_07430	0.52	-1.8
1,640,455	-	secG	OKGIIK_07430	0.52	-0.5
1,640,455	-	secG	OKGIIK_07430	0.52	-1.0
1,640,455	-	secG	OKGIIK_07430	0.52	-1.9
1,640,455	-	secG	OKGIIK_07430	0.52	-0.3
1,640,455	-	secG	OKGIIK_07430	0.52	-1.9
1,640,672	-				-0.5
1,640,681	-				-1.8
1,640,681	-				-0.0
1,640,681	-				-0.7
1,640,681	-				-2.0
1,640,681	-				+0.3
1,641,479	+				-0.9
1,641,479	+				+0.1
1,641,479	+				-0.9
1,641,479	+				-1.3
1,641,480	-				+0.3
1,641,592	+				-0.3
1,641,592	+				-1.5
1,641,592	+				-0.7
1,641,592	+				-1.1
1,641,593	-				-1.9