Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_07320

Experiment: R2A_PIPES pH 4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntdapB and dnaJ are separated by 70 nucleotidesdnaJ and dnaK are separated by 109 nucleotides OKGIIK_07315: dapB - 4-hydroxy-tetrahydrodipicolinate reductase, at 1,619,118 to 1,619,918 dapB OKGIIK_07320: dnaJ - molecular chaperone DnaJ, at 1,619,989 to 1,621,116 dnaJ OKGIIK_07325: dnaK - molecular chaperone DnaK, at 1,621,226 to 1,623,142 dnaK Position (kb) 1619 1620 1621 1622Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1619.043 kb on + strandat 1619.043 kb on + strandat 1619.043 kb on + strandat 1619.044 kb on - strandat 1619.044 kb on - strandat 1619.044 kb on - strandat 1619.070 kb on + strandat 1619.070 kb on + strandat 1619.070 kb on + strandat 1619.070 kb on + strandat 1619.070 kb on + strandat 1619.070 kb on + strandat 1619.070 kb on + strandat 1619.071 kb on - strandat 1619.071 kb on - strandat 1619.071 kb on - strandat 1619.071 kb on - strandat 1619.071 kb on - strandat 1619.071 kb on - strandat 1619.956 kb on + strandat 1619.956 kb on + strandat 1619.956 kb on + strandat 1619.956 kb on + strandat 1619.956 kb on + strandat 1619.956 kb on + strandat 1619.956 kb on + strandat 1619.956 kb on + strandat 1619.956 kb on + strandat 1619.956 kb on + strandat 1619.957 kb on - strandat 1619.957 kb on - strandat 1619.957 kb on - strandat 1619.957 kb on - strandat 1619.957 kb on - strandat 1619.957 kb on - strandat 1620.015 kb on - strandat 1620.253 kb on + strand, within dnaJat 1620.253 kb on + strand, within dnaJat 1620.253 kb on + strand, within dnaJat 1620.254 kb on - strand, within dnaJat 1620.254 kb on - strand, within dnaJat 1620.254 kb on - strand, within dnaJat 1620.254 kb on - strand, within dnaJat 1620.329 kb on + strand, within dnaJat 1620.329 kb on + strand, within dnaJat 1620.329 kb on + strand, within dnaJat 1620.329 kb on + strand, within dnaJat 1620.329 kb on + strand, within dnaJat 1620.329 kb on + strand, within dnaJat 1620.329 kb on + strand, within dnaJat 1620.329 kb on + strand, within dnaJat 1620.329 kb on + strand, within dnaJat 1620.329 kb on + strand, within dnaJat 1620.329 kb on + strand, within dnaJat 1620.329 kb on + strand, within dnaJat 1620.329 kb on + strand, within dnaJat 1620.330 kb on - strand, within dnaJat 1620.330 kb on - strand, within dnaJat 1620.330 kb on - strand, within dnaJat 1620.330 kb on - strand, within dnaJat 1620.330 kb on - strand, within dnaJat 1620.330 kb on - strand, within dnaJat 1620.330 kb on - strand, within dnaJat 1620.330 kb on - strand, within dnaJat 1620.330 kb on - strand, within dnaJat 1620.330 kb on - strand, within dnaJat 1620.330 kb on - strand, within dnaJat 1620.330 kb on - strand, within dnaJat 1620.386 kb on + strand, within dnaJat 1620.386 kb on + strand, within dnaJat 1620.386 kb on + strand, within dnaJat 1620.386 kb on + strand, within dnaJat 1620.386 kb on + strand, within dnaJat 1620.386 kb on + strand, within dnaJat 1620.386 kb on + strand, within dnaJat 1620.386 kb on + strand, within dnaJat 1620.386 kb on + strand, within dnaJat 1620.386 kb on + strand, within dnaJat 1620.386 kb on + strand, within dnaJat 1620.386 kb on + strand, within dnaJat 1620.386 kb on + strand, within dnaJat 1620.387 kb on - strand, within dnaJat 1620.387 kb on - strand, within dnaJat 1620.387 kb on - strand, within dnaJat 1620.387 kb on - strand, within dnaJat 1620.387 kb on - strand, within dnaJat 1620.387 kb on - strand, within dnaJat 1620.387 kb on - strand, within dnaJat 1620.387 kb on - strand, within dnaJat 1620.387 kb on - strand, within dnaJat 1620.387 kb on - strand, within dnaJat 1620.387 kb on - strand, within dnaJat 1620.387 kb on - strand, within dnaJat 1620.387 kb on - strand, within dnaJat 1620.478 kb on + strand, within dnaJat 1620.478 kb on + strand, within dnaJat 1620.478 kb on + strand, within dnaJat 1620.479 kb on - strand, within dnaJat 1620.479 kb on - strand, within dnaJat 1620.479 kb on - strand, within dnaJat 1620.730 kb on + strand, within dnaJat 1620.730 kb on + strand, within dnaJat 1620.731 kb on - strand, within dnaJat 1620.731 kb on - strand, within dnaJat 1620.731 kb on - strand, within dnaJat 1620.731 kb on - strand, within dnaJat 1620.761 kb on + strand, within dnaJat 1620.761 kb on + strand, within dnaJat 1620.761 kb on + strand, within dnaJat 1620.761 kb on + strand, within dnaJat 1620.761 kb on + strand, within dnaJat 1620.761 kb on + strand, within dnaJat 1620.761 kb on + strand, within dnaJat 1620.761 kb on + strand, within dnaJat 1620.762 kb on - strand, within dnaJat 1620.762 kb on - strand, within dnaJat 1620.762 kb on - strand, within dnaJat 1620.762 kb on - strand, within dnaJat 1620.762 kb on - strand, within dnaJat 1620.762 kb on - strand, within dnaJat 1620.762 kb on - strand, within dnaJat 1620.762 kb on - strand, within dnaJat 1620.762 kb on - strand, within dnaJat 1620.762 kb on - strand, within dnaJat 1620.832 kb on - strand, within dnaJat 1620.920 kb on + strand, within dnaJat 1620.920 kb on + strand, within dnaJat 1620.920 kb on + strand, within dnaJat 1620.920 kb on + strand, within dnaJat 1620.920 kb on + strand, within dnaJat 1620.920 kb on + strand, within dnaJat 1620.920 kb on + strand, within dnaJat 1620.920 kb on + strand, within dnaJat 1620.920 kb on + strand, within dnaJat 1620.920 kb on + strand, within dnaJat 1620.920 kb on + strand, within dnaJat 1620.921 kb on - strand, within dnaJat 1620.921 kb on - strand, within dnaJat 1620.921 kb on - strand, within dnaJat 1620.921 kb on - strand, within dnaJat 1620.921 kb on - strand, within dnaJat 1620.956 kb on + strand, within dnaJat 1620.956 kb on + strand, within dnaJat 1620.956 kb on + strand, within dnaJat 1620.956 kb on + strand, within dnaJat 1620.956 kb on + strand, within dnaJat 1620.957 kb on - strand, within dnaJat 1620.957 kb on - strand, within dnaJat 1621.022 kb on + strandat 1621.022 kb on + strandat 1621.022 kb on + strandat 1621.022 kb on + strandat 1621.022 kb on + strandat 1621.022 kb on + strandat 1621.022 kb on + strandat 1621.022 kb on + strandat 1621.022 kb on + strandat 1621.022 kb on + strandat 1621.022 kb on + strandat 1621.023 kb on - strandat 1621.023 kb on - strandat 1621.023 kb on - strandat 1621.023 kb on - strandat 1621.023 kb on - strandat 1621.023 kb on - strandat 1621.023 kb on - strandat 1621.023 kb on - strandat 1621.023 kb on - strandat 1621.023 kb on - strandat 1621.023 kb on - strandat 1621.023 kb on - strandat 1621.023 kb on - strandat 1621.097 kb on + strandat 1621.097 kb on + strandat 1621.097 kb on + strandat 1621.097 kb on + strandat 1621.097 kb on + strandat 1621.098 kb on - strandat 1621.098 kb on - strandat 1621.098 kb on - strandat 1621.098 kb on - strandat 1621.098 kb on - strandat 1621.100 kb on + strandat 1621.100 kb on + strandat 1621.100 kb on + strandat 1621.101 kb on - strandat 1621.101 kb on - strandat 1621.101 kb on - strandat 1621.208 kb on + strandat 1621.227 kb on + strandat 1621.227 kb on + strandat 1621.228 kb on - strandat 1621.228 kb on - strandat 1621.228 kb on - strandat 1621.228 kb on - strandat 1621.228 kb on - strandat 1621.344 kb on + strandat 1621.344 kb on + strandat 1621.345 kb on - strandat 1621.345 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A_PIPES pH 4
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1,619,043 + -0.8
1,619,043 + -0.4
1,619,043 + -2.2
1,619,044 - -1.4
1,619,044 - +2.0
1,619,044 - -2.1
1,619,070 + +0.8
1,619,070 + -0.6
1,619,070 + -0.4
1,619,070 + -0.7
1,619,070 + -1.5
1,619,070 + -1.5
1,619,070 + -1.6
1,619,071 - -1.7
1,619,071 - -0.9
1,619,071 - -0.6
1,619,071 - -1.4
1,619,071 - +0.1
1,619,071 - -0.9
1,619,956 + -1.9
1,619,956 + -1.4
1,619,956 + +0.6
1,619,956 + -1.2
1,619,956 + -0.8
1,619,956 + +0.1
1,619,956 + -1.1
1,619,956 + -1.4
1,619,956 + -0.9
1,619,956 + +1.2
1,619,957 - -1.4
1,619,957 - -0.9
1,619,957 - +0.3
1,619,957 - -0.7
1,619,957 - -1.6
1,619,957 - -0.4
1,620,015 - -1.4
1,620,253 + dnaJ OKGIIK_07320 0.23 +1.2
1,620,253 + dnaJ OKGIIK_07320 0.23 -1.6
1,620,253 + dnaJ OKGIIK_07320 0.23 -0.4
1,620,254 - dnaJ OKGIIK_07320 0.23 -0.4
1,620,254 - dnaJ OKGIIK_07320 0.23 -1.2
1,620,254 - dnaJ OKGIIK_07320 0.23 -0.4
1,620,254 - dnaJ OKGIIK_07320 0.23 +0.3
1,620,329 + dnaJ OKGIIK_07320 0.30 -3.1
1,620,329 + dnaJ OKGIIK_07320 0.30 -1.5
1,620,329 + dnaJ OKGIIK_07320 0.30 -0.9
1,620,329 + dnaJ OKGIIK_07320 0.30 -1.4
1,620,329 + dnaJ OKGIIK_07320 0.30 -1.7
1,620,329 + dnaJ OKGIIK_07320 0.30 +0.4
1,620,329 + dnaJ OKGIIK_07320 0.30 -1.2
1,620,329 + dnaJ OKGIIK_07320 0.30 -0.9
1,620,329 + dnaJ OKGIIK_07320 0.30 -0.2
1,620,329 + dnaJ OKGIIK_07320 0.30 +0.6
1,620,329 + dnaJ OKGIIK_07320 0.30 -0.4
1,620,329 + dnaJ OKGIIK_07320 0.30 -0.7
1,620,329 + dnaJ OKGIIK_07320 0.30 -0.4
1,620,330 - dnaJ OKGIIK_07320 0.30 -1.7
1,620,330 - dnaJ OKGIIK_07320 0.30 -1.2
1,620,330 - dnaJ OKGIIK_07320 0.30 -0.4
1,620,330 - dnaJ OKGIIK_07320 0.30 +0.4
1,620,330 - dnaJ OKGIIK_07320 0.30 -0.7
1,620,330 - dnaJ OKGIIK_07320 0.30 -0.9
1,620,330 - dnaJ OKGIIK_07320 0.30 -1.8
1,620,330 - dnaJ OKGIIK_07320 0.30 -0.7
1,620,330 - dnaJ OKGIIK_07320 0.30 -1.2
1,620,330 - dnaJ OKGIIK_07320 0.30 -1.2
1,620,330 - dnaJ OKGIIK_07320 0.30 +0.6
1,620,330 - dnaJ OKGIIK_07320 0.30 -0.9
1,620,386 + dnaJ OKGIIK_07320 0.35 -0.9
1,620,386 + dnaJ OKGIIK_07320 0.35 -1.5
1,620,386 + dnaJ OKGIIK_07320 0.35 +0.6
1,620,386 + dnaJ OKGIIK_07320 0.35 -2.1
1,620,386 + dnaJ OKGIIK_07320 0.35 -0.7
1,620,386 + dnaJ OKGIIK_07320 0.35 -2.7
1,620,386 + dnaJ OKGIIK_07320 0.35 +1.9
1,620,386 + dnaJ OKGIIK_07320 0.35 -0.7
1,620,386 + dnaJ OKGIIK_07320 0.35 -2.3
1,620,386 + dnaJ OKGIIK_07320 0.35 -1.4
1,620,386 + dnaJ OKGIIK_07320 0.35 -2.7
1,620,386 + dnaJ OKGIIK_07320 0.35 -0.7
1,620,386 + dnaJ OKGIIK_07320 0.35 +0.3
1,620,387 - dnaJ OKGIIK_07320 0.35 -0.4
1,620,387 - dnaJ OKGIIK_07320 0.35 -0.8
1,620,387 - dnaJ OKGIIK_07320 0.35 +0.6
1,620,387 - dnaJ OKGIIK_07320 0.35 -1.7
1,620,387 - dnaJ OKGIIK_07320 0.35 -1.4
1,620,387 - dnaJ OKGIIK_07320 0.35 -0.7
1,620,387 - dnaJ OKGIIK_07320 0.35 -0.2
1,620,387 - dnaJ OKGIIK_07320 0.35 -0.4
1,620,387 - dnaJ OKGIIK_07320 0.35 -2.6
1,620,387 - dnaJ OKGIIK_07320 0.35 -1.3
1,620,387 - dnaJ OKGIIK_07320 0.35 -0.4
1,620,387 - dnaJ OKGIIK_07320 0.35 -2.1
1,620,387 - dnaJ OKGIIK_07320 0.35 -0.7
1,620,478 + dnaJ OKGIIK_07320 0.43 -1.5
1,620,478 + dnaJ OKGIIK_07320 0.43 -0.4
1,620,478 + dnaJ OKGIIK_07320 0.43 +0.1
1,620,479 - dnaJ OKGIIK_07320 0.43 -0.9
1,620,479 - dnaJ OKGIIK_07320 0.43 -0.9
1,620,479 - dnaJ OKGIIK_07320 0.43 -1.3
1,620,730 + dnaJ OKGIIK_07320 0.66 -2.8
1,620,730 + dnaJ OKGIIK_07320 0.66 -1.4
1,620,731 - dnaJ OKGIIK_07320 0.66 -1.2
1,620,731 - dnaJ OKGIIK_07320 0.66 +0.2
1,620,731 - dnaJ OKGIIK_07320 0.66 -0.4
1,620,731 - dnaJ OKGIIK_07320 0.66 -1.7
1,620,761 + dnaJ OKGIIK_07320 0.68 -0.9
1,620,761 + dnaJ OKGIIK_07320 0.68 -0.2
1,620,761 + dnaJ OKGIIK_07320 0.68 -1.5
1,620,761 + dnaJ OKGIIK_07320 0.68 -0.9
1,620,761 + dnaJ OKGIIK_07320 0.68 -0.1
1,620,761 + dnaJ OKGIIK_07320 0.68 +0.1
1,620,761 + dnaJ OKGIIK_07320 0.68 -2.6
1,620,761 + dnaJ OKGIIK_07320 0.68 -1.9
1,620,762 - dnaJ OKGIIK_07320 0.69 -1.1
1,620,762 - dnaJ OKGIIK_07320 0.69 -1.2
1,620,762 - dnaJ OKGIIK_07320 0.69 -1.7
1,620,762 - dnaJ OKGIIK_07320 0.69 -2.4
1,620,762 - dnaJ OKGIIK_07320 0.69 -1.2
1,620,762 - dnaJ OKGIIK_07320 0.69 -1.4
1,620,762 - dnaJ OKGIIK_07320 0.69 +0.1
1,620,762 - dnaJ OKGIIK_07320 0.69 -0.4
1,620,762 - dnaJ OKGIIK_07320 0.69 -1.2
1,620,762 - dnaJ OKGIIK_07320 0.69 +1.2
1,620,832 - dnaJ OKGIIK_07320 0.75 -0.7
1,620,920 + dnaJ OKGIIK_07320 0.83 -1.8
1,620,920 + dnaJ OKGIIK_07320 0.83 -2.2
1,620,920 + dnaJ OKGIIK_07320 0.83 -1.2
1,620,920 + dnaJ OKGIIK_07320 0.83 -0.9
1,620,920 + dnaJ OKGIIK_07320 0.83 -2.3
1,620,920 + dnaJ OKGIIK_07320 0.83 -1.4
1,620,920 + dnaJ OKGIIK_07320 0.83 -0.7
1,620,920 + dnaJ OKGIIK_07320 0.83 -1.9
1,620,920 + dnaJ OKGIIK_07320 0.83 -2.1
1,620,920 + dnaJ OKGIIK_07320 0.83 -1.7
1,620,920 + dnaJ OKGIIK_07320 0.83 -0.4
1,620,921 - dnaJ OKGIIK_07320 0.83 -0.4
1,620,921 - dnaJ OKGIIK_07320 0.83 -2.5
1,620,921 - dnaJ OKGIIK_07320 0.83 -0.4
1,620,921 - dnaJ OKGIIK_07320 0.83 -2.5
1,620,921 - dnaJ OKGIIK_07320 0.83 -0.4
1,620,956 + dnaJ OKGIIK_07320 0.86 -0.4
1,620,956 + dnaJ OKGIIK_07320 0.86 -0.7
1,620,956 + dnaJ OKGIIK_07320 0.86 -1.3
1,620,956 + dnaJ OKGIIK_07320 0.86 +0.6
1,620,956 + dnaJ OKGIIK_07320 0.86 -0.2
1,620,957 - dnaJ OKGIIK_07320 0.86 -2.4
1,620,957 - dnaJ OKGIIK_07320 0.86 -0.4
1,621,022 + -1.2
1,621,022 + -0.9
1,621,022 + +0.2
1,621,022 + -2.7
1,621,022 + +1.2
1,621,022 + -0.4
1,621,022 + -0.7
1,621,022 + -1.4
1,621,022 + -0.4
1,621,022 + -0.2
1,621,022 + -0.4
1,621,023 - -1.5
1,621,023 - -1.9
1,621,023 - -1.5
1,621,023 - -1.5
1,621,023 - +1.3
1,621,023 - -0.2
1,621,023 - -1.9
1,621,023 - -0.4
1,621,023 - -3.6
1,621,023 - -0.8
1,621,023 - -0.4
1,621,023 - -0.7
1,621,023 - -2.8
1,621,097 + +1.3
1,621,097 + -1.9
1,621,097 + -0.9
1,621,097 + +0.9
1,621,097 + -1.7
1,621,098 - -0.7
1,621,098 - -0.7
1,621,098 - -2.8
1,621,098 - -0.2
1,621,098 - -0.9
1,621,100 + -0.7
1,621,100 + -1.4
1,621,100 + -1.4
1,621,101 - +0.6
1,621,101 - -0.9
1,621,101 - +1.4
1,621,208 + -0.7
1,621,227 + +0.6
1,621,227 + -1.5
1,621,228 - -2.3
1,621,228 - +0.3
1,621,228 - +0.1
1,621,228 - -1.2
1,621,228 - -1.8
1,621,344 + +0.3
1,621,344 + -0.9
1,621,345 - -0.4
1,621,345 - -1.5

Or see this region's nucleotide sequence