Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_07290

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,611,123	+	lysR	OKGIIK_07285	0.29	+0.8
1,611,124	-	lysR	OKGIIK_07285	0.29	-0.9
1,611,124	-	lysR	OKGIIK_07285	0.29	+0.8
1,611,124	-	lysR	OKGIIK_07285	0.29	-0.2
1,611,124	-	lysR	OKGIIK_07285	0.29	+0.6
1,611,124	-	lysR	OKGIIK_07285	0.29	-1.5
1,611,124	-	lysR	OKGIIK_07285	0.29	-1.8
1,611,147	+	lysR	OKGIIK_07285	0.32	+0.0
1,611,147	+	lysR	OKGIIK_07285	0.32	+0.3
1,611,147	+	lysR	OKGIIK_07285	0.32	-0.1
1,611,147	+	lysR	OKGIIK_07285	0.32	-1.5
1,611,147	+	lysR	OKGIIK_07285	0.32	+0.4
1,611,147	+	lysR	OKGIIK_07285	0.32	-0.9
1,611,148	-	lysR	OKGIIK_07285	0.32	-0.4
1,611,148	-	lysR	OKGIIK_07285	0.32	+0.4
1,611,148	-	lysR	OKGIIK_07285	0.32	+1.5
1,611,148	-	lysR	OKGIIK_07285	0.32	-0.4
1,611,148	-	lysR	OKGIIK_07285	0.32	+2.1
1,611,149	+	lysR	OKGIIK_07285	0.32	+0.9
1,611,149	+	lysR	OKGIIK_07285	0.32	-1.2
1,611,149	+	lysR	OKGIIK_07285	0.32	+0.3
1,611,149	+	lysR	OKGIIK_07285	0.32	+0.7
1,611,149	+	lysR	OKGIIK_07285	0.32	-0.7
1,611,149	+	lysR	OKGIIK_07285	0.32	+1.5
1,611,149	+	lysR	OKGIIK_07285	0.32	+0.2
1,611,149	+	lysR	OKGIIK_07285	0.32	+1.8
1,611,149	+	lysR	OKGIIK_07285	0.32	+0.8
1,611,149	+	lysR	OKGIIK_07285	0.32	+0.8
1,611,149	+	lysR	OKGIIK_07285	0.32	-0.1
1,611,149	+	lysR	OKGIIK_07285	0.32	-0.2
1,611,149	+	lysR	OKGIIK_07285	0.32	-0.8
1,611,149	+	lysR	OKGIIK_07285	0.32	+0.4
1,611,150	-	lysR	OKGIIK_07285	0.32	+1.2
1,611,150	-	lysR	OKGIIK_07285	0.32	-2.0
1,611,150	-	lysR	OKGIIK_07285	0.32	-0.8
1,611,150	-	lysR	OKGIIK_07285	0.32	-0.7
1,611,150	-	lysR	OKGIIK_07285	0.32	-0.6
1,611,150	-	lysR	OKGIIK_07285	0.32	+1.0
1,611,243	+	lysR	OKGIIK_07285	0.42	-0.4
1,611,243	+	lysR	OKGIIK_07285	0.42	+0.3
1,611,243	+	lysR	OKGIIK_07285	0.42	+0.1
1,611,243	+	lysR	OKGIIK_07285	0.42	-0.6
1,611,243	+	lysR	OKGIIK_07285	0.42	-0.8
1,611,243	+	lysR	OKGIIK_07285	0.42	-1.3
1,611,243	+	lysR	OKGIIK_07285	0.42	+0.1
1,611,243	+	lysR	OKGIIK_07285	0.42	+0.4
1,611,243	+	lysR	OKGIIK_07285	0.42	-0.6
1,611,243	+	lysR	OKGIIK_07285	0.42	+1.1
1,611,243	+	lysR	OKGIIK_07285	0.42	+1.8
1,611,243	+	lysR	OKGIIK_07285	0.42	-0.2
1,611,243	+	lysR	OKGIIK_07285	0.42	+1.4
1,611,243	+	lysR	OKGIIK_07285	0.42	+0.8
1,611,243	+	lysR	OKGIIK_07285	0.42	-0.8
1,611,243	+	lysR	OKGIIK_07285	0.42	+1.0
1,611,243	+	lysR	OKGIIK_07285	0.42	+1.5
1,611,244	-	lysR	OKGIIK_07285	0.43	+0.5
1,611,244	-	lysR	OKGIIK_07285	0.43	-0.2
1,611,244	-	lysR	OKGIIK_07285	0.43	+0.4
1,611,244	-	lysR	OKGIIK_07285	0.43	-1.5
1,611,244	-	lysR	OKGIIK_07285	0.43	+0.9
1,611,244	-	lysR	OKGIIK_07285	0.43	-0.1
1,611,244	-	lysR	OKGIIK_07285	0.43	+0.8
1,611,244	-	lysR	OKGIIK_07285	0.43	-0.2
1,611,480	+	lysR	OKGIIK_07285	0.68	+0.3
1,611,480	+	lysR	OKGIIK_07285	0.68	-2.3
1,611,480	+	lysR	OKGIIK_07285	0.68	-0.2
1,611,481	-	lysR	OKGIIK_07285	0.69	-0.2
1,611,481	-	lysR	OKGIIK_07285	0.69	+1.2
1,611,481	-	lysR	OKGIIK_07285	0.69	+1.0
1,611,639	+	lysR	OKGIIK_07285	0.86	-1.8
1,611,640	-	lysR	OKGIIK_07285	0.86	-0.1
1,612,067	+				+1.3
1,612,067	+				-1.4
1,612,067	+				-0.2
1,612,067	+				-0.3
1,612,067	+				-1.2
1,612,067	+				-0.4
1,612,067	+				+0.1
1,612,068	-				-1.9
1,612,088	+				+1.2
1,612,088	+				+0.1
1,612,088	+				-0.6
1,612,088	+				-0.2
1,612,223	+	greA	OKGIIK_07290	0.34	-0.1
1,612,223	+	greA	OKGIIK_07290	0.34	+0.8
1,612,223	+	greA	OKGIIK_07290	0.34	-0.2
1,612,223	+	greA	OKGIIK_07290	0.34	+0.1
1,612,223	+	greA	OKGIIK_07290	0.34	+0.1
1,612,224	-	greA	OKGIIK_07290	0.34	-0.0
1,612,224	-	greA	OKGIIK_07290	0.34	+0.7
1,612,224	-	greA	OKGIIK_07290	0.34	+0.4
1,612,224	-	greA	OKGIIK_07290	0.34	+2.0
1,612,394	+	greA	OKGIIK_07290	0.70	+1.1
1,612,394	+	greA	OKGIIK_07290	0.70	-2.0
1,612,395	-	greA	OKGIIK_07290	0.70	+0.1
1,612,395	-	greA	OKGIIK_07290	0.70	+1.0
1,612,639	+				+0.8
1,612,640	-				+0.4
1,612,640	-				+0.4
1,612,723	+				+0.1
1,612,724	-				+0.6
1,613,463	+	carB	OKGIIK_07295	0.29	-0.6
1,613,464	-	carB	OKGIIK_07295	0.29	-0.8