Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_06145

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,349,741	+	merA	OKGIIK_06135	0.70	+0.0
1,349,766	+	merA	OKGIIK_06135	0.71	-0.6
1,349,766	+	merA	OKGIIK_06135	0.71	-1.0
1,349,766	+	merA	OKGIIK_06135	0.71	-0.2
1,349,766	+	merA	OKGIIK_06135	0.71	-0.5
1,349,766	+	merA	OKGIIK_06135	0.71	-1.8
1,349,766	+	merA	OKGIIK_06135	0.71	+0.0
1,349,766	+	merA	OKGIIK_06135	0.71	-1.0
1,349,766	+	merA	OKGIIK_06135	0.71	-1.7
1,349,766	+	merA	OKGIIK_06135	0.71	-1.1
1,349,766	+	merA	OKGIIK_06135	0.71	+0.5
1,349,766	+	merA	OKGIIK_06135	0.71	-1.2
1,349,767	-	merA	OKGIIK_06135	0.72	+0.9
1,349,767	-	merA	OKGIIK_06135	0.72	+1.0
1,349,767	-	merA	OKGIIK_06135	0.72	+1.2
1,349,767	-	merA	OKGIIK_06135	0.72	-0.7
1,349,767	-	merA	OKGIIK_06135	0.72	-0.7
1,349,767	-	merA	OKGIIK_06135	0.72	-1.3
1,349,767	-	merA	OKGIIK_06135	0.72	+0.4
1,349,825	+	merA	OKGIIK_06135	0.75	-1.0
1,349,920	+	merA	OKGIIK_06135	0.80	+0.1
1,349,920	+	merA	OKGIIK_06135	0.80	-1.1
1,349,920	+	merA	OKGIIK_06135	0.80	+1.4
1,349,920	+	merA	OKGIIK_06135	0.80	+0.0
1,349,920	+	merA	OKGIIK_06135	0.80	-1.6
1,349,921	-	merA	OKGIIK_06135	0.80	-0.4
1,349,921	-	merA	OKGIIK_06135	0.80	+0.6
1,349,921	-	merA	OKGIIK_06135	0.80	+0.6
1,350,030	-	merA	OKGIIK_06135	0.87	-2.4
1,350,030	-	merA	OKGIIK_06135	0.87	+1.9
1,350,283	+				+1.0
1,350,284	-				-1.6
1,350,284	-				+0.6
1,350,284	-				+1.9
1,350,327	+	merD	OKGIIK_06140	0.14	+0.3
1,350,328	-	merD	OKGIIK_06140	0.15	+0.9
1,350,340	+	merD	OKGIIK_06140	0.18	-0.9
1,350,340	+	merD	OKGIIK_06140	0.18	-1.0
1,350,341	-	merD	OKGIIK_06140	0.18	-1.9
1,350,388	+	merD	OKGIIK_06140	0.31	+1.6
1,350,510	+	merD	OKGIIK_06140	0.64	+0.0
1,350,510	+	merD	OKGIIK_06140	0.64	-1.9
1,350,536	+	merD	OKGIIK_06140	0.72	-0.8
1,350,669	+	merE	OKGIIK_06145	0.15	-0.7
1,350,740	+	merE	OKGIIK_06145	0.47	+1.6
1,350,829	+	merE	OKGIIK_06145	0.88	+1.3
1,350,850	+				+0.5
1,350,850	+				-0.6
1,350,850	+				-1.6
1,350,850	+				+0.3
1,350,851	-				-1.7
1,350,851	-				-0.8
1,350,851	-				+0.9
1,350,851	-				+0.0
1,350,929	+				+0.6
1,350,999	+	yjbI	OKGIIK_06150	0.15	-0.1
1,351,000	-	yjbI	OKGIIK_06150	0.15	+0.5
1,351,064	+	yjbI	OKGIIK_06150	0.32	-0.5
1,351,064	+	yjbI	OKGIIK_06150	0.32	+0.8
1,351,064	+	yjbI	OKGIIK_06150	0.32	+0.3
1,351,064	+	yjbI	OKGIIK_06150	0.32	-0.9
1,351,064	+	yjbI	OKGIIK_06150	0.32	-1.0
1,351,064	+	yjbI	OKGIIK_06150	0.32	+0.3
1,351,064	+	yjbI	OKGIIK_06150	0.32	+0.9
1,351,064	+	yjbI	OKGIIK_06150	0.32	-0.2
1,351,064	+	yjbI	OKGIIK_06150	0.32	+2.0
1,351,064	+	yjbI	OKGIIK_06150	0.32	-1.2
1,351,064	+	yjbI	OKGIIK_06150	0.32	-0.5
1,351,064	+	yjbI	OKGIIK_06150	0.32	-1.1
1,351,064	+	yjbI	OKGIIK_06150	0.32	+0.3
1,351,064	+	yjbI	OKGIIK_06150	0.32	-0.4
1,351,064	+	yjbI	OKGIIK_06150	0.32	+0.0
1,351,064	+	yjbI	OKGIIK_06150	0.32	+0.8
1,351,064	+	yjbI	OKGIIK_06150	0.32	-0.4
1,351,064	+	yjbI	OKGIIK_06150	0.32	-1.0
1,351,064	+	yjbI	OKGIIK_06150	0.32	-1.0
1,351,064	+	yjbI	OKGIIK_06150	0.32	-0.5
1,351,065	-	yjbI	OKGIIK_06150	0.33	-1.6
1,351,065	-	yjbI	OKGIIK_06150	0.33	+0.0
1,351,065	-	yjbI	OKGIIK_06150	0.33	+1.3
1,351,065	-	yjbI	OKGIIK_06150	0.33	+0.2
1,351,065	-	yjbI	OKGIIK_06150	0.33	-0.1
1,351,065	-	yjbI	OKGIIK_06150	0.33	+0.3
1,351,065	-	yjbI	OKGIIK_06150	0.33	-1.5
1,351,065	-	yjbI	OKGIIK_06150	0.33	+1.5
1,351,065	-	yjbI	OKGIIK_06150	0.33	+0.2
1,351,065	-	yjbI	OKGIIK_06150	0.33	+0.2
1,351,066	+	yjbI	OKGIIK_06150	0.33	-1.1
1,351,066	+	yjbI	OKGIIK_06150	0.33	-1.7
1,351,066	+	yjbI	OKGIIK_06150	0.33	+1.1
1,351,066	+	yjbI	OKGIIK_06150	0.33	+2.0
1,351,066	+	yjbI	OKGIIK_06150	0.33	+0.8
1,351,066	+	yjbI	OKGIIK_06150	0.33	+1.3
1,351,067	-	yjbI	OKGIIK_06150	0.33	+1.3
1,351,067	-	yjbI	OKGIIK_06150	0.33	+0.5
1,351,067	-	yjbI	OKGIIK_06150	0.33	-0.9
1,351,083	+	yjbI	OKGIIK_06150	0.37	-1.1
1,351,083	+	yjbI	OKGIIK_06150	0.37	+0.6
1,351,084	-	yjbI	OKGIIK_06150	0.38	+1.3
1,351,084	-	yjbI	OKGIIK_06150	0.38	+1.8
1,351,084	-	yjbI	OKGIIK_06150	0.38	-3.0
1,351,204	+	yjbI	OKGIIK_06150	0.69	-2.0
1,351,204	+	yjbI	OKGIIK_06150	0.69	+0.2
1,351,205	-	yjbI	OKGIIK_06150	0.70	-0.7
1,351,317	+				-0.6
1,351,317	+				+0.9
1,351,317	+				+0.6
1,351,317	+				-0.5
1,351,318	-				-0.4
1,351,318	-				-0.7
1,351,318	-				+0.2
1,351,318	-				-0.8
1,351,318	-				+0.0
1,351,318	-				-1.2
1,351,318	-				-0.8
1,351,318	-				-0.5
1,351,438	+				-1.8
1,351,438	+				+1.0
1,351,439	-				-0.4
1,351,448	+				+0.0
1,351,456	+				-0.5
1,351,456	+				+1.8
1,351,457	-				-0.7
1,351,457	-				-1.5
1,351,457	-				-0.7
1,351,467	+	lpd	OKGIIK_06155	0.10	-0.5
1,351,468	-	lpd	OKGIIK_06155	0.10	-2.0