Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_06105

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,344,647	+				+0.3
1,344,698	-				-0.8
1,344,879	+		OKGIIK_06095	0.67	-0.1
1,344,879	+		OKGIIK_06095	0.67	+0.7
1,344,880	-		OKGIIK_06095	0.67	+2.3
1,344,950	+				-1.1
1,344,950	+				-1.2
1,344,950	+				-1.1
1,344,951	-				+0.1
1,344,951	-				+1.8
1,345,002	-				-1.8
1,345,017	+				+0.0
1,345,018	-				+0.3
1,345,018	-				-0.5
1,345,018	-				-1.1
1,345,153	+				+0.3
1,345,153	+				-1.2
1,345,153	+				-0.7
1,345,153	+				-0.5
1,345,154	-				+0.5
1,345,154	-				-0.8
1,345,154	-				-1.6
1,345,154	-				-0.7
1,345,175	-				+0.8
1,345,279	+		OKGIIK_06100	0.39	+0.0
1,345,279	+		OKGIIK_06100	0.39	+0.2
1,345,279	+		OKGIIK_06100	0.39	+0.1
1,345,279	+		OKGIIK_06100	0.39	-1.9
1,345,279	+		OKGIIK_06100	0.39	-2.5
1,345,279	+		OKGIIK_06100	0.39	-0.1
1,345,280	-		OKGIIK_06100	0.39	+0.0
1,345,859	+		OKGIIK_06105	0.45	-0.7
1,345,859	+		OKGIIK_06105	0.45	+0.0
1,345,859	+		OKGIIK_06105	0.45	+5.8
1,345,860	-		OKGIIK_06105	0.45	-0.7
1,345,927	+		OKGIIK_06105	0.53	+0.3
1,345,927	+		OKGIIK_06105	0.53	-0.2
1,345,927	+		OKGIIK_06105	0.53	-0.2
1,345,928	-		OKGIIK_06105	0.53	-0.4
1,345,928	-		OKGIIK_06105	0.53	-1.6
1,345,928	-		OKGIIK_06105	0.53	-1.4
1,345,928	-		OKGIIK_06105	0.53	+1.3
1,345,982	+		OKGIIK_06105	0.59	+1.1
1,345,982	+		OKGIIK_06105	0.59	-1.7
1,345,983	-		OKGIIK_06105	0.59	+1.0
1,346,026	+		OKGIIK_06105	0.64	-1.1
1,346,026	+		OKGIIK_06105	0.64	+1.5
1,346,027	-		OKGIIK_06105	0.64	-0.2
1,346,065	+		OKGIIK_06105	0.69	-0.2
1,346,065	+		OKGIIK_06105	0.69	+0.0
1,346,066	-		OKGIIK_06105	0.69	+0.1
1,346,066	-		OKGIIK_06105	0.69	-1.7
1,346,066	-		OKGIIK_06105	0.69	+0.3
1,346,119	-		OKGIIK_06105	0.75	-0.7
1,346,119	-		OKGIIK_06105	0.75	+0.0
1,346,147	+		OKGIIK_06105	0.78	-0.5
1,346,197	+		OKGIIK_06105	0.84	+0.0
1,346,198	-		OKGIIK_06105	0.84	-0.2
1,346,219	+		OKGIIK_06105	0.86	+0.3
1,346,642	+		OKGIIK_06110	0.44	-0.7
1,346,642	+		OKGIIK_06110	0.44	+0.2
1,346,642	+		OKGIIK_06110	0.44	+0.0
1,346,642	+		OKGIIK_06110	0.44	-0.7
1,346,643	-		OKGIIK_06110	0.44	+0.3
1,346,643	-		OKGIIK_06110	0.44	-2.2
1,346,643	-		OKGIIK_06110	0.44	-0.5
1,346,785	+		OKGIIK_06110	0.63	-0.2
1,346,785	+		OKGIIK_06110	0.63	-0.2
1,346,786	-		OKGIIK_06110	0.63	-0.7
1,346,786	-		OKGIIK_06110	0.63	-1.1
1,346,972	+		OKGIIK_06110	0.88	-2.7
1,346,973	-		OKGIIK_06110	0.88	+0.0
1,347,090	-				-2.1
1,347,093	+				-1.6
1,347,093	+				+0.0
1,347,093	+				-0.5
1,347,094	-				+2.9
1,347,094	-				-0.6
1,347,118	+				+0.0
1,347,119	-				-0.2
1,347,156	-				+0.0
1,347,203	+	merT	OKGIIK_06115	0.15	+0.9
1,347,203	+	merT	OKGIIK_06115	0.15	-0.1
1,347,214	+	merT	OKGIIK_06115	0.18	+0.1
1,347,214	+	merT	OKGIIK_06115	0.18	+0.6
1,347,214	+	merT	OKGIIK_06115	0.18	-0.5
1,347,315	+	merT	OKGIIK_06115	0.46	-0.3
1,347,315	+	merT	OKGIIK_06115	0.46	-1.1
1,347,315	+	merT	OKGIIK_06115	0.46	+0.7
1,347,316	-	merT	OKGIIK_06115	0.47	+0.5
1,347,320	+	merT	OKGIIK_06115	0.48	-1.6