Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_06085

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,342,735	+				-2.0
1,342,735	+				-0.9
1,342,735	+				-0.4
1,342,735	+				-2.1
1,342,735	+				-0.7
1,342,735	+				+0.6
1,342,736	-				-0.9
1,342,736	-				-2.2
1,342,795	+				-1.9
1,342,796	-				-1.1
1,342,880	+				+0.3
1,342,936	+		OKGIIK_06080	0.16	-0.7
1,342,936	+		OKGIIK_06080	0.16	-0.7
1,342,936	+		OKGIIK_06080	0.16	-0.5
1,342,936	+		OKGIIK_06080	0.16	-0.4
1,342,937	-		OKGIIK_06080	0.16	-0.6
1,342,937	-		OKGIIK_06080	0.16	-0.3
1,342,937	-		OKGIIK_06080	0.16	-1.9
1,342,937	-		OKGIIK_06080	0.16	+0.8
1,342,937	-		OKGIIK_06080	0.16	-0.4
1,342,937	-		OKGIIK_06080	0.16	-1.1
1,342,989	+		OKGIIK_06080	0.24	-1.7
1,342,990	-		OKGIIK_06080	0.24	-1.0
1,342,990	-		OKGIIK_06080	0.24	-0.4
1,343,070	-		OKGIIK_06080	0.37	-1.9
1,343,070	-		OKGIIK_06080	0.37	-0.6
1,343,130	+		OKGIIK_06080	0.46	-2.1
1,343,130	+		OKGIIK_06080	0.46	-1.6
1,343,130	+		OKGIIK_06080	0.46	-1.0
1,343,130	+		OKGIIK_06080	0.46	-2.0
1,343,130	+		OKGIIK_06080	0.46	-0.4
1,343,130	+		OKGIIK_06080	0.46	+0.6
1,343,131	-		OKGIIK_06080	0.46	-1.3
1,343,131	-		OKGIIK_06080	0.46	-2.6
1,343,131	-		OKGIIK_06080	0.46	-0.7
1,343,290	+		OKGIIK_06080	0.71	-0.8
1,343,290	+		OKGIIK_06080	0.71	-2.1
1,343,290	+		OKGIIK_06080	0.71	-0.4
1,343,290	+		OKGIIK_06080	0.71	-1.1
1,343,290	+		OKGIIK_06080	0.71	-1.6
1,343,290	+		OKGIIK_06080	0.71	+1.2
1,343,290	+		OKGIIK_06080	0.71	-0.2
1,343,290	+		OKGIIK_06080	0.71	-0.4
1,343,291	-		OKGIIK_06080	0.71	-0.3
1,343,291	-		OKGIIK_06080	0.71	-2.6
1,343,291	-		OKGIIK_06080	0.71	-1.5
1,343,291	-		OKGIIK_06080	0.71	-0.7
1,343,291	-		OKGIIK_06080	0.71	+0.6
1,343,291	-		OKGIIK_06080	0.71	-1.6
1,343,291	-		OKGIIK_06080	0.71	-0.3
1,343,291	-		OKGIIK_06080	0.71	-1.0
1,343,291	-		OKGIIK_06080	0.71	+0.6
1,343,291	-		OKGIIK_06080	0.71	-1.0
1,343,299	+		OKGIIK_06080	0.73	-0.4
1,343,299	+		OKGIIK_06080	0.73	+0.0
1,343,299	+		OKGIIK_06080	0.73	-1.1
1,343,323	+		OKGIIK_06080	0.76	-1.7
1,343,323	+		OKGIIK_06080	0.76	-1.1
1,343,323	+		OKGIIK_06080	0.76	-0.7
1,343,323	+		OKGIIK_06080	0.76	+2.8
1,343,323	+		OKGIIK_06080	0.76	-1.2
1,343,323	+		OKGIIK_06080	0.76	-0.7
1,343,323	+		OKGIIK_06080	0.76	-1.9
1,343,323	+		OKGIIK_06080	0.76	-0.7
1,343,323	+		OKGIIK_06080	0.76	-0.9
1,343,323	+		OKGIIK_06080	0.76	+0.6
1,343,323	+		OKGIIK_06080	0.76	-1.2
1,343,323	+		OKGIIK_06080	0.76	-1.7
1,343,324	-		OKGIIK_06080	0.77	+0.3
1,343,324	-		OKGIIK_06080	0.77	-1.0
1,343,324	-		OKGIIK_06080	0.77	-1.2
1,343,324	-		OKGIIK_06080	0.77	-1.4
1,343,324	-		OKGIIK_06080	0.77	-2.1
1,343,324	-		OKGIIK_06080	0.77	-1.7
1,343,324	-		OKGIIK_06080	0.77	-2.6
1,343,324	-		OKGIIK_06080	0.77	-1.0
1,343,324	-		OKGIIK_06080	0.77	-0.7
1,343,384	+		OKGIIK_06080	0.86	-0.2
1,343,384	+		OKGIIK_06080	0.86	-1.6
1,343,384	+		OKGIIK_06080	0.86	-0.6
1,343,384	+		OKGIIK_06080	0.86	-0.6
1,343,385	-		OKGIIK_06080	0.86	-1.0
1,343,385	-		OKGIIK_06080	0.86	-1.7
1,343,385	-		OKGIIK_06080	0.86	+0.4
1,343,385	-		OKGIIK_06080	0.86	-2.9
1,343,385	-		OKGIIK_06080	0.86	-2.0
1,343,385	-		OKGIIK_06080	0.86	+2.0
1,343,385	-		OKGIIK_06080	0.86	-1.0
1,343,385	-		OKGIIK_06080	0.86	-1.0
1,343,385	-		OKGIIK_06080	0.86	-1.0
1,343,385	-		OKGIIK_06080	0.86	-0.4
1,343,385	-		OKGIIK_06080	0.86	+0.2
1,343,588	+				-0.4
1,343,588	+				-3.9
1,343,589	-				-1.4
1,343,589	-				+0.0
1,343,589	-				-0.1
1,343,589	-				+0.9
1,343,589	-				-0.3
1,343,589	-				-0.6
1,343,589	-				-2.2
1,343,589	-				-1.2
1,343,589	-				+0.4
1,343,589	-				+0.0
1,343,634	+	merR	OKGIIK_06085	0.20	+0.3
1,343,634	+	merR	OKGIIK_06085	0.20	-1.2
1,343,634	+	merR	OKGIIK_06085	0.20	-1.2
1,343,634	+	merR	OKGIIK_06085	0.20	+1.3
1,343,635	-	merR	OKGIIK_06085	0.20	-0.6
1,343,816	+	merR	OKGIIK_06085	0.64	-3.0
1,343,816	+	merR	OKGIIK_06085	0.64	+0.6
1,343,816	+	merR	OKGIIK_06085	0.64	-0.4
1,343,817	-	merR	OKGIIK_06085	0.65	-2.4
1,343,824	+	merR	OKGIIK_06085	0.66	-1.0
1,343,843	-	merR	OKGIIK_06085	0.71	-3.1
1,343,882	-	merR	OKGIIK_06085	0.81	-1.4
1,343,960	+				+1.2
1,343,960	+				-2.5
1,343,984	-				-0.7
1,343,991	+				-1.6
1,343,991	+				-0.8
1,343,991	+				+0.6
1,343,996	+				-0.7
1,343,996	+				-1.9
1,343,996	+				-1.9
1,343,996	+				+0.3
1,343,996	+				-1.4
1,343,996	+				-0.7
1,343,996	+				-1.6
1,343,996	+				-1.4
1,343,996	+				-0.4
1,343,996	+				+1.9
1,343,996	+				-1.0
1,343,996	+				-0.2
1,343,996	+				-1.0
1,343,996	+				-1.7
1,343,997	-				-1.0
1,343,997	-				-0.5
1,343,997	-				-1.2
1,343,997	-				+1.6
1,343,997	-				+0.0
1,343,997	-				-1.4
1,343,997	-				+0.4
1,343,997	-				-0.7
1,343,997	-				-1.0
1,343,997	-				-0.7
1,343,997	-				-0.2
1,343,997	-				-1.7
1,344,041	+				-1.5
1,344,041	+				-1.1
1,344,042	-				+0.2
1,344,133	+		OKGIIK_06090	0.24	-0.4
1,344,133	+		OKGIIK_06090	0.24	-1.4
1,344,133	+		OKGIIK_06090	0.24	+1.2
1,344,133	+		OKGIIK_06090	0.24	-0.6
1,344,133	+		OKGIIK_06090	0.24	-0.4
1,344,133	+		OKGIIK_06090	0.24	-1.7
1,344,133	+		OKGIIK_06090	0.24	+0.3
1,344,134	-		OKGIIK_06090	0.24	-0.7
1,344,134	-		OKGIIK_06090	0.24	-0.4
1,344,134	-		OKGIIK_06090	0.24	-1.7
1,344,261	+		OKGIIK_06090	0.44	-1.4
1,344,261	+		OKGIIK_06090	0.44	-1.0
1,344,262	-		OKGIIK_06090	0.44	+0.8
1,344,262	-		OKGIIK_06090	0.44	+0.4
1,344,262	-		OKGIIK_06090	0.44	-0.4
1,344,311	+		OKGIIK_06090	0.52	-1.0
1,344,311	+		OKGIIK_06090	0.52	-0.7
1,344,311	+		OKGIIK_06090	0.52	-1.0
1,344,311	+		OKGIIK_06090	0.52	-1.6
1,344,311	+		OKGIIK_06090	0.52	-1.4
1,344,311	+		OKGIIK_06090	0.52	-0.9
1,344,312	-		OKGIIK_06090	0.52	-0.2
1,344,312	-		OKGIIK_06090	0.52	-0.7
1,344,312	-		OKGIIK_06090	0.52	-1.2
1,344,312	-		OKGIIK_06090	0.52	+0.8
1,344,456	+		OKGIIK_06090	0.74	-2.4
1,344,647	+				-0.4
1,344,698	-				-0.2
1,344,698	-				-1.6
1,344,698	-				+0.0
1,344,879	+		OKGIIK_06095	0.67	-0.9
1,344,879	+		OKGIIK_06095	0.67	-0.0
1,344,880	-		OKGIIK_06095	0.67	+1.6
1,344,950	+				-1.9
1,344,950	+				-2.0
1,344,950	+				-1.7
1,344,950	+				-2.3
1,344,951	-				-0.6
1,344,951	-				+1.0